Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 MIR6779-201ENST00000617283 64 ntBASIC0.31□□□□□ -2.36
VAMP1P23763 MIR330-201ENST00000362196 94 ntBASIC0.3□□□□□ -2.36
VAMP1P23763 RNU6-54P-201ENST00000365563 107 ntBASIC0.3□□□□□ -2.36
VAMP1P23763 RNU6-154P-201ENST00000384306 106 ntBASIC0.29□□□□□ -2.36
VAMP1P23763 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
VAMP1P23763 SNORA75.1-201ENST00000391130 148 ntBASIC0.29□□□□□ -2.36
VAMP1P23763 Y_RNA.593-201ENST00000410292 98 ntBASIC0.29□□□□□ -2.36
VAMP1P23763 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.29□□□□□ -2.36
VAMP1P23763 RNA5SP325-201ENST00000363756 130 ntBASIC0.28□□□□□ -2.36
VAMP1P23763 RNU6-675P-201ENST00000384236 104 ntBASIC0.28□□□□□ -2.36
VAMP1P23763 MIR450A2-201ENST00000385022 100 ntBASIC0.28□□□□□ -2.36
VAMP1P23763 MIR892B-201ENST00000401279 77 ntBASIC0.28□□□□□ -2.36
VAMP1P23763 MIR8087-201ENST00000612745 78 ntBASIC0.28□□□□□ -2.36
VAMP1P23763 SNORD90-201ENST00000391145 111 ntBASIC0.27□□□□□ -2.37
VAMP1P23763 SNORD114-29-201ENST00000364819 70 ntBASIC0.26□□□□□ -2.37
VAMP1P23763 Y_RNA.426-201ENST00000384068 113 ntBASIC0.26□□□□□ -2.37
VAMP1P23763 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
VAMP1P23763 MIR494-201ENST00000349529 81 ntBASIC0.25□□□□□ -2.37
VAMP1P23763 RNU6-208P-201ENST00000362431 107 ntBASIC0.25□□□□□ -2.37
VAMP1P23763 RNU6-242P-201ENST00000384359 107 ntBASIC0.25□□□□□ -2.37
VAMP1P23763 AC097510.1-201ENST00000510945 133 ntBASIC0.25□□□□□ -2.37
VAMP1P23763 Y_RNA.660-201ENST00000516002 120 ntBASIC0.25□□□□□ -2.37
VAMP1P23763 RNU6-782P-201ENST00000516852 104 ntBASIC0.25□□□□□ -2.37
VAMP1P23763 SCARNA11.2-201ENST00000517183 154 ntBASIC0.25□□□□□ -2.37
VAMP1P23763 AC006160.2-201ENST00000637708 154 ntBASIC0.25□□□□□ -2.37
VAMP1P23763 RNU6-1255P-201ENST00000363434 112 ntBASIC0.24□□□□□ -2.37
VAMP1P23763 MIR4773-1-201ENST00000637203 78 ntBASIC0.24□□□□□ -2.37
VAMP1P23763 RNU6-1298P-201ENST00000362456 101 ntBASIC0.23□□□□□ -2.37
VAMP1P23763 Y_RNA.264-201ENST00000364665 102 ntBASIC0.23□□□□□ -2.37
VAMP1P23763 SNORD77.2-201ENST00000391045 68 ntBASIC0.23□□□□□ -2.37
VAMP1P23763 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
VAMP1P23763 MIR548AE1-201ENST00000583292 70 ntBASIC0.23□□□□□ -2.37
VAMP1P23763 AC104408.1-201ENST00000605241 170 ntBASIC0.23□□□□□ -2.37
VAMP1P23763 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
VAMP1P23763 RNA5SP193-201ENST00000410353 107 ntBASIC0.22□□□□□ -2.37
VAMP1P23763 RNU6-274P-201ENST00000459566 107 ntBASIC0.22□□□□□ -2.37
VAMP1P23763 AC023932.2-201ENST00000603176 175 ntBASIC0.22□□□□□ -2.37
VAMP1P23763 Y_RNA.43-201ENST00000362670 111 ntBASIC0.21□□□□□ -2.38
VAMP1P23763 RNA5SP214-201ENST00000363378 118 ntBASIC0.21□□□□□ -2.38
VAMP1P23763 RNA5SP63-201ENST00000391225 112 ntBASIC0.21□□□□□ -2.38
VAMP1P23763 RNU6-1108P-201ENST00000516308 104 ntBASIC0.21□□□□□ -2.38
VAMP1P23763 RNU7-188P-201ENST00000517063 64 ntBASIC0.21□□□□□ -2.38
VAMP1P23763 MIR20A-201ENST00000362279 71 ntBASIC0.2□□□□□ -2.38
VAMP1P23763 Y_RNA.73-201ENST00000362910 113 ntBASIC0.2□□□□□ -2.38
VAMP1P23763 Y_RNA.115-201ENST00000363272 98 ntBASIC0.2□□□□□ -2.38
VAMP1P23763 Y_RNA.371-201ENST00000365591 113 ntBASIC0.2□□□□□ -2.38
VAMP1P23763 MIR652-201ENST00000385278 98 ntBASIC0.2□□□□□ -2.38
VAMP1P23763 AL109933.3-201ENST00000619095 188 ntBASIC0.2□□□□□ -2.38
VAMP1P23763 RNU6-681P-201ENST00000364012 104 ntBASIC0.19□□□□□ -2.38
VAMP1P23763 SNORA24B-201ENST00000384176 131 ntBASIC0.19□□□□□ -2.38
VAMP1P23763 MIR593-201ENST00000384856 100 ntBASIC0.19□□□□□ -2.38
VAMP1P23763 SNORD75.2-201ENST00000408784 58 ntBASIC0.19□□□□□ -2.38
VAMP1P23763 RNU6-380P-201ENST00000410207 107 ntBASIC0.19□□□□□ -2.38
VAMP1P23763 RNA5SP436-201ENST00000516020 115 ntBASIC0.19□□□□□ -2.38
VAMP1P23763 SCARNA17.3-201ENST00000516381 125 ntBASIC0.19□□□□□ -2.38
VAMP1P23763 RNU6-161P-201ENST00000363051 106 ntBASIC0.18□□□□□ -2.38
VAMP1P23763 snoU13.17-201ENST00000458802 104 ntBASIC0.18□□□□□ -2.38
VAMP1P23763 Y_RNA.681-201ENST00000516445 113 ntBASIC0.18□□□□□ -2.38
VAMP1P23763 RNA5SP330-201ENST00000517096 96 ntBASIC0.18□□□□□ -2.38
VAMP1P23763 AC140658.3-201ENST00000567603 271 ntBASIC0.18□□□□□ -2.38
VAMP1P23763 AC022137.1-201ENST00000483735 151 ntBASIC0.17□□□□□ -2.38
VAMP1P23763 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.17□□□□□ -2.38
VAMP1P23763 MIR3925-201ENST00000584674 77 ntBASIC0.17□□□□□ -2.38
VAMP1P23763 MIR4768-201ENST00000585270 74 ntBASIC0.17□□□□□ -2.38
VAMP1P23763 RNU6-495P-201ENST00000362995 107 ntBASIC0.16□□□□□ -2.38
VAMP1P23763 RNA5SP257-201ENST00000363023 116 ntBASIC0.16□□□□□ -2.38
VAMP1P23763 SNORA42.1-201ENST00000363515 137 ntBASIC0.16□□□□□ -2.38
VAMP1P23763 RNU6-497P-201ENST00000365316 104 ntBASIC0.16□□□□□ -2.38
VAMP1P23763 RNU6-820P-201ENST00000384273 107 ntBASIC0.16□□□□□ -2.38
VAMP1P23763 RNA5SP163-201ENST00000410304 99 ntBASIC0.16□□□□□ -2.38
VAMP1P23763 Y_RNA.607-201ENST00000410597 98 ntBASIC0.16□□□□□ -2.38
VAMP1P23763 MIR5588-201ENST00000581890 63 ntBASIC0.16□□□□□ -2.38
VAMP1P23763 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.16□□□□□ -2.38
VAMP1P23763 MIR371B-201ENST00000638082 66 ntBASIC0.15□□□□□ -2.39
VAMP1P23763 RNU6-382P-201ENST00000365181 106 ntBASIC0.14□□□□□ -2.39
VAMP1P23763 RNA5SP299-201ENST00000391203 116 ntBASIC0.14□□□□□ -2.39
VAMP1P23763 AL691482.2-201ENST00000457453 84 ntBASIC0.14□□□□□ -2.39
VAMP1P23763 SNORD114-5-201ENST00000362928 70 ntBASIC0.13□□□□□ -2.39
VAMP1P23763 RNU6-129P-201ENST00000391022 107 ntBASIC0.13□□□□□ -2.39
VAMP1P23763 MIR1295A-201ENST00000408463 79 ntBASIC0.13□□□□□ -2.39
VAMP1P23763 RNU6-592P-201ENST00000411333 103 ntBASIC0.13□□□□□ -2.39
VAMP1P23763 AC244090.1-201ENST00000441884 93 ntBASIC0.13□□□□□ -2.39
VAMP1P23763 RNU7-24P-201ENST00000458867 62 ntBASIC0.13□□□□□ -2.39
VAMP1P23763 SNORD42B-201ENST00000458893 67 ntBASIC0.13□□□□□ -2.39
VAMP1P23763 RNU7-159P-201ENST00000459284 62 ntBASIC0.13□□□□□ -2.39
VAMP1P23763 MIR6514-201ENST00000622549 70 ntBASIC0.13□□□□□ -2.39
VAMP1P23763 Y_RNA.12-201ENST00000362393 112 ntBASIC0.12□□□□□ -2.39
VAMP1P23763 Y_RNA.68-201ENST00000362881 102 ntBASIC0.12□□□□□ -2.39
VAMP1P23763 RNU6-824P-201ENST00000363724 104 ntBASIC0.12□□□□□ -2.39
VAMP1P23763 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.12□□□□□ -2.39
VAMP1P23763 MIR1197-201ENST00000408818 88 ntBASIC0.12□□□□□ -2.39
VAMP1P23763 MIR4743-201ENST00000584576 69 ntBASIC0.12□□□□□ -2.39
VAMP1P23763 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.12□□□□□ -2.39
VAMP1P23763 SNORD114-9-201ENST00000364370 72 ntBASIC0.11□□□□□ -2.39
VAMP1P23763 MIR145-201ENST00000384967 88 ntBASIC0.11□□□□□ -2.39
VAMP1P23763 MIR876-201ENST00000401147 81 ntBASIC0.11□□□□□ -2.39
VAMP1P23763 MIR4514-201ENST00000581410 57 ntBASIC0.11□□□□□ -2.39
VAMP1P23763 YWHAEP3-201ENST00000582767 121 ntBASIC0.11□□□□□ -2.39
VAMP1P23763 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.11□□□□□ -2.39
VAMP1P23763 RNU6-624P-201ENST00000363411 107 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 195.5 ms