Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 MIR4788-201ENST00000639104 80 ntBASIC-0.37□□□□□ -2.47
MMP1P03956 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.38□□□□□ -2.47
MMP1P03956 MIR590-201ENST00000385008 97 ntBASIC-0.38□□□□□ -2.47
MMP1P03956 RNU6-519P-201ENST00000410590 108 ntBASIC-0.38□□□□□ -2.47
MMP1P03956 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.38□□□□□ -2.47
MMP1P03956 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.38□□□□□ -2.47
MMP1P03956 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.38□□□□□ -2.47
MMP1P03956 AP000676.1-201ENST00000533307 52 ntBASIC-0.38□□□□□ -2.47
MMP1P03956 SNORD114-11-201ENST00000363738 75 ntBASIC-0.39□□□□□ -2.47
MMP1P03956 RNU6-106P-201ENST00000384405 107 ntBASIC-0.39□□□□□ -2.47
MMP1P03956 MIR548M-201ENST00000408260 86 ntBASIC-0.39□□□□□ -2.47
MMP1P03956 RNU6-554P-201ENST00000410466 106 ntBASIC-0.39□□□□□ -2.47
MMP1P03956 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.39□□□□□ -2.47
MMP1P03956 MIR4263-201ENST00000584745 83 ntBASIC-0.39□□□□□ -2.47
MMP1P03956 MIR6129-201ENST00000616087 109 ntBASIC-0.39□□□□□ -2.47
MMP1P03956 SNORD115-25-201ENST00000362619 82 ntBASIC-0.4□□□□□ -2.47
MMP1P03956 RNU6-495P-201ENST00000362995 107 ntBASIC-0.4□□□□□ -2.47
MMP1P03956 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.4□□□□□ -2.47
MMP1P03956 SNORA19-201ENST00000384737 128 ntBASIC-0.4□□□□□ -2.47
MMP1P03956 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.4□□□□□ -2.47
MMP1P03956 RNU6-972P-201ENST00000391208 107 ntBASIC-0.4□□□□□ -2.47
MMP1P03956 RNU6-887P-201ENST00000410660 100 ntBASIC-0.4□□□□□ -2.47
MMP1P03956 SNORD114-4-201ENST00000363962 75 ntBASIC-0.41□□□□□ -2.48
MMP1P03956 RNU6-22P-201ENST00000384355 107 ntBASIC-0.41□□□□□ -2.48
MMP1P03956 RNU6-900P-201ENST00000384498 102 ntBASIC-0.41□□□□□ -2.48
MMP1P03956 SNORD56B-201ENST00000384713 71 ntBASIC-0.41□□□□□ -2.48
MMP1P03956 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.41□□□□□ -2.48
MMP1P03956 RNU6-589P-201ENST00000516485 107 ntBASIC-0.41□□□□□ -2.48
MMP1P03956 RNU6-320P-201ENST00000516511 106 ntBASIC-0.41□□□□□ -2.48
MMP1P03956 RNU6-62P-201ENST00000516526 102 ntBASIC-0.41□□□□□ -2.48
MMP1P03956 SNORA18.5-201ENST00000516616 101 ntBASIC-0.41□□□□□ -2.48
MMP1P03956 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.41□□□□□ -2.48
MMP1P03956 MIR1302-5-201ENST00000408164 150 ntBASIC-0.42□□□□□ -2.48
MMP1P03956 RNA5SP451-201ENST00000410588 110 ntBASIC-0.42□□□□□ -2.48
MMP1P03956 RNU7-55P-201ENST00000459426 62 ntBASIC-0.42□□□□□ -2.48
MMP1P03956 RNU7-61P-201ENST00000515897 61 ntBASIC-0.42□□□□□ -2.48
MMP1P03956 RNU6-109P-201ENST00000516364 107 ntBASIC-0.42□□□□□ -2.48
MMP1P03956 RNU6-184P-201ENST00000516514 107 ntBASIC-0.42□□□□□ -2.48
MMP1P03956 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.42□□□□□ -2.48
MMP1P03956 AC026421.1-201ENST00000519101 163 ntBASIC-0.42□□□□□ -2.48
MMP1P03956 MIR8064-201ENST00000612863 90 ntBASIC-0.42□□□□□ -2.48
MMP1P03956 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.43□□□□□ -2.48
MMP1P03956 SNORD14C-201ENST00000365382 88 ntBASIC-0.43□□□□□ -2.48
MMP1P03956 RNU6-30P-201ENST00000384561 107 ntBASIC-0.43□□□□□ -2.48
MMP1P03956 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.43□□□□□ -2.48
MMP1P03956 SNORD126-201ENST00000459475 77 ntBASIC-0.43□□□□□ -2.48
MMP1P03956 RNU6-502P-201ENST00000362419 108 ntBASIC-0.44□□□□□ -2.48
MMP1P03956 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.44□□□□□ -2.48
MMP1P03956 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.44□□□□□ -2.48
MMP1P03956 RPS29P8-201ENST00000445109 171 ntBASIC-0.44□□□□□ -2.48
MMP1P03956 snoU13.13-201ENST00000458842 104 ntBASIC-0.44□□□□□ -2.48
MMP1P03956 RNA5SP66-201ENST00000517178 101 ntBASIC-0.44□□□□□ -2.48
MMP1P03956 RNU4-32P-201ENST00000363404 141 ntBASIC-0.45□□□□□ -2.48
MMP1P03956 SNORD116-10-201ENST00000363791 102 ntBASIC-0.45□□□□□ -2.48
MMP1P03956 MIR196A2-201ENST00000385189 110 ntBASIC-0.45□□□□□ -2.48
MMP1P03956 RNU7-24P-201ENST00000458867 62 ntBASIC-0.45□□□□□ -2.48
MMP1P03956 SNORD2-201ENST00000459163 69 ntBASIC-0.45□□□□□ -2.48
MMP1P03956 MIR3910-1-201ENST00000580936 111 ntBASIC-0.45□□□□□ -2.48
MMP1P03956 RNU6-834P-201ENST00000362367 110 ntBASIC-0.46□□□□□ -2.48
MMP1P03956 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.46□□□□□ -2.48
MMP1P03956 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.46□□□□□ -2.48
MMP1P03956 RNU6-990P-201ENST00000364385 104 ntBASIC-0.46□□□□□ -2.48
MMP1P03956 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.46□□□□□ -2.48
MMP1P03956 SNORD75.2-201ENST00000408784 58 ntBASIC-0.46□□□□□ -2.48
MMP1P03956 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.46□□□□□ -2.48
MMP1P03956 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.46□□□□□ -2.48
MMP1P03956 SNORA40.17-201ENST00000517256 115 ntBASIC-0.46□□□□□ -2.48
MMP1P03956 MIR4280-201ENST00000582178 76 ntBASIC-0.46□□□□□ -2.48
MMP1P03956 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.46□□□□□ -2.48
MMP1P03956 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.46□□□□□ -2.48
MMP1P03956 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.47□□□□□ -2.48
MMP1P03956 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.47□□□□□ -2.48
MMP1P03956 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.47□□□□□ -2.48
MMP1P03956 AC096531.1-201ENST00000419107 107 ntBASIC-0.47□□□□□ -2.48
MMP1P03956 snoU13.17-201ENST00000458802 104 ntBASIC-0.47□□□□□ -2.48
MMP1P03956 RNU6-162P-201ENST00000516228 103 ntBASIC-0.47□□□□□ -2.48
MMP1P03956 RNU6-479P-201ENST00000516348 105 ntBASIC-0.47□□□□□ -2.48
MMP1P03956 MIR4432-201ENST00000581823 84 ntBASIC-0.47□□□□□ -2.48
MMP1P03956 U7.3-201ENST00000616123 62 ntBASIC-0.47□□□□□ -2.48
MMP1P03956 RNA5SP275-201ENST00000363936 118 ntBASIC-0.48□□□□□ -2.49
MMP1P03956 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.48□□□□□ -2.49
MMP1P03956 SNORA63.6-201ENST00000364921 119 ntBASIC-0.48□□□□□ -2.49
MMP1P03956 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.48□□□□□ -2.49
MMP1P03956 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.48□□□□□ -2.49
MMP1P03956 AL445193.1-201ENST00000441183 141 ntBASIC-0.48□□□□□ -2.49
MMP1P03956 RNA5SP169-201ENST00000517268 117 ntBASIC-0.48□□□□□ -2.49
MMP1P03956 RNU6-766P-201ENST00000362478 107 ntBASIC-0.49□□□□□ -2.49
MMP1P03956 RNU6-824P-201ENST00000363724 104 ntBASIC-0.49□□□□□ -2.49
MMP1P03956 RNU6-382P-201ENST00000365181 106 ntBASIC-0.49□□□□□ -2.49
MMP1P03956 SNORD113-1-201ENST00000365321 69 ntBASIC-0.49□□□□□ -2.49
MMP1P03956 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.49□□□□□ -2.49
MMP1P03956 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.49□□□□□ -2.49
MMP1P03956 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.49□□□□□ -2.49
MMP1P03956 RNU6-337P-201ENST00000391243 106 ntBASIC-0.49□□□□□ -2.49
MMP1P03956 RNU6-284P-201ENST00000411105 106 ntBASIC-0.49□□□□□ -2.49
MMP1P03956 MTATP6P29-201ENST00000415057 132 ntBASIC-0.49□□□□□ -2.49
MMP1P03956 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.49□□□□□ -2.49
MMP1P03956 AC093726.3-201ENST00000637588 150 ntBASIC-0.49□□□□□ -2.49
MMP1P03956 AC132825.6-201ENST00000638861 357 ntBASIC-0.49□□□□□ -2.49
MMP1P03956 RNU6-973P-201ENST00000364690 107 ntBASIC-0.5□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 478.6 ms