Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 Y_RNA.507-201ENST00000384500 99 ntBASIC-2.12□□□□□ -2.75
TNFP01375 RNU6-987P-201ENST00000384759 104 ntBASIC-2.12□□□□□ -2.75
TNFP01375 RNU6-908P-201ENST00000410160 94 ntBASIC-2.12□□□□□ -2.75
TNFP01375 MTND1P29-201ENST00000448112 647 ntBASIC-2.12□□□□□ -2.75
TNFP01375 MIR3144-201ENST00000579460 79 ntBASIC-2.12□□□□□ -2.75
TNFP01375 AL359920.1-201ENST00000618332 176 ntBASIC-2.12□□□□□ -2.75
TNFP01375 MIR548U-201ENST00000390728 81 ntBASIC-2.13□□□□□ -2.75
TNFP01375 RNU6-1009P-201ENST00000390996 107 ntBASIC-2.13□□□□□ -2.75
TNFP01375 SNORD113-2-201ENST00000391082 72 ntBASIC-2.13□□□□□ -2.75
TNFP01375 SEPT14P3-201ENST00000439401 183 ntBASIC-2.13□□□□□ -2.75
TNFP01375 AL731563.1-201ENST00000442202 214 ntBASIC-2.13□□□□□ -2.75
TNFP01375 AL732372.2-207ENST00000445840 183 ntBASIC-2.13□□□□□ -2.75
TNFP01375 MTND3P10-201ENST00000450967 341 ntBASIC-2.13□□□□□ -2.75
TNFP01375 SEPT14P2-201ENST00000453405 183 ntBASIC-2.13□□□□□ -2.75
TNFP01375 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-2.13□□□□□ -2.75
TNFP01375 FO082796.1-201ENST00000523795 183 ntBASIC-2.13□□□□□ -2.75
TNFP01375 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-2.13□□□□□ -2.75
TNFP01375 AC005899.2-201ENST00000584353 90 ntBASIC-2.13□□□□□ -2.75
TNFP01375 AC025166.1-201ENST00000612411 163 ntBASIC-2.13□□□□□ -2.75
TNFP01375 AL442128.1-201ENST00000615151 90 ntBASIC-2.13□□□□□ -2.75
TNFP01375 U2.1-201ENST00000618978 145 ntBASIC-2.13□□□□□ -2.75
TNFP01375 RNU6-363P-201ENST00000362895 105 ntBASIC-2.14□□□□□ -2.75
TNFP01375 RNU6-451P-201ENST00000362921 107 ntBASIC-2.14□□□□□ -2.75
TNFP01375 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.14□□□□□ -2.75
TNFP01375 Y_RNA.401-201ENST00000383965 117 ntBASIC-2.14□□□□□ -2.75
TNFP01375 RNU6-381P-201ENST00000391259 108 ntBASIC-2.14□□□□□ -2.75
TNFP01375 AC104985.2-201ENST00000620598 500 ntBASIC-2.14□□□□□ -2.75
TNFP01375 RNU6-770P-201ENST00000363929 105 ntBASIC-2.15□□□□□ -2.75
TNFP01375 RNU6-854P-201ENST00000364036 107 ntBASIC-2.15□□□□□ -2.75
TNFP01375 RNU6-211P-201ENST00000384047 107 ntBASIC-2.15□□□□□ -2.75
TNFP01375 RNU6-1124P-201ENST00000384169 107 ntBASIC-2.15□□□□□ -2.75
TNFP01375 SNORD116-16-201ENST00000384533 92 ntBASIC-2.15□□□□□ -2.75
TNFP01375 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-2.15□□□□□ -2.75
TNFP01375 Y_RNA.693-201ENST00000516641 110 ntBASIC-2.15□□□□□ -2.75
TNFP01375 MIR548V-201ENST00000584165 80 ntBASIC-2.15□□□□□ -2.75
TNFP01375 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-2.15□□□□□ -2.75
TNFP01375 AC024614.3-201ENST00000637860 256 ntBASIC-2.15□□□□□ -2.75
TNFP01375 Y_RNA.47-201ENST00000362697 108 ntBASIC-2.16□□□□□ -2.76
TNFP01375 RNU6-593P-201ENST00000364716 112 ntBASIC-2.16□□□□□ -2.76
TNFP01375 Y_RNA.797-201ENST00000515977 94 ntBASIC-2.16□□□□□ -2.76
TNFP01375 RNU6-911P-201ENST00000516523 104 ntBASIC-2.16□□□□□ -2.76
TNFP01375 RNU6-1018P-201ENST00000516577 106 ntBASIC-2.16□□□□□ -2.76
TNFP01375 AC021753.1-201ENST00000635724 168 ntBASIC-2.16□□□□□ -2.76
TNFP01375 RNU6-1085P-201ENST00000363576 107 ntBASIC-2.17□□□□□ -2.76
TNFP01375 Y_RNA.320-201ENST00000365144 102 ntBASIC-2.17□□□□□ -2.76
TNFP01375 SNORD116-2-201ENST00000384274 95 ntBASIC-2.17□□□□□ -2.76
TNFP01375 MIR548C-201ENST00000384815 97 ntBASIC-2.17□□□□□ -2.76
TNFP01375 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-2.17□□□□□ -2.76
TNFP01375 Y_RNA.604-201ENST00000410574 102 ntBASIC-2.17□□□□□ -2.76
TNFP01375 Y_RNA.657-201ENST00000515983 102 ntBASIC-2.17□□□□□ -2.76
TNFP01375 RNU6-982P-201ENST00000516216 102 ntBASIC-2.17□□□□□ -2.76
TNFP01375 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-2.18□□□□□ -2.76
TNFP01375 RNU6-238P-201ENST00000363313 106 ntBASIC-2.18□□□□□ -2.76
TNFP01375 RNU6-698P-201ENST00000363523 107 ntBASIC-2.18□□□□□ -2.76
TNFP01375 RNU6-1169P-201ENST00000363537 103 ntBASIC-2.18□□□□□ -2.76
TNFP01375 Y_RNA.281-201ENST00000364774 94 ntBASIC-2.18□□□□□ -2.76
TNFP01375 RNU6-34P-201ENST00000364874 107 ntBASIC-2.18□□□□□ -2.76
TNFP01375 RNU6-867P-201ENST00000364956 107 ntBASIC-2.18□□□□□ -2.76
TNFP01375 RNU6-649P-201ENST00000384463 107 ntBASIC-2.18□□□□□ -2.76
TNFP01375 RNU6-310P-201ENST00000384655 107 ntBASIC-2.18□□□□□ -2.76
TNFP01375 Y_RNA.663-201ENST00000516043 101 ntBASIC-2.18□□□□□ -2.76
TNFP01375 RNU7-4P-201ENST00000516961 62 ntBASIC-2.18□□□□□ -2.76
TNFP01375 Y_RNA.158-201ENST00000363651 101 ntBASIC-2.19□□□□□ -2.76
TNFP01375 SNORD115-37-201ENST00000363768 82 ntBASIC-2.19□□□□□ -2.76
TNFP01375 RNU6-668P-201ENST00000364180 107 ntBASIC-2.19□□□□□ -2.76
TNFP01375 Y_RNA.266-201ENST00000364678 96 ntBASIC-2.19□□□□□ -2.76
TNFP01375 RNU6-520P-201ENST00000384717 104 ntBASIC-2.19□□□□□ -2.76
TNFP01375 MTATP6P29-201ENST00000415057 132 ntBASIC-2.19□□□□□ -2.76
TNFP01375 RNU6-1314P-201ENST00000517139 104 ntBASIC-2.19□□□□□ -2.76
TNFP01375 Y_RNA.772-201ENST00000606692 102 ntBASIC-2.19□□□□□ -2.76
TNFP01375 SNORD113-5-201ENST00000607261 78 ntBASIC-2.19□□□□□ -2.76
TNFP01375 MIR548AH-201ENST00000637109 76 ntBASIC-2.19□□□□□ -2.76
TNFP01375 MIR1321-201ENST00000637766 79 ntBASIC-2.19□□□□□ -2.76
TNFP01375 Y_RNA.163-201ENST00000363702 113 ntBASIC-2.2□□□□□ -2.76
TNFP01375 RNU6-361P-201ENST00000364454 107 ntBASIC-2.2□□□□□ -2.76
TNFP01375 MIR630-201ENST00000384957 97 ntBASIC-2.2□□□□□ -2.76
TNFP01375 MIR577-201ENST00000385196 96 ntBASIC-2.2□□□□□ -2.76
TNFP01375 MIR124-1-201ENST00000385275 85 ntBASIC-2.2□□□□□ -2.76
TNFP01375 Y_RNA.605-201ENST00000410577 105 ntBASIC-2.2□□□□□ -2.76
TNFP01375 Y_RNA.612-201ENST00000410717 95 ntBASIC-2.2□□□□□ -2.76
TNFP01375 AL118496.2-201ENST00000448300 230 ntBASIC-2.2□□□□□ -2.76
TNFP01375 Y_RNA.661-201ENST00000516003 99 ntBASIC-2.2□□□□□ -2.76
TNFP01375 RNU6-1046P-201ENST00000516538 107 ntBASIC-2.2□□□□□ -2.76
TNFP01375 MIR548Z-201ENST00000584743 97 ntBASIC-2.2□□□□□ -2.76
TNFP01375 AC124864.2-201ENST00000624736 186 ntBASIC-2.2□□□□□ -2.76
TNFP01375 MIR628-201ENST00000385229 95 ntBASIC-2.21□□□□□ -2.76
TNFP01375 RNU6-780P-201ENST00000391030 104 ntBASIC-2.21□□□□□ -2.76
TNFP01375 SNORA17.4-201ENST00000391287 132 ntBASIC-2.21□□□□□ -2.76
TNFP01375 RNU6-752P-201ENST00000516376 102 ntBASIC-2.21□□□□□ -2.76
TNFP01375 Y_RNA.682-201ENST00000516457 100 ntBASIC-2.21□□□□□ -2.76
TNFP01375 RNU6-307P-201ENST00000516743 106 ntBASIC-2.21□□□□□ -2.76
TNFP01375 AL137067.1-201ENST00000615933 120 ntBASIC-2.21□□□□□ -2.76
TNFP01375 Y_RNA.41-201ENST00000362646 102 ntBASIC-2.22□□□□□ -2.76
TNFP01375 RNU6-330P-201ENST00000363015 107 ntBASIC-2.22□□□□□ -2.76
TNFP01375 RNU6-103P-201ENST00000363686 107 ntBASIC-2.22□□□□□ -2.76
TNFP01375 RNU4-11P-201ENST00000365287 132 ntBASIC-2.22□□□□□ -2.76
TNFP01375 RNU6-1013P-201ENST00000384180 107 ntBASIC-2.22□□□□□ -2.76
TNFP01375 AL162413.1-201ENST00000603198 110 ntBASIC-2.22□□□□□ -2.76
TNFP01375 SNORD113-8-201ENST00000363497 74 ntBASIC-2.23□□□□□ -2.77
TNFP01375 RNU6-737P-201ENST00000365370 107 ntBASIC-2.23□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 192.6 ms