Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.8□□□□□ -2.54
CPSF4O95639 MIR548U-201ENST00000390728 81 ntBASIC-0.8□□□□□ -2.54
CPSF4O95639 RNU6-337P-201ENST00000391243 106 ntBASIC-0.8□□□□□ -2.54
CPSF4O95639 RNU6-592P-201ENST00000411333 103 ntBASIC-0.8□□□□□ -2.54
CPSF4O95639 MTND4LP9-201ENST00000427694 174 ntBASIC-0.8□□□□□ -2.54
CPSF4O95639 AC022137.1-201ENST00000483735 151 ntBASIC-0.8□□□□□ -2.54
CPSF4O95639 RNU6-772P-201ENST00000516042 105 ntBASIC-0.8□□□□□ -2.54
CPSF4O95639 AC068339.1-201ENST00000526965 141 ntBASIC-0.8□□□□□ -2.54
CPSF4O95639 MIR3064-201ENST00000581130 66 ntBASIC-0.8□□□□□ -2.54
CPSF4O95639 MIR4439-201ENST00000583746 80 ntBASIC-0.8□□□□□ -2.54
CPSF4O95639 AL157777.2-201ENST00000258070 137 ntBASIC-0.81□□□□□ -2.54
CPSF4O95639 SNORD74.6-201ENST00000364796 70 ntBASIC-0.81□□□□□ -2.54
CPSF4O95639 MIR517B-201ENST00000385102 67 ntBASIC-0.81□□□□□ -2.54
CPSF4O95639 MIRLET7B-201ENST00000385140 83 ntBASIC-0.81□□□□□ -2.54
CPSF4O95639 RNA5SP266-201ENST00000410273 108 ntBASIC-0.81□□□□□ -2.54
CPSF4O95639 AP000533.3-201ENST00000447704 118 ntBASIC-0.81□□□□□ -2.54
CPSF4O95639 MIR378F-201ENST00000578143 78 ntBASIC-0.81□□□□□ -2.54
CPSF4O95639 AC103810.7-201ENST00000607821 91 ntBASIC-0.81□□□□□ -2.54
CPSF4O95639 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.82□□□□□ -2.54
CPSF4O95639 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.82□□□□□ -2.54
CPSF4O95639 RNU6-990P-201ENST00000364385 104 ntBASIC-0.82□□□□□ -2.54
CPSF4O95639 RNA5SP192-201ENST00000364404 120 ntBASIC-0.82□□□□□ -2.54
CPSF4O95639 SNORD115-23-201ENST00000364461 82 ntBASIC-0.82□□□□□ -2.54
CPSF4O95639 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.82□□□□□ -2.54
CPSF4O95639 SNORD45B-201ENST00000364617 72 ntBASIC-0.82□□□□□ -2.54
CPSF4O95639 RNU6-24P-201ENST00000384440 107 ntBASIC-0.82□□□□□ -2.54
CPSF4O95639 RNU6-644P-201ENST00000391155 98 ntBASIC-0.82□□□□□ -2.54
CPSF4O95639 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.82□□□□□ -2.54
CPSF4O95639 RNU6-182P-201ENST00000516970 105 ntBASIC-0.82□□□□□ -2.54
CPSF4O95639 MIR3115-201ENST00000577915 68 ntBASIC-0.82□□□□□ -2.54
CPSF4O95639 AC104996.3-201ENST00000590718 94 ntBASIC-0.82□□□□□ -2.54
CPSF4O95639 AL353621.2-201ENST00000605340 133 ntBASIC-0.82□□□□□ -2.54
CPSF4O95639 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.83□□□□□ -2.54
CPSF4O95639 SNORA24B-201ENST00000384176 131 ntBASIC-0.83□□□□□ -2.54
CPSF4O95639 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.83□□□□□ -2.54
CPSF4O95639 RNU6-905P-201ENST00000384434 107 ntBASIC-0.83□□□□□ -2.54
CPSF4O95639 RNU6-813P-201ENST00000384691 107 ntBASIC-0.83□□□□□ -2.54
CPSF4O95639 AL500527.2-201ENST00000454105 95 ntBASIC-0.83□□□□□ -2.54
CPSF4O95639 SNORD4B-201ENST00000459083 72 ntBASIC-0.83□□□□□ -2.54
CPSF4O95639 MIR3165-201ENST00000579874 75 ntBASIC-0.83□□□□□ -2.54
CPSF4O95639 MIR4320-201ENST00000636981 65 ntBASIC-0.83□□□□□ -2.54
CPSF4O95639 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.84□□□□□ -2.54
CPSF4O95639 SNORD114-25-201ENST00000363742 72 ntBASIC-0.84□□□□□ -2.54
CPSF4O95639 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.84□□□□□ -2.54
CPSF4O95639 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.84□□□□□ -2.54
CPSF4O95639 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.84□□□□□ -2.54
CPSF4O95639 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.84□□□□□ -2.54
CPSF4O95639 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.84□□□□□ -2.54
CPSF4O95639 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.84□□□□□ -2.54
CPSF4O95639 RNU6-274P-201ENST00000459566 107 ntBASIC-0.84□□□□□ -2.54
CPSF4O95639 MIR5009-201ENST00000578736 100 ntBASIC-0.84□□□□□ -2.54
CPSF4O95639 MIR4499-201ENST00000584834 69 ntBASIC-0.84□□□□□ -2.54
CPSF4O95639 RNU6-886P-201ENST00000384319 105 ntBASIC-0.85□□□□□ -2.55
CPSF4O95639 SNORA40-201ENST00000388090 126 ntBASIC-0.85□□□□□ -2.55
CPSF4O95639 SNORD75.2-201ENST00000408784 58 ntBASIC-0.85□□□□□ -2.55
CPSF4O95639 RNU7-24P-201ENST00000458867 62 ntBASIC-0.85□□□□□ -2.55
CPSF4O95639 RNU7-107P-201ENST00000459121 61 ntBASIC-0.85□□□□□ -2.55
CPSF4O95639 AC021146.9-201ENST00000512503 156 ntBASIC-0.85□□□□□ -2.55
CPSF4O95639 MIR548Z-201ENST00000584743 97 ntBASIC-0.85□□□□□ -2.55
CPSF4O95639 uc_338.19-201ENST00000616808 99 ntBASIC-0.85□□□□□ -2.55
CPSF4O95639 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.86□□□□□ -2.55
CPSF4O95639 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.86□□□□□ -2.55
CPSF4O95639 RNA5SP292-201ENST00000390974 118 ntBASIC-0.86□□□□□ -2.55
CPSF4O95639 SNORD90-201ENST00000391145 111 ntBASIC-0.86□□□□□ -2.55
CPSF4O95639 RNU6-519P-201ENST00000410590 108 ntBASIC-0.86□□□□□ -2.55
CPSF4O95639 RNA5SP461-201ENST00000516451 104 ntBASIC-0.86□□□□□ -2.55
CPSF4O95639 U6.96-201ENST00000636425 70 ntBASIC-0.86□□□□□ -2.55
CPSF4O95639 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.87□□□□□ -2.55
CPSF4O95639 MIR548A1-201ENST00000385041 97 ntBASIC-0.87□□□□□ -2.55
CPSF4O95639 RNU6-257P-201ENST00000410238 98 ntBASIC-0.87□□□□□ -2.55
CPSF4O95639 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.87□□□□□ -2.55
CPSF4O95639 RNU6-62P-201ENST00000516526 102 ntBASIC-0.87□□□□□ -2.55
CPSF4O95639 MIR4777-201ENST00000583710 86 ntBASIC-0.87□□□□□ -2.55
CPSF4O95639 AC099654.10-201ENST00000640395 161 ntBASIC-0.87□□□□□ -2.55
CPSF4O95639 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.88□□□□□ -2.55
CPSF4O95639 SNORD18.2-201ENST00000459604 70 ntBASIC-0.88□□□□□ -2.55
CPSF4O95639 SNORA18.5-201ENST00000516616 101 ntBASIC-0.88□□□□□ -2.55
CPSF4O95639 YWHAEP3-201ENST00000582767 121 ntBASIC-0.88□□□□□ -2.55
CPSF4O95639 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.88□□□□□ -2.55
CPSF4O95639 MIR124-2-201ENST00000385081 109 ntBASIC-0.89□□□□□ -2.55
CPSF4O95639 RNU7-200P-201ENST00000516105 62 ntBASIC-0.89□□□□□ -2.55
CPSF4O95639 RNU6-795P-201ENST00000516323 103 ntBASIC-0.89□□□□□ -2.55
CPSF4O95639 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.89□□□□□ -2.55
CPSF4O95639 AC090617.8-201ENST00000623339 167 ntBASIC-0.89□□□□□ -2.55
CPSF4O95639 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.9□□□□□ -2.55
CPSF4O95639 RNU6-208P-201ENST00000362431 107 ntBASIC-0.9□□□□□ -2.55
CPSF4O95639 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.9□□□□□ -2.55
CPSF4O95639 RNU6-382P-201ENST00000365181 106 ntBASIC-0.9□□□□□ -2.55
CPSF4O95639 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.9□□□□□ -2.55
CPSF4O95639 SNORA62.4-201ENST00000365504 151 ntBASIC-0.9□□□□□ -2.55
CPSF4O95639 SNX3P1X-201ENST00000414887 175 ntBASIC-0.9□□□□□ -2.55
CPSF4O95639 MTATP6P29-201ENST00000415057 132 ntBASIC-0.9□□□□□ -2.55
CPSF4O95639 SNORD33.1-201ENST00000516213 88 ntBASIC-0.9□□□□□ -2.55
CPSF4O95639 AC012531.4-201ENST00000616509 177 ntBASIC-0.9□□□□□ -2.55
CPSF4O95639 MIR3914-2-201ENST00000637339 95 ntBASIC-0.9□□□□□ -2.55
CPSF4O95639 RNU6-971P-201ENST00000516920 106 ntBASIC-0.91□□□□□ -2.56
CPSF4O95639 MIR4719-201ENST00000585233 84 ntBASIC-0.91□□□□□ -2.56
CPSF4O95639 AC006254.2-201ENST00000603259 279 ntBASIC-0.91□□□□□ -2.56
CPSF4O95639 RNU6-431P-201ENST00000383874 107 ntBASIC-0.92□□□□□ -2.56
CPSF4O95639 RNU6-260P-201ENST00000384092 107 ntBASIC-0.92□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 279.5 ms