Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AC244090.1-201ENST00000441884 93 ntBASIC-0.5□□□□□ -2.49
RTN3O95197 snoU13.13-201ENST00000458842 104 ntBASIC-0.5□□□□□ -2.49
RTN3O95197 RNU6-719P-201ENST00000516671 104 ntBASIC-0.5□□□□□ -2.49
RTN3O95197 RNA5SP66-201ENST00000517178 101 ntBASIC-0.5□□□□□ -2.49
RTN3O95197 uc_338.36-201ENST00000622331 158 ntBASIC-0.5□□□□□ -2.49
RTN3O95197 SNORD116-21-201ENST00000384507 92 ntBASIC-0.51□□□□□ -2.49
RTN3O95197 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.51□□□□□ -2.49
RTN3O95197 RNU6-644P-201ENST00000391155 98 ntBASIC-0.51□□□□□ -2.49
RTN3O95197 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.51□□□□□ -2.49
RTN3O95197 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.51□□□□□ -2.49
RTN3O95197 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.51□□□□□ -2.49
RTN3O95197 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.52□□□□□ -2.49
RTN3O95197 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.52□□□□□ -2.49
RTN3O95197 MIR548E-201ENST00000408287 88 ntBASIC-0.52□□□□□ -2.49
RTN3O95197 RNU7-85P-201ENST00000458851 63 ntBASIC-0.52□□□□□ -2.49
RTN3O95197 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.52□□□□□ -2.49
RTN3O95197 SNORD38.3-201ENST00000516599 73 ntBASIC-0.52□□□□□ -2.49
RTN3O95197 AC103810.7-201ENST00000607821 91 ntBASIC-0.52□□□□□ -2.49
RTN3O95197 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.52□□□□□ -2.49
RTN3O95197 RNU6-900P-201ENST00000384498 102 ntBASIC-0.53□□□□□ -2.49
RTN3O95197 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.54□□□□□ -2.5
RTN3O95197 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.54□□□□□ -2.5
RTN3O95197 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.54□□□□□ -2.5
RTN3O95197 MIR5704-201ENST00000584029 77 ntBASIC-0.54□□□□□ -2.5
RTN3O95197 SNORD115-25-201ENST00000362619 82 ntBASIC-0.55□□□□□ -2.5
RTN3O95197 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.55□□□□□ -2.5
RTN3O95197 RNU6-132P-201ENST00000383863 107 ntBASIC-0.55□□□□□ -2.5
RTN3O95197 RNU6-476P-201ENST00000384726 107 ntBASIC-0.55□□□□□ -2.5
RTN3O95197 MIR548U-201ENST00000390728 81 ntBASIC-0.55□□□□□ -2.5
RTN3O95197 RNU7-55P-201ENST00000459426 62 ntBASIC-0.55□□□□□ -2.5
RTN3O95197 AC093726.3-201ENST00000637588 150 ntBASIC-0.55□□□□□ -2.5
RTN3O95197 RNU6-959P-201ENST00000384671 107 ntBASIC-0.56□□□□□ -2.5
RTN3O95197 MT-TR-201ENST00000387439 65 ntBASIC-0.56□□□□□ -2.5
RTN3O95197 SNORA3B-201ENST00000391305 131 ntBASIC-0.56□□□□□ -2.5
RTN3O95197 MIR3140-201ENST00000583685 90 ntBASIC-0.56□□□□□ -2.5
RTN3O95197 MIR8068-201ENST00000618032 68 ntBASIC-0.56□□□□□ -2.5
RTN3O95197 AL391099.1-201ENST00000624635 187 ntBASIC-0.56□□□□□ -2.5
RTN3O95197 SNORD114-4-201ENST00000363962 75 ntBASIC-0.57□□□□□ -2.5
RTN3O95197 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.57□□□□□ -2.5
RTN3O95197 RNU6-901P-201ENST00000384593 106 ntBASIC-0.57□□□□□ -2.5
RTN3O95197 AC008267.6-201ENST00000441664 139 ntBASIC-0.57□□□□□ -2.5
RTN3O95197 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.57□□□□□ -2.5
RTN3O95197 FGF7P7-201ENST00000514120 227 ntBASIC-0.57□□□□□ -2.5
RTN3O95197 MIR4777-201ENST00000583710 86 ntBASIC-0.57□□□□□ -2.5
RTN3O95197 MIR548Z-201ENST00000584743 97 ntBASIC-0.57□□□□□ -2.5
RTN3O95197 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.57□□□□□ -2.5
RTN3O95197 RNU6-502P-201ENST00000362419 108 ntBASIC-0.58□□□□□ -2.5
RTN3O95197 SNORD90-201ENST00000391145 111 ntBASIC-0.58□□□□□ -2.5
RTN3O95197 MIR6851-201ENST00000617060 67 ntBASIC-0.58□□□□□ -2.5
RTN3O95197 SNORD2-201ENST00000459163 69 ntBASIC-0.59□□□□□ -2.5
RTN3O95197 SCARNA23-201ENST00000516060 130 ntBASIC-0.59□□□□□ -2.5
RTN3O95197 RNU6-795P-201ENST00000516323 103 ntBASIC-0.59□□□□□ -2.5
RTN3O95197 AC012531.4-201ENST00000616509 177 ntBASIC-0.59□□□□□ -2.5
RTN3O95197 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.6□□□□□ -2.51
RTN3O95197 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.6□□□□□ -2.51
RTN3O95197 RNU6-721P-201ENST00000410155 105 ntBASIC-0.6□□□□□ -2.51
RTN3O95197 RNU6-519P-201ENST00000410590 108 ntBASIC-0.6□□□□□ -2.51
RTN3O95197 SNORD4B-201ENST00000459083 72 ntBASIC-0.6□□□□□ -2.51
RTN3O95197 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.6□□□□□ -2.51
RTN3O95197 MIR3681-201ENST00000580089 72 ntBASIC-0.6□□□□□ -2.51
RTN3O95197 MIR198-201ENST00000637333 62 ntBASIC-0.6□□□□□ -2.51
RTN3O95197 RNU6-990P-201ENST00000364385 104 ntBASIC-0.61□□□□□ -2.51
RTN3O95197 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.61□□□□□ -2.51
RTN3O95197 RNU6-904P-201ENST00000516206 101 ntBASIC-0.61□□□□□ -2.51
RTN3O95197 MIR3064-201ENST00000581130 66 ntBASIC-0.61□□□□□ -2.51
RTN3O95197 AC104996.3-201ENST00000590718 94 ntBASIC-0.61□□□□□ -2.51
RTN3O95197 MIR204-201ENST00000385200 110 ntBASIC-0.62□□□□□ -2.51
RTN3O95197 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.62□□□□□ -2.51
RTN3O95197 RNU6-972P-201ENST00000391208 107 ntBASIC-0.62□□□□□ -2.51
RTN3O95197 RNU6-337P-201ENST00000391243 106 ntBASIC-0.62□□□□□ -2.51
RTN3O95197 SNORA63.2-201ENST00000362603 126 ntBASIC-0.63□□□□□ -2.51
RTN3O95197 SNORD114-14-201ENST00000362723 75 ntBASIC-0.63□□□□□ -2.51
RTN3O95197 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.63□□□□□ -2.51
RTN3O95197 RNU6-973P-201ENST00000364690 107 ntBASIC-0.63□□□□□ -2.51
RTN3O95197 RNU6-81P-201ENST00000365608 104 ntBASIC-0.63□□□□□ -2.51
RTN3O95197 SNORA24B-201ENST00000384176 131 ntBASIC-0.63□□□□□ -2.51
RTN3O95197 RNU6-905P-201ENST00000384434 107 ntBASIC-0.63□□□□□ -2.51
RTN3O95197 RNA5SP292-201ENST00000390974 118 ntBASIC-0.63□□□□□ -2.51
RTN3O95197 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.63□□□□□ -2.51
RTN3O95197 SNORA40.17-201ENST00000517256 115 ntBASIC-0.63□□□□□ -2.51
RTN3O95197 MIR1302-5-201ENST00000408164 150 ntBASIC-0.64□□□□□ -2.51
RTN3O95197 MIR548M-201ENST00000408260 86 ntBASIC-0.64□□□□□ -2.51
RTN3O95197 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.64□□□□□ -2.51
RTN3O95197 MIR6773-201ENST00000612812 74 ntBASIC-0.64□□□□□ -2.51
RTN3O95197 AC090617.8-201ENST00000623339 167 ntBASIC-0.64□□□□□ -2.51
RTN3O95197 RNU6-495P-201ENST00000362995 107 ntBASIC-0.65□□□□□ -2.51
RTN3O95197 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.65□□□□□ -2.51
RTN3O95197 MIR601-201ENST00000385256 79 ntBASIC-0.65□□□□□ -2.51
RTN3O95197 SNORA19.1-201ENST00000410656 129 ntBASIC-0.65□□□□□ -2.51
RTN3O95197 SNORD22.1-201ENST00000516331 125 ntBASIC-0.65□□□□□ -2.51
RTN3O95197 MIR587-201ENST00000384845 96 ntBASIC-0.66□□□□□ -2.52
RTN3O95197 RNU6-887P-201ENST00000410660 100 ntBASIC-0.66□□□□□ -2.52
RTN3O95197 MIR6854-201ENST00000614935 69 ntBASIC-0.66□□□□□ -2.52
RTN3O95197 MIRLET7B-201ENST00000385140 83 ntBASIC-0.67□□□□□ -2.52
RTN3O95197 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.67□□□□□ -2.52
RTN3O95197 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.67□□□□□ -2.52
RTN3O95197 RNU6-592P-201ENST00000411333 103 ntBASIC-0.67□□□□□ -2.52
RTN3O95197 MIR3179-1-201ENST00000578940 84 ntBASIC-0.67□□□□□ -2.52
RTN3O95197 MIR3179-2-201ENST00000579107 84 ntBASIC-0.67□□□□□ -2.52
RTN3O95197 MIR3179-3-201ENST00000579566 84 ntBASIC-0.67□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 231.5 ms