Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 MIR4529-201ENST00000578110 78 ntBASIC1.96□□□□□ -2.1
GFRA3O60609 MIR6895-201ENST00000613497 78 ntBASIC1.96□□□□□ -2.1
GFRA3O60609 RNU6-716P-201ENST00000365621 103 ntBASIC1.95□□□□□ -2.1
GFRA3O60609 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.95□□□□□ -2.1
GFRA3O60609 SUMO1P4-201ENST00000429430 302 ntBASIC1.95□□□□□ -2.1
GFRA3O60609 RNU7-154P-201ENST00000516194 62 ntBASIC1.95□□□□□ -2.1
GFRA3O60609 RNA5SP102-201ENST00000516865 106 ntBASIC1.95□□□□□ -2.1
GFRA3O60609 RNA5SP47-201ENST00000517230 109 ntBASIC1.95□□□□□ -2.1
GFRA3O60609 MIR8081-201ENST00000611533 95 ntBASIC1.95□□□□□ -2.1
GFRA3O60609 AC022709.1-201ENST00000615967 87 ntBASIC1.95□□□□□ -2.1
GFRA3O60609 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
GFRA3O60609 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
GFRA3O60609 MIR429-201ENST00000362106 83 ntBASIC1.94□□□□□ -2.1
GFRA3O60609 SNORA3A-201ENST00000364113 130 ntBASIC1.94□□□□□ -2.1
GFRA3O60609 RNU6-974P-201ENST00000384099 108 ntBASIC1.94□□□□□ -2.1
GFRA3O60609 RNA5SP212-201ENST00000391223 107 ntBASIC1.94□□□□□ -2.1
GFRA3O60609 RNU6-337P-201ENST00000391243 106 ntBASIC1.94□□□□□ -2.1
GFRA3O60609 SNORD111B-201ENST00000408587 80 ntBASIC1.94□□□□□ -2.1
GFRA3O60609 AC003989.2-201ENST00000440224 169 ntBASIC1.94□□□□□ -2.1
GFRA3O60609 RNU7-193P-201ENST00000516723 65 ntBASIC1.94□□□□□ -2.1
GFRA3O60609 MIR4446-201ENST00000578505 67 ntBASIC1.94□□□□□ -2.1
GFRA3O60609 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.93□□□□□ -2.1
GFRA3O60609 MIR1-1-201ENST00000362147 71 ntBASIC1.93□□□□□ -2.1
GFRA3O60609 SNORD115-25-201ENST00000362619 82 ntBASIC1.93□□□□□ -2.1
GFRA3O60609 SNORD1A-201ENST00000364968 72 ntBASIC1.93□□□□□ -2.1
GFRA3O60609 RNU7-21P-201ENST00000459430 62 ntBASIC1.93□□□□□ -2.1
GFRA3O60609 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.93□□□□□ -2.1
GFRA3O60609 MIR4285-201ENST00000581001 85 ntBASIC1.93□□□□□ -2.1
GFRA3O60609 MIR8074-201ENST00000615081 81 ntBASIC1.93□□□□□ -2.1
GFRA3O60609 MIR8063-201ENST00000621930 81 ntBASIC1.93□□□□□ -2.1
GFRA3O60609 RNU6-485P-201ENST00000363475 107 ntBASIC1.92□□□□□ -2.1
GFRA3O60609 SNORD114-22-201ENST00000365423 72 ntBASIC1.92□□□□□ -2.1
GFRA3O60609 SNORA44.1-201ENST00000517031 108 ntBASIC1.92□□□□□ -2.1
GFRA3O60609 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.92□□□□□ -2.1
GFRA3O60609 FO624990.1-201ENST00000636373 85 ntBASIC1.92□□□□□ -2.1
GFRA3O60609 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
GFRA3O60609 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
GFRA3O60609 RNA5SP276-201ENST00000362580 94 ntBASIC1.91□□□□□ -2.1
GFRA3O60609 Y_RNA.139-201ENST00000363464 102 ntBASIC1.91□□□□□ -2.1
GFRA3O60609 SNORD18A-201ENST00000363753 72 ntBASIC1.91□□□□□ -2.1
GFRA3O60609 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.91□□□□□ -2.1
GFRA3O60609 AL049779.4-201ENST00000604500 156 ntBASIC1.91□□□□□ -2.1
GFRA3O60609 AL162376.1-201ENST00000624117 175 ntBASIC1.91□□□□□ -2.1
GFRA3O60609 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.91□□□□□ -2.1
GFRA3O60609 MIR934-201ENST00000401241 83 ntBASIC1.9□□□□□ -2.11
GFRA3O60609 AL591704.2-201ENST00000421658 181 ntBASIC1.9□□□□□ -2.11
GFRA3O60609 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.9□□□□□ -2.11
GFRA3O60609 MIR598-201ENST00000384868 97 ntBASIC1.89□□□□□ -2.11
GFRA3O60609 MIR1827-201ENST00000408549 66 ntBASIC1.89□□□□□ -2.11
GFRA3O60609 MIR4287-201ENST00000579398 78 ntBASIC1.89□□□□□ -2.11
GFRA3O60609 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
GFRA3O60609 SNORA67.1-201ENST00000364749 141 ntBASIC1.88□□□□□ -2.11
GFRA3O60609 Y_RNA.345-201ENST00000365384 92 ntBASIC1.88□□□□□ -2.11
GFRA3O60609 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
GFRA3O60609 RNU6-1326P-201ENST00000391262 107 ntBASIC1.88□□□□□ -2.11
GFRA3O60609 AC079140.2-201ENST00000506193 142 ntBASIC1.88□□□□□ -2.11
GFRA3O60609 AL512310.8-201ENST00000550183 120 ntBASIC1.88□□□□□ -2.11
GFRA3O60609 MIR4473-201ENST00000583731 91 ntBASIC1.88□□□□□ -2.11
GFRA3O60609 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
GFRA3O60609 SNORD45.2-201ENST00000363552 72 ntBASIC1.87□□□□□ -2.11
GFRA3O60609 MIR548AA1-201ENST00000384971 97 ntBASIC1.87□□□□□ -2.11
GFRA3O60609 RNU6-1262P-201ENST00000516217 96 ntBASIC1.87□□□□□ -2.11
GFRA3O60609 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
GFRA3O60609 MIRLET7G-201ENST00000362280 84 ntBASIC1.86□□□□□ -2.11
GFRA3O60609 Y_RNA.30-201ENST00000362572 97 ntBASIC1.86□□□□□ -2.11
GFRA3O60609 RNU6-1267P-201ENST00000410747 107 ntBASIC1.86□□□□□ -2.11
GFRA3O60609 U7.7-201ENST00000459276 60 ntBASIC1.86□□□□□ -2.11
GFRA3O60609 AC025627.3-201ENST00000582078 182 ntBASIC1.86□□□□□ -2.11
GFRA3O60609 MIR502-201ENST00000606349 86 ntBASIC1.86□□□□□ -2.11
GFRA3O60609 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.85□□□□□ -2.11
GFRA3O60609 MIR9-3-201ENST00000385084 90 ntBASIC1.85□□□□□ -2.11
GFRA3O60609 RNU6-995P-201ENST00000391244 107 ntBASIC1.85□□□□□ -2.11
GFRA3O60609 RNU6-469P-201ENST00000516253 101 ntBASIC1.85□□□□□ -2.11
GFRA3O60609 RNA5SP470-201ENST00000516463 106 ntBASIC1.85□□□□□ -2.11
GFRA3O60609 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
GFRA3O60609 RNA5SP37-201ENST00000365420 130 ntBASIC1.84□□□□□ -2.11
GFRA3O60609 RNU7-90P-201ENST00000459216 62 ntBASIC1.84□□□□□ -2.11
GFRA3O60609 AC104435.1-201ENST00000483483 166 ntBASIC1.84□□□□□ -2.11
GFRA3O60609 RNU1-52P-201ENST00000384190 164 ntBASIC1.83□□□□□ -2.12
GFRA3O60609 SCARNA16.5-201ENST00000517114 183 ntBASIC1.83□□□□□ -2.12
GFRA3O60609 MIR6773-201ENST00000612812 74 ntBASIC1.83□□□□□ -2.12
GFRA3O60609 MTRNR2L9-201ENST00000622562 75 ntBASIC1.83□□□□□ -2.12
GFRA3O60609 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
GFRA3O60609 SNORA80D-201ENST00000384488 135 ntBASIC1.82□□□□□ -2.12
GFRA3O60609 RNU6-1065P-201ENST00000384513 106 ntBASIC1.82□□□□□ -2.12
GFRA3O60609 MIR3937-201ENST00000580135 106 ntBASIC1.82□□□□□ -2.12
GFRA3O60609 7SK.11-201ENST00000615477 250 ntBASIC1.82□□□□□ -2.12
GFRA3O60609 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.82□□□□□ -2.12
GFRA3O60609 MIR144-201ENST00000384886 86 ntBASIC1.81□□□□□ -2.12
GFRA3O60609 snoU13.9-201ENST00000458927 103 ntBASIC1.81□□□□□ -2.12
GFRA3O60609 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.81□□□□□ -2.12
GFRA3O60609 MIR3678-201ENST00000578455 94 ntBASIC1.81□□□□□ -2.12
GFRA3O60609 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
GFRA3O60609 SNORD33-201ENST00000362761 85 ntBASIC1.8□□□□□ -2.12
GFRA3O60609 MIR524-201ENST00000385242 87 ntBASIC1.8□□□□□ -2.12
GFRA3O60609 SNORD110-201ENST00000408189 75 ntBASIC1.8□□□□□ -2.12
GFRA3O60609 SNORD79.1-201ENST00000516069 84 ntBASIC1.8□□□□□ -2.12
GFRA3O60609 RNA5SP82-201ENST00000516707 92 ntBASIC1.8□□□□□ -2.12
GFRA3O60609 RNU1-92P-201ENST00000517017 135 ntBASIC1.8□□□□□ -2.12
GFRA3O60609 MIR4713-201ENST00000582691 75 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 186.8 ms