Protein–RNA interactions for Protein: O43889

CREB3, Cyclic AMP-responsive element-binding protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3O43889 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.08□□□□□ -2.58
CREB3O43889 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.08□□□□□ -2.58
CREB3O43889 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.08□□□□□ -2.58
CREB3O43889 MIR8068-201ENST00000618032 68 ntBASIC-1.08□□□□□ -2.58
CREB3O43889 AC025521.1-201ENST00000621624 286 ntBASIC-1.08□□□□□ -2.58
CREB3O43889 RNU4-32P-201ENST00000363404 141 ntBASIC-1.1□□□□□ -2.59
CREB3O43889 snosnR66.1-201ENST00000391095 99 ntBASIC-1.1□□□□□ -2.59
CREB3O43889 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.1□□□□□ -2.59
CREB3O43889 RNU6-75P-201ENST00000515944 104 ntBASIC-1.1□□□□□ -2.59
CREB3O43889 AC068339.1-201ENST00000526965 141 ntBASIC-1.1□□□□□ -2.59
CREB3O43889 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.1□□□□□ -2.59
CREB3O43889 AL035470.1-201ENST00000622571 220 ntBASIC-1.1□□□□□ -2.59
CREB3O43889 snoR1.1-201ENST00000628177 80 ntBASIC-1.1□□□□□ -2.59
CREB3O43889 SNORD50.2-201ENST00000365465 70 ntBASIC-1.11□□□□□ -2.59
CREB3O43889 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.11□□□□□ -2.59
CREB3O43889 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.11□□□□□ -2.59
CREB3O43889 SNORD42B-201ENST00000458893 67 ntBASIC-1.12□□□□□ -2.59
CREB3O43889 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.12□□□□□ -2.59
CREB3O43889 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.13□□□□□ -2.59
CREB3O43889 MIR548U-201ENST00000390728 81 ntBASIC-1.13□□□□□ -2.59
CREB3O43889 RNU6-257P-201ENST00000410238 98 ntBASIC-1.13□□□□□ -2.59
CREB3O43889 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.13□□□□□ -2.59
CREB3O43889 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.13□□□□□ -2.59
CREB3O43889 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.14□□□□□ -2.59
CREB3O43889 RNU6-905P-201ENST00000384434 107 ntBASIC-1.14□□□□□ -2.59
CREB3O43889 AL513043.2-201ENST00000573941 143 ntBASIC-1.14□□□□□ -2.59
CREB3O43889 MIR6773-201ENST00000612812 74 ntBASIC-1.14□□□□□ -2.59
CREB3O43889 MIR6738-201ENST00000619620 64 ntBASIC-1.14□□□□□ -2.59
CREB3O43889 MIR4320-201ENST00000636981 65 ntBASIC-1.14□□□□□ -2.59
CREB3O43889 AL500527.2-201ENST00000454105 95 ntBASIC-1.15□□□□□ -2.59
CREB3O43889 RNY1P5-201ENST00000383890 115 ntBASIC-1.16□□□□□ -2.6
CREB3O43889 RNU6-10P-201ENST00000384036 107 ntBASIC-1.16□□□□□ -2.6
CREB3O43889 RNU6-592P-201ENST00000411333 103 ntBASIC-1.16□□□□□ -2.6
CREB3O43889 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.16□□□□□ -2.6
CREB3O43889 SNORD18.2-201ENST00000459604 70 ntBASIC-1.16□□□□□ -2.6
CREB3O43889 RNU6-719P-201ENST00000516671 104 ntBASIC-1.16□□□□□ -2.6
CREB3O43889 MIR4324-201ENST00000584846 72 ntBASIC-1.16□□□□□ -2.6
CREB3O43889 MIR198-201ENST00000637333 62 ntBASIC-1.16□□□□□ -2.6
CREB3O43889 SNORD64-201ENST00000386683 67 ntBASIC-1.17□□□□□ -2.6
CREB3O43889 U6.95-201ENST00000636931 70 ntBASIC-1.17□□□□□ -2.6
CREB3O43889 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.18□□□□□ -2.6
CREB3O43889 RNU6-431P-201ENST00000383874 107 ntBASIC-1.18□□□□□ -2.6
CREB3O43889 RNU6-644P-201ENST00000391155 98 ntBASIC-1.18□□□□□ -2.6
CREB3O43889 FGF7P7-201ENST00000514120 227 ntBASIC-1.18□□□□□ -2.6
CREB3O43889 MIR5009-201ENST00000578736 100 ntBASIC-1.18□□□□□ -2.6
CREB3O43889 uc_338.19-201ENST00000616808 99 ntBASIC-1.18□□□□□ -2.6
CREB3O43889 SNORD115-23-201ENST00000364461 82 ntBASIC-1.19□□□□□ -2.6
CREB3O43889 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.19□□□□□ -2.6
CREB3O43889 MIRLET7B-201ENST00000385140 83 ntBASIC-1.19□□□□□ -2.6
CREB3O43889 RNU6-337P-201ENST00000391243 106 ntBASIC-1.19□□□□□ -2.6
CREB3O43889 AC140658.3-201ENST00000567603 271 ntBASIC-1.19□□□□□ -2.6
CREB3O43889 MIR3914-2-201ENST00000637339 95 ntBASIC-1.19□□□□□ -2.6
CREB3O43889 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.2□□□□□ -2.6
CREB3O43889 SNORA63.6-201ENST00000364921 119 ntBASIC-1.2□□□□□ -2.6
CREB3O43889 RNU6-813P-201ENST00000384691 107 ntBASIC-1.2□□□□□ -2.6
CREB3O43889 MIR147A-201ENST00000385079 72 ntBASIC-1.2□□□□□ -2.6
CREB3O43889 MIR601-201ENST00000385256 79 ntBASIC-1.2□□□□□ -2.6
CREB3O43889 RNU7-107P-201ENST00000459121 61 ntBASIC-1.2□□□□□ -2.6
CREB3O43889 MIR4499-201ENST00000584834 69 ntBASIC-1.2□□□□□ -2.6
CREB3O43889 RNU6-80P-201ENST00000384195 107 ntBASIC-1.21□□□□□ -2.6
CREB3O43889 RNU6-24P-201ENST00000384440 107 ntBASIC-1.21□□□□□ -2.6
CREB3O43889 RNA5SP470-201ENST00000516463 106 ntBASIC-1.21□□□□□ -2.6
CREB3O43889 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.21□□□□□ -2.6
CREB3O43889 MIR378F-201ENST00000578143 78 ntBASIC-1.21□□□□□ -2.6
CREB3O43889 MIR124-2-201ENST00000385081 109 ntBASIC-1.22□□□□□ -2.6
CREB3O43889 MIR548A3-201ENST00000385297 97 ntBASIC-1.22□□□□□ -2.6
CREB3O43889 RNU7-85P-201ENST00000458851 63 ntBASIC-1.22□□□□□ -2.6
CREB3O43889 RNU6-274P-201ENST00000459566 107 ntBASIC-1.22□□□□□ -2.6
CREB3O43889 RNU6-971P-201ENST00000516920 106 ntBASIC-1.22□□□□□ -2.6
CREB3O43889 MIR4723-201ENST00000585070 81 ntBASIC-1.22□□□□□ -2.6
CREB3O43889 SNORA63.2-201ENST00000362603 126 ntBASIC-1.24□□□□□ -2.61
CREB3O43889 SNORA62.4-201ENST00000365504 151 ntBASIC-1.24□□□□□ -2.61
CREB3O43889 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.24□□□□□ -2.61
CREB3O43889 AC090425.1-201ENST00000610007 140 ntBASIC-1.24□□□□□ -2.61
CREB3O43889 MIR382-201ENST00000637119 76 ntBASIC-1.24□□□□□ -2.61
CREB3O43889 RNU6-495P-201ENST00000362995 107 ntBASIC-1.25□□□□□ -2.61
CREB3O43889 SNORD114-17-201ENST00000364699 75 ntBASIC-1.25□□□□□ -2.61
CREB3O43889 MIR548A1-201ENST00000385041 97 ntBASIC-1.25□□□□□ -2.61
CREB3O43889 AL078595.1-201ENST00000404458 226 ntBASIC-1.25□□□□□ -2.61
CREB3O43889 RNU6-794P-201ENST00000517261 64 ntBASIC-1.25□□□□□ -2.61
CREB3O43889 YWHAEP3-201ENST00000582767 121 ntBASIC-1.25□□□□□ -2.61
CREB3O43889 AC103810.7-201ENST00000607821 91 ntBASIC-1.25□□□□□ -2.61
CREB3O43889 RNU6-208P-201ENST00000362431 107 ntBASIC-1.26□□□□□ -2.61
CREB3O43889 SCARNA18B-201ENST00000458806 135 ntBASIC-1.26□□□□□ -2.61
CREB3O43889 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.27□□□□□ -2.61
CREB3O43889 SNORD33.1-201ENST00000516213 88 ntBASIC-1.27□□□□□ -2.61
CREB3O43889 snoU83B.1-201ENST00000517136 88 ntBASIC-1.27□□□□□ -2.61
CREB3O43889 MIR3613-201ENST00000579844 87 ntBASIC-1.27□□□□□ -2.61
CREB3O43889 U6.96-201ENST00000636425 70 ntBASIC-1.27□□□□□ -2.61
CREB3O43889 RNU6-990P-201ENST00000364385 104 ntBASIC-1.28□□□□□ -2.61
CREB3O43889 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.28□□□□□ -2.61
CREB3O43889 MIR3140-201ENST00000583685 90 ntBASIC-1.28□□□□□ -2.61
CREB3O43889 AC104996.3-201ENST00000590718 94 ntBASIC-1.28□□□□□ -2.61
CREB3O43889 RNA5SP192-201ENST00000364404 120 ntBASIC-1.29□□□□□ -2.62
CREB3O43889 RNU6-132P-201ENST00000383863 107 ntBASIC-1.29□□□□□ -2.62
CREB3O43889 RNU6-519P-201ENST00000410590 108 ntBASIC-1.29□□□□□ -2.62
CREB3O43889 AC021146.9-201ENST00000512503 156 ntBASIC-1.29□□□□□ -2.62
CREB3O43889 RNU6-346P-201ENST00000516288 111 ntBASIC-1.29□□□□□ -2.62
CREB3O43889 MIR3064-201ENST00000581130 66 ntBASIC-1.29□□□□□ -2.62
CREB3O43889 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.3□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 167.4 ms