Protein–RNA interactions for Protein: O43639

NCK2, Cytoplasmic protein NCK2, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK2O43639 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.13□□□□□ -2.43
NCK2O43639 SNORD114-4-201ENST00000363962 75 ntBASIC-0.13□□□□□ -2.43
NCK2O43639 SNORD114-15-201ENST00000364687 72 ntBASIC-0.13□□□□□ -2.43
NCK2O43639 RNU6-46P-201ENST00000383860 107 ntBASIC-0.13□□□□□ -2.43
NCK2O43639 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.13□□□□□ -2.43
NCK2O43639 MIR6514-201ENST00000622549 70 ntBASIC-0.13□□□□□ -2.43
NCK2O43639 RNU6-132P-201ENST00000383863 107 ntBASIC-0.14□□□□□ -2.43
NCK2O43639 RNU6-154P-201ENST00000384306 106 ntBASIC-0.14□□□□□ -2.43
NCK2O43639 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.14□□□□□ -2.43
NCK2O43639 RNU6-109P-201ENST00000516364 107 ntBASIC-0.14□□□□□ -2.43
NCK2O43639 RNU6-184P-201ENST00000516514 107 ntBASIC-0.14□□□□□ -2.43
NCK2O43639 RNU6-919P-201ENST00000516731 104 ntBASIC-0.14□□□□□ -2.43
NCK2O43639 MIR4493-201ENST00000584016 73 ntBASIC-0.14□□□□□ -2.43
NCK2O43639 AP001180.6-201ENST00000584918 159 ntBASIC-0.14□□□□□ -2.43
NCK2O43639 MIR20A-201ENST00000362279 71 ntBASIC-0.15□□□□□ -2.43
NCK2O43639 SNORA63.2-201ENST00000362603 126 ntBASIC-0.15□□□□□ -2.43
NCK2O43639 Y_RNA.291-201ENST00000364886 113 ntBASIC-0.15□□□□□ -2.43
NCK2O43639 RNU6-215P-201ENST00000365169 102 ntBASIC-0.15□□□□□ -2.43
NCK2O43639 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.15□□□□□ -2.43
NCK2O43639 MIR106A-201ENST00000384870 81 ntBASIC-0.15□□□□□ -2.43
NCK2O43639 RNU7-188P-201ENST00000517063 64 ntBASIC-0.15□□□□□ -2.43
NCK2O43639 MTATP8P2-201ENST00000435212 202 ntBASIC-0.16□□□□□ -2.44
NCK2O43639 MIR548AE1-201ENST00000583292 70 ntBASIC-0.16□□□□□ -2.44
NCK2O43639 SNORA32.1-201ENST00000364514 115 ntBASIC-0.17□□□□□ -2.44
NCK2O43639 MIR214-201ENST00000385214 110 ntBASIC-0.17□□□□□ -2.44
NCK2O43639 AC244090.1-201ENST00000441884 93 ntBASIC-0.17□□□□□ -2.44
NCK2O43639 MIR4645-201ENST00000583158 77 ntBASIC-0.17□□□□□ -2.44
NCK2O43639 U7.3-201ENST00000616123 62 ntBASIC-0.17□□□□□ -2.44
NCK2O43639 MIR604-201ENST00000384880 94 ntBASIC-0.18□□□□□ -2.44
NCK2O43639 RNU6-929P-201ENST00000384429 107 ntBASIC-0.19□□□□□ -2.44
NCK2O43639 MTATP6P29-201ENST00000415057 132 ntBASIC-0.19□□□□□ -2.44
NCK2O43639 SNORD2-201ENST00000459163 69 ntBASIC-0.19□□□□□ -2.44
NCK2O43639 FGF7P7-201ENST00000514120 227 ntBASIC-0.19□□□□□ -2.44
NCK2O43639 SNORA18.1-201ENST00000363418 128 ntBASIC-0.2□□□□□ -2.44
NCK2O43639 RNA5SP368-201ENST00000364298 116 ntBASIC-0.2□□□□□ -2.44
NCK2O43639 RNU6-30P-201ENST00000384561 107 ntBASIC-0.2□□□□□ -2.44
NCK2O43639 RN7SL660P-201ENST00000614852 299 ntBASIC-0.2□□□□□ -2.44
NCK2O43639 SNORA40.13-201ENST00000516379 120 ntBASIC-0.21□□□□□ -2.44
NCK2O43639 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.21□□□□□ -2.44
NCK2O43639 MIR450A1-201ENST00000362262 91 ntBASIC-0.22□□□□□ -2.44
NCK2O43639 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.22□□□□□ -2.44
NCK2O43639 SNORD20-201ENST00000384550 80 ntBASIC-0.22□□□□□ -2.44
NCK2O43639 MIR652-201ENST00000385278 98 ntBASIC-0.22□□□□□ -2.44
NCK2O43639 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.22□□□□□ -2.44
NCK2O43639 SNORA18.5-201ENST00000516616 101 ntBASIC-0.22□□□□□ -2.44
NCK2O43639 MIR1236-201ENST00000408340 102 ntBASIC-0.23□□□□□ -2.45
NCK2O43639 AC026421.1-201ENST00000519101 163 ntBASIC-0.23□□□□□ -2.45
NCK2O43639 AC108676.2-201ENST00000605225 163 ntBASIC-0.23□□□□□ -2.45
NCK2O43639 RNU6-54P-201ENST00000365563 107 ntBASIC-0.24□□□□□ -2.45
NCK2O43639 RNU6-32P-201ENST00000383948 107 ntBASIC-0.24□□□□□ -2.45
NCK2O43639 RNU6-13P-201ENST00000384248 107 ntBASIC-0.24□□□□□ -2.45
NCK2O43639 RNU6-12P-201ENST00000384604 107 ntBASIC-0.24□□□□□ -2.45
NCK2O43639 RNU6-41P-201ENST00000384741 107 ntBASIC-0.24□□□□□ -2.45
NCK2O43639 RNA5SP292-201ENST00000390974 118 ntBASIC-0.24□□□□□ -2.45
NCK2O43639 AP001318.4-201ENST00000616637 121 ntBASIC-0.24□□□□□ -2.45
NCK2O43639 RNU4-32P-201ENST00000363404 141 ntBASIC-0.25□□□□□ -2.45
NCK2O43639 AL035461.1-201ENST00000421490 332 ntBASIC-0.25□□□□□ -2.45
NCK2O43639 RNU5F-1-201ENST00000362507 117 ntBASIC-0.26□□□□□ -2.45
NCK2O43639 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.26□□□□□ -2.45
NCK2O43639 RNU6-162P-201ENST00000516228 103 ntBASIC-0.26□□□□□ -2.45
NCK2O43639 RNU6-719P-201ENST00000516671 104 ntBASIC-0.26□□□□□ -2.45
NCK2O43639 RNU6-175P-201ENST00000516896 107 ntBASIC-0.26□□□□□ -2.45
NCK2O43639 MIR101-1-201ENST00000362265 75 ntBASIC-0.27□□□□□ -2.45
NCK2O43639 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.27□□□□□ -2.45
NCK2O43639 SNORA24B-201ENST00000384176 131 ntBASIC-0.27□□□□□ -2.45
NCK2O43639 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.27□□□□□ -2.45
NCK2O43639 RNU7-24P-201ENST00000458867 62 ntBASIC-0.27□□□□□ -2.45
NCK2O43639 SNORD4A-201ENST00000459174 72 ntBASIC-0.28□□□□□ -2.45
NCK2O43639 RNU6-495P-201ENST00000362995 107 ntBASIC-0.29□□□□□ -2.46
NCK2O43639 SNORD114-28-201ENST00000363610 72 ntBASIC-0.29□□□□□ -2.46
NCK2O43639 MIR3140-201ENST00000583685 90 ntBASIC-0.29□□□□□ -2.46
NCK2O43639 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.3□□□□□ -2.46
NCK2O43639 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.3□□□□□ -2.46
NCK2O43639 MIR4796-201ENST00000580742 81 ntBASIC-0.3□□□□□ -2.46
NCK2O43639 SNORD95.1-201ENST00000364099 68 ntBASIC-0.31□□□□□ -2.46
NCK2O43639 SNORD49B-201ENST00000365172 72 ntBASIC-0.31□□□□□ -2.46
NCK2O43639 SNORD75.2-201ENST00000408784 58 ntBASIC-0.31□□□□□ -2.46
NCK2O43639 RNA5SP451-201ENST00000410588 110 ntBASIC-0.31□□□□□ -2.46
NCK2O43639 MIR3666-201ENST00000607845 111 ntBASIC-0.31□□□□□ -2.46
NCK2O43639 SNORA63.4-201ENST00000362763 126 ntBASIC-0.32□□□□□ -2.46
NCK2O43639 RNU6-147P-201ENST00000383983 107 ntBASIC-0.32□□□□□ -2.46
NCK2O43639 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.32□□□□□ -2.46
NCK2O43639 RNA5SP67-201ENST00000516422 131 ntBASIC-0.32□□□□□ -2.46
NCK2O43639 MIR4263-201ENST00000584745 83 ntBASIC-0.32□□□□□ -2.46
NCK2O43639 AC006254.2-201ENST00000603259 279 ntBASIC-0.32□□□□□ -2.46
NCK2O43639 SNORD114-12-201ENST00000365400 75 ntBASIC-0.33□□□□□ -2.46
NCK2O43639 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.33□□□□□ -2.46
NCK2O43639 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.33□□□□□ -2.46
NCK2O43639 RPS29P8-201ENST00000445109 171 ntBASIC-0.33□□□□□ -2.46
NCK2O43639 MIR6507-201ENST00000613630 70 ntBASIC-0.33□□□□□ -2.46
NCK2O43639 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.34□□□□□ -2.46
NCK2O43639 SNORD42B-201ENST00000458893 67 ntBASIC-0.34□□□□□ -2.46
NCK2O43639 AC097510.1-201ENST00000510945 133 ntBASIC-0.34□□□□□ -2.46
NCK2O43639 RNU6-762P-201ENST00000517107 102 ntBASIC-0.34□□□□□ -2.46
NCK2O43639 MALAT1.1-201ENST00000618249 95 ntBASIC-0.34□□□□□ -2.46
NCK2O43639 MIR519C-201ENST00000385053 87 ntBASIC-0.35□□□□□ -2.47
NCK2O43639 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.35□□□□□ -2.47
NCK2O43639 MIR8064-201ENST00000612863 90 ntBASIC-0.35□□□□□ -2.47
NCK2O43639 AC244250.2-201ENST00000418731 148 ntBASIC-0.36□□□□□ -2.47
NCK2O43639 SNORD116-22-201ENST00000384430 92 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 416.7 ms