Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 HMGN2P22-201ENST00000427588 175 ntBASIC0.49□□□□□ -2.33
TRAV20A0A0B4J274 RNU7-129P-201ENST00000516128 62 ntBASIC0.49□□□□□ -2.33
TRAV20A0A0B4J274 MIR5087-201ENST00000635826 76 ntBASIC0.49□□□□□ -2.33
TRAV20A0A0B4J274 SNORD114-23-201ENST00000363536 72 ntBASIC0.48□□□□□ -2.33
TRAV20A0A0B4J274 Y_RNA.316-201ENST00000365118 111 ntBASIC0.48□□□□□ -2.33
TRAV20A0A0B4J274 RNA5SP128-201ENST00000365305 116 ntBASIC0.48□□□□□ -2.33
TRAV20A0A0B4J274 Y_RNA.437-201ENST00000384113 113 ntBASIC0.48□□□□□ -2.33
TRAV20A0A0B4J274 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.48□□□□□ -2.33
TRAV20A0A0B4J274 AL157398.1-201ENST00000452981 186 ntBASIC0.48□□□□□ -2.33
TRAV20A0A0B4J274 RNU6-557P-201ENST00000516842 110 ntBASIC0.48□□□□□ -2.33
TRAV20A0A0B4J274 Y_RNA.125-201ENST00000363371 111 ntBASIC0.47□□□□□ -2.33
TRAV20A0A0B4J274 MIR193B-201ENST00000384907 83 ntBASIC0.47□□□□□ -2.33
TRAV20A0A0B4J274 AC073261.1-201ENST00000429409 121 ntBASIC0.47□□□□□ -2.33
TRAV20A0A0B4J274 MIR4711-201ENST00000578274 70 ntBASIC0.47□□□□□ -2.33
TRAV20A0A0B4J274 AC243829.3-201ENST00000622177 108 ntBASIC0.47□□□□□ -2.33
TRAV20A0A0B4J274 AC010487.4-201ENST00000637027 61 ntBASIC0.47□□□□□ -2.33
TRAV20A0A0B4J274 AC090625.1-201ENST00000357130 210 ntBASIC0.46□□□□□ -2.34
TRAV20A0A0B4J274 SNORA9.1-201ENST00000362412 131 ntBASIC0.46□□□□□ -2.34
TRAV20A0A0B4J274 RNA5SP62-201ENST00000363457 110 ntBASIC0.46□□□□□ -2.34
TRAV20A0A0B4J274 Y_RNA.205-201ENST00000364128 113 ntBASIC0.46□□□□□ -2.34
TRAV20A0A0B4J274 RNU6-573P-201ENST00000383938 106 ntBASIC0.46□□□□□ -2.34
TRAV20A0A0B4J274 Y_RNA.407-201ENST00000383986 113 ntBASIC0.46□□□□□ -2.34
TRAV20A0A0B4J274 SNORA72.7-201ENST00000516349 94 ntBASIC0.46□□□□□ -2.34
TRAV20A0A0B4J274 MIR4666B-201ENST00000578142 81 ntBASIC0.46□□□□□ -2.34
TRAV20A0A0B4J274 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
TRAV20A0A0B4J274 RNU6-495P-201ENST00000362995 107 ntBASIC0.45□□□□□ -2.34
TRAV20A0A0B4J274 RNU6-824P-201ENST00000363724 104 ntBASIC0.45□□□□□ -2.34
TRAV20A0A0B4J274 RNU6-478P-201ENST00000363904 110 ntBASIC0.45□□□□□ -2.34
TRAV20A0A0B4J274 Y_RNA.258-201ENST00000364613 105 ntBASIC0.45□□□□□ -2.34
TRAV20A0A0B4J274 RNU6-652P-201ENST00000365488 107 ntBASIC0.45□□□□□ -2.34
TRAV20A0A0B4J274 MIR501-201ENST00000390204 84 ntBASIC0.45□□□□□ -2.34
TRAV20A0A0B4J274 uc_338.10-201ENST00000621872 182 ntBASIC0.45□□□□□ -2.34
TRAV20A0A0B4J274 RNU6-686P-201ENST00000364839 107 ntBASIC0.44□□□□□ -2.34
TRAV20A0A0B4J274 Y_RNA.371-201ENST00000365591 113 ntBASIC0.44□□□□□ -2.34
TRAV20A0A0B4J274 RNU6-815P-201ENST00000384080 113 ntBASIC0.44□□□□□ -2.34
TRAV20A0A0B4J274 SNORD75.2-201ENST00000408784 58 ntBASIC0.44□□□□□ -2.34
TRAV20A0A0B4J274 MIR1273G-201ENST00000577677 100 ntBASIC0.44□□□□□ -2.34
TRAV20A0A0B4J274 MIR499B-201ENST00000636498 73 ntBASIC0.44□□□□□ -2.34
TRAV20A0A0B4J274 MIR4773-1-201ENST00000637203 78 ntBASIC0.44□□□□□ -2.34
TRAV20A0A0B4J274 Y_RNA.12-201ENST00000362393 112 ntBASIC0.43□□□□□ -2.34
TRAV20A0A0B4J274 RNU6-1327P-201ENST00000365302 105 ntBASIC0.43□□□□□ -2.34
TRAV20A0A0B4J274 SNORD42B-201ENST00000458893 67 ntBASIC0.43□□□□□ -2.34
TRAV20A0A0B4J274 YWHAEP3-201ENST00000582767 121 ntBASIC0.43□□□□□ -2.34
TRAV20A0A0B4J274 MIR548AE1-201ENST00000583292 70 ntBASIC0.43□□□□□ -2.34
TRAV20A0A0B4J274 U6.81-201ENST00000612550 106 ntBASIC0.43□□□□□ -2.34
TRAV20A0A0B4J274 RNU6-382P-201ENST00000365181 106 ntBASIC0.42□□□□□ -2.34
TRAV20A0A0B4J274 RNA5SP193-201ENST00000410353 107 ntBASIC0.42□□□□□ -2.34
TRAV20A0A0B4J274 AC114737.2-201ENST00000421583 173 ntBASIC0.42□□□□□ -2.34
TRAV20A0A0B4J274 RNU7-24P-201ENST00000458867 62 ntBASIC0.42□□□□□ -2.34
TRAV20A0A0B4J274 MIR4677-201ENST00000584153 80 ntBASIC0.42□□□□□ -2.34
TRAV20A0A0B4J274 MIR548AD-201ENST00000584780 82 ntBASIC0.42□□□□□ -2.34
TRAV20A0A0B4J274 MIR3202-2-201ENST00000635980 79 ntBASIC0.42□□□□□ -2.34
TRAV20A0A0B4J274 MIR1245B-201ENST00000636115 69 ntBASIC0.42□□□□□ -2.34
TRAV20A0A0B4J274 SNORD114-4-201ENST00000363962 75 ntBASIC0.41□□□□□ -2.34
TRAV20A0A0B4J274 RNU6-787P-201ENST00000384032 107 ntBASIC0.41□□□□□ -2.34
TRAV20A0A0B4J274 Y_RNA.606-201ENST00000410579 103 ntBASIC0.41□□□□□ -2.34
TRAV20A0A0B4J274 AC069113.3-201ENST00000521019 150 ntBASIC0.41□□□□□ -2.34
TRAV20A0A0B4J274 AC243829.6-201ENST00000612652 106 ntBASIC0.41□□□□□ -2.34
TRAV20A0A0B4J274 MIRLET7A1-201ENST00000362295 80 ntBASIC0.4□□□□□ -2.35
TRAV20A0A0B4J274 RNU6-315P-201ENST00000362666 107 ntBASIC0.4□□□□□ -2.35
TRAV20A0A0B4J274 RNA5SP499-201ENST00000363982 119 ntBASIC0.4□□□□□ -2.35
TRAV20A0A0B4J274 RNU6-340P-201ENST00000364005 107 ntBASIC0.4□□□□□ -2.35
TRAV20A0A0B4J274 RNU6-681P-201ENST00000364012 104 ntBASIC0.4□□□□□ -2.35
TRAV20A0A0B4J274 Y_RNA.219-201ENST00000364232 113 ntBASIC0.4□□□□□ -2.35
TRAV20A0A0B4J274 MIR516B1-201ENST00000385211 90 ntBASIC0.4□□□□□ -2.35
TRAV20A0A0B4J274 RNU6-380P-201ENST00000410207 107 ntBASIC0.4□□□□□ -2.35
TRAV20A0A0B4J274 RNU6-274P-201ENST00000459566 107 ntBASIC0.4□□□□□ -2.35
TRAV20A0A0B4J274 Y_RNA.313-201ENST00000365095 103 ntBASIC0.39□□□□□ -2.35
TRAV20A0A0B4J274 SNORA50A-201ENST00000384225 134 ntBASIC0.39□□□□□ -2.35
TRAV20A0A0B4J274 RNU6-154P-201ENST00000384306 106 ntBASIC0.39□□□□□ -2.35
TRAV20A0A0B4J274 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.39□□□□□ -2.35
TRAV20A0A0B4J274 MIR924-201ENST00000638017 53 ntBASIC0.39□□□□□ -2.35
TRAV20A0A0B4J274 MIR652-201ENST00000385278 98 ntBASIC0.38□□□□□ -2.35
TRAV20A0A0B4J274 RNA5SP325-201ENST00000363756 130 ntBASIC0.37□□□□□ -2.35
TRAV20A0A0B4J274 VTRNA1-3-201ENST00000365645 89 ntBASIC0.37□□□□□ -2.35
TRAV20A0A0B4J274 AC108740.1-201ENST00000498629 225 ntBASIC0.37□□□□□ -2.35
TRAV20A0A0B4J274 RNA5SP134-201ENST00000516492 96 ntBASIC0.37□□□□□ -2.35
TRAV20A0A0B4J274 MIR4712-201ENST00000583750 82 ntBASIC0.37□□□□□ -2.35
TRAV20A0A0B4J274 RNU6-1124P-201ENST00000384169 107 ntBASIC0.36□□□□□ -2.35
TRAV20A0A0B4J274 RNU6-127P-201ENST00000390897 107 ntBASIC0.36□□□□□ -2.35
TRAV20A0A0B4J274 RNU6-303P-201ENST00000517091 106 ntBASIC0.36□□□□□ -2.35
TRAV20A0A0B4J274 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.36□□□□□ -2.35
TRAV20A0A0B4J274 AC084368.1-201ENST00000620935 65 ntBASIC0.36□□□□□ -2.35
TRAV20A0A0B4J274 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.35□□□□□ -2.35
TRAV20A0A0B4J274 SCARNA17.3-201ENST00000516381 125 ntBASIC0.35□□□□□ -2.35
TRAV20A0A0B4J274 MIR330-201ENST00000362196 94 ntBASIC0.34□□□□□ -2.36
TRAV20A0A0B4J274 RNU6-1094P-201ENST00000362416 104 ntBASIC0.34□□□□□ -2.36
TRAV20A0A0B4J274 AL691482.2-201ENST00000457453 84 ntBASIC0.34□□□□□ -2.36
TRAV20A0A0B4J274 MIR4315-1-201ENST00000636800 73 ntBASIC0.34□□□□□ -2.36
TRAV20A0A0B4J274 MIR4315-2-201ENST00000640925 73 ntBASIC0.34□□□□□ -2.36
TRAV20A0A0B4J274 RNU6-228P-201ENST00000362700 106 ntBASIC0.33□□□□□ -2.36
TRAV20A0A0B4J274 SNORD78.1-201ENST00000390866 65 ntBASIC0.33□□□□□ -2.36
TRAV20A0A0B4J274 MIR3925-201ENST00000584674 77 ntBASIC0.33□□□□□ -2.36
TRAV20A0A0B4J274 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
TRAV20A0A0B4J274 Y_RNA.94-201ENST00000363068 106 ntBASIC0.32□□□□□ -2.36
TRAV20A0A0B4J274 SNORD114-29-201ENST00000364819 70 ntBASIC0.32□□□□□ -2.36
TRAV20A0A0B4J274 RNU6-1039P-201ENST00000383931 107 ntBASIC0.32□□□□□ -2.36
TRAV20A0A0B4J274 MIR643-201ENST00000385267 97 ntBASIC0.32□□□□□ -2.36
TRAV20A0A0B4J274 RNU7-188P-201ENST00000517063 64 ntBASIC0.32□□□□□ -2.36
TRAV20A0A0B4J274 MIR8087-201ENST00000612745 78 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 232.9 ms