Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 AC104408.1-201ENST00000605241 170 ntBASIC0.08□□□□□ -2.4
LSM4Q9Y4Z0 MIR6759-201ENST00000638110 65 ntBASIC0.08□□□□□ -2.4
LSM4Q9Y4Z0 SNORD114-16-201ENST00000363044 70 ntBASIC0.07□□□□□ -2.4
LSM4Q9Y4Z0 SNORA19-201ENST00000384737 128 ntBASIC0.07□□□□□ -2.4
LSM4Q9Y4Z0 MIR590-201ENST00000385008 97 ntBASIC0.07□□□□□ -2.4
LSM4Q9Y4Z0 MIR216B-201ENST00000390186 82 ntBASIC0.07□□□□□ -2.4
LSM4Q9Y4Z0 MIR892B-201ENST00000401279 77 ntBASIC0.07□□□□□ -2.4
LSM4Q9Y4Z0 RNU6-1057P-201ENST00000517162 102 ntBASIC0.07□□□□□ -2.4
LSM4Q9Y4Z0 MIR4460-201ENST00000577862 86 ntBASIC0.07□□□□□ -2.4
LSM4Q9Y4Z0 MIR643-201ENST00000385267 97 ntBASIC0.06□□□□□ -2.4
LSM4Q9Y4Z0 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.06□□□□□ -2.4
LSM4Q9Y4Z0 SNORA25.13-201ENST00000516395 103 ntBASIC0.06□□□□□ -2.4
LSM4Q9Y4Z0 MIR4768-201ENST00000585270 74 ntBASIC0.06□□□□□ -2.4
LSM4Q9Y4Z0 Y_RNA.818-201ENST00000618813 71 ntBASIC0.06□□□□□ -2.4
LSM4Q9Y4Z0 Y_RNA.239-201ENST00000364444 113 ntBASIC0.05□□□□□ -2.4
LSM4Q9Y4Z0 RNU6-1325P-201ENST00000364905 105 ntBASIC0.05□□□□□ -2.4
LSM4Q9Y4Z0 RNU6-302P-201ENST00000365249 107 ntBASIC0.05□□□□□ -2.4
LSM4Q9Y4Z0 RNU6-756P-201ENST00000383997 107 ntBASIC0.05□□□□□ -2.4
LSM4Q9Y4Z0 MT-TY-201ENST00000387409 66 ntBASIC0.05□□□□□ -2.4
LSM4Q9Y4Z0 RNU7-85P-201ENST00000458851 63 ntBASIC0.05□□□□□ -2.4
LSM4Q9Y4Z0 MIR4636-201ENST00000582271 80 ntBASIC0.05□□□□□ -2.4
LSM4Q9Y4Z0 RNU6-161P-201ENST00000363051 106 ntBASIC0.04□□□□□ -2.4
LSM4Q9Y4Z0 Y_RNA.93-201ENST00000363066 109 ntBASIC0.04□□□□□ -2.4
LSM4Q9Y4Z0 SNORD58A-201ENST00000383875 65 ntBASIC0.04□□□□□ -2.4
LSM4Q9Y4Z0 RNY4P18-201ENST00000391107 89 ntBASIC0.04□□□□□ -2.4
LSM4Q9Y4Z0 RNU6-935P-201ENST00000410371 100 ntBASIC0.04□□□□□ -2.4
LSM4Q9Y4Z0 RNU6-887P-201ENST00000410660 100 ntBASIC0.04□□□□□ -2.4
LSM4Q9Y4Z0 Y_RNA.660-201ENST00000516002 120 ntBASIC0.04□□□□□ -2.4
LSM4Q9Y4Z0 YWHAEP2-201ENST00000580066 112 ntBASIC0.04□□□□□ -2.4
LSM4Q9Y4Z0 MIR3925-201ENST00000584674 77 ntBASIC0.04□□□□□ -2.4
LSM4Q9Y4Z0 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.03□□□□□ -2.4
LSM4Q9Y4Z0 RNU6-766P-201ENST00000362478 107 ntBASIC0.03□□□□□ -2.4
LSM4Q9Y4Z0 MIR548H2-201ENST00000408874 88 ntBASIC0.03□□□□□ -2.4
LSM4Q9Y4Z0 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.03□□□□□ -2.4
LSM4Q9Y4Z0 MIR371B-201ENST00000638082 66 ntBASIC0.03□□□□□ -2.4
LSM4Q9Y4Z0 RNU6-1290P-201ENST00000362957 109 ntBASIC0.02□□□□□ -2.41
LSM4Q9Y4Z0 SNORD4B-201ENST00000459083 72 ntBASIC0.02□□□□□ -2.41
LSM4Q9Y4Z0 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.02□□□□□ -2.41
LSM4Q9Y4Z0 MIR548AI-201ENST00000579940 88 ntBASIC0.02□□□□□ -2.41
LSM4Q9Y4Z0 uc_338.10-201ENST00000621872 182 ntBASIC0.02□□□□□ -2.41
LSM4Q9Y4Z0 Y_RNA.107-201ENST00000363190 121 ntBASIC0.01□□□□□ -2.41
LSM4Q9Y4Z0 Y_RNA.185-201ENST00000363894 100 ntBASIC0.01□□□□□ -2.41
LSM4Q9Y4Z0 MIR145-201ENST00000384967 88 ntBASIC0.01□□□□□ -2.41
LSM4Q9Y4Z0 U3.27-201ENST00000391237 200 ntBASIC0.01□□□□□ -2.41
LSM4Q9Y4Z0 RNU6-109P-201ENST00000516364 107 ntBASIC0.01□□□□□ -2.41
LSM4Q9Y4Z0 Y_RNA.677-201ENST00000516401 85 ntBASIC0.01□□□□□ -2.41
LSM4Q9Y4Z0 RNU6-184P-201ENST00000516514 107 ntBASIC0.01□□□□□ -2.41
LSM4Q9Y4Z0 MIR5589-201ENST00000579442 60 ntBASIC0.01□□□□□ -2.41
LSM4Q9Y4Z0 AC084368.1-201ENST00000620935 65 ntBASIC0.01□□□□□ -2.41
LSM4Q9Y4Z0 MIR6086-201ENST00000638065 55 ntBASIC0.01□□□□□ -2.41
LSM4Q9Y4Z0 RNU6V-201ENST00000384105 107 ntBASIC0□□□□□ -2.41
LSM4Q9Y4Z0 MIR516B1-201ENST00000385211 90 ntBASIC0□□□□□ -2.41
LSM4Q9Y4Z0 SNORA75.1-201ENST00000391130 148 ntBASIC0□□□□□ -2.41
LSM4Q9Y4Z0 RNU6-519P-201ENST00000410590 108 ntBASIC0□□□□□ -2.41
LSM4Q9Y4Z0 HAR1A.1-201ENST00000459583 118 ntBASIC0□□□□□ -2.41
LSM4Q9Y4Z0 SCARNA11.2-201ENST00000517183 154 ntBASIC0□□□□□ -2.41
LSM4Q9Y4Z0 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
LSM4Q9Y4Z0 MIR4290-201ENST00000583807 95 ntBASIC0□□□□□ -2.41
LSM4Q9Y4Z0 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.01□□□□□ -2.41
LSM4Q9Y4Z0 MIR593-201ENST00000384856 100 ntBASIC-0.01□□□□□ -2.41
LSM4Q9Y4Z0 MIR548U-201ENST00000390728 81 ntBASIC-0.01□□□□□ -2.41
LSM4Q9Y4Z0 MIR876-201ENST00000401147 81 ntBASIC-0.01□□□□□ -2.41
LSM4Q9Y4Z0 AL031737.1-201ENST00000450125 223 ntBASIC-0.01□□□□□ -2.41
LSM4Q9Y4Z0 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.01□□□□□ -2.41
LSM4Q9Y4Z0 MIR548O2-201ENST00000616090 70 ntBASIC-0.01□□□□□ -2.41
LSM4Q9Y4Z0 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.02□□□□□ -2.41
LSM4Q9Y4Z0 SNORD116-10-201ENST00000363791 102 ntBASIC-0.02□□□□□ -2.41
LSM4Q9Y4Z0 MIR1265-201ENST00000408444 86 ntBASIC-0.02□□□□□ -2.41
LSM4Q9Y4Z0 MIR4473-201ENST00000583731 91 ntBASIC-0.02□□□□□ -2.41
LSM4Q9Y4Z0 U2.22-201ENST00000636441 106 ntBASIC-0.02□□□□□ -2.41
LSM4Q9Y4Z0 SNORD114-5-201ENST00000362928 70 ntBASIC-0.03□□□□□ -2.41
LSM4Q9Y4Z0 RNU6-755P-201ENST00000364400 103 ntBASIC-0.03□□□□□ -2.41
LSM4Q9Y4Z0 Y_RNA.291-201ENST00000364886 113 ntBASIC-0.03□□□□□ -2.41
LSM4Q9Y4Z0 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.03□□□□□ -2.41
LSM4Q9Y4Z0 MIR451A-201ENST00000385059 72 ntBASIC-0.03□□□□□ -2.41
LSM4Q9Y4Z0 RNU7-61P-201ENST00000515897 61 ntBASIC-0.03□□□□□ -2.41
LSM4Q9Y4Z0 RNU6-180P-201ENST00000516697 61 ntBASIC-0.03□□□□□ -2.41
LSM4Q9Y4Z0 RNU6-158P-201ENST00000517104 100 ntBASIC-0.03□□□□□ -2.41
LSM4Q9Y4Z0 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.03□□□□□ -2.41
LSM4Q9Y4Z0 SNORD114-31-201ENST00000363219 75 ntBASIC-0.04□□□□□ -2.42
LSM4Q9Y4Z0 RNU6-215P-201ENST00000365169 102 ntBASIC-0.04□□□□□ -2.42
LSM4Q9Y4Z0 RNU6-132P-201ENST00000383863 107 ntBASIC-0.04□□□□□ -2.42
LSM4Q9Y4Z0 MIR3064-201ENST00000581130 66 ntBASIC-0.04□□□□□ -2.42
LSM4Q9Y4Z0 RNA5SP368-201ENST00000364298 116 ntBASIC-0.05□□□□□ -2.42
LSM4Q9Y4Z0 SNORD20-201ENST00000384550 80 ntBASIC-0.05□□□□□ -2.42
LSM4Q9Y4Z0 RNU7-165P-201ENST00000458864 60 ntBASIC-0.05□□□□□ -2.42
LSM4Q9Y4Z0 RNU6-919P-201ENST00000516731 104 ntBASIC-0.05□□□□□ -2.42
LSM4Q9Y4Z0 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.05□□□□□ -2.42
LSM4Q9Y4Z0 MIR2052-201ENST00000636055 55 ntBASIC-0.05□□□□□ -2.42
LSM4Q9Y4Z0 SNORA32.1-201ENST00000364514 115 ntBASIC-0.06□□□□□ -2.42
LSM4Q9Y4Z0 RNU6-30P-201ENST00000384561 107 ntBASIC-0.06□□□□□ -2.42
LSM4Q9Y4Z0 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
LSM4Q9Y4Z0 MTATP8P2-201ENST00000435212 202 ntBASIC-0.06□□□□□ -2.42
LSM4Q9Y4Z0 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.06□□□□□ -2.42
LSM4Q9Y4Z0 AC104996.3-201ENST00000590718 94 ntBASIC-0.06□□□□□ -2.42
LSM4Q9Y4Z0 RNU6-811P-201ENST00000384069 107 ntBASIC-0.07□□□□□ -2.42
LSM4Q9Y4Z0 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.07□□□□□ -2.42
LSM4Q9Y4Z0 RNA5SP163-201ENST00000410304 99 ntBASIC-0.07□□□□□ -2.42
LSM4Q9Y4Z0 RNU7-159P-201ENST00000459284 62 ntBASIC-0.07□□□□□ -2.42
LSM4Q9Y4Z0 MIR548AE1-201ENST00000583292 70 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 194.2 ms