Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 SNORD114-2-201ENST00000363953 78 ntBASIC0.76□□□□□ -2.29
KCMF1Q9P0J7 RNY4P3-201ENST00000365254 95 ntBASIC0.76□□□□□ -2.29
KCMF1Q9P0J7 RNU6-269P-201ENST00000391077 97 ntBASIC0.76□□□□□ -2.29
KCMF1Q9P0J7 PVT1_3.1-201ENST00000620853 95 ntBASIC0.76□□□□□ -2.29
KCMF1Q9P0J7 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
KCMF1Q9P0J7 SNORA63.2-201ENST00000362603 126 ntBASIC0.75□□□□□ -2.29
KCMF1Q9P0J7 RNU6-652P-201ENST00000365488 107 ntBASIC0.75□□□□□ -2.29
KCMF1Q9P0J7 Y_RNA.540-201ENST00000384638 111 ntBASIC0.75□□□□□ -2.29
KCMF1Q9P0J7 MIR598-201ENST00000384868 97 ntBASIC0.75□□□□□ -2.29
KCMF1Q9P0J7 MIR7-2-201ENST00000384970 110 ntBASIC0.75□□□□□ -2.29
KCMF1Q9P0J7 RNA5SP480-201ENST00000516840 109 ntBASIC0.75□□□□□ -2.29
KCMF1Q9P0J7 SNORA25.18-201ENST00000607153 114 ntBASIC0.75□□□□□ -2.29
KCMF1Q9P0J7 RNU5F-1-201ENST00000362507 117 ntBASIC0.74□□□□□ -2.29
KCMF1Q9P0J7 AL450471.1-201ENST00000447509 127 ntBASIC0.74□□□□□ -2.29
KCMF1Q9P0J7 CYP3A137P-201ENST00000562436 69 ntBASIC0.74□□□□□ -2.29
KCMF1Q9P0J7 MIR4666B-201ENST00000578142 81 ntBASIC0.74□□□□□ -2.29
KCMF1Q9P0J7 AL590095.2-201ENST00000604136 117 ntBASIC0.74□□□□□ -2.29
KCMF1Q9P0J7 AL162376.1-201ENST00000624117 175 ntBASIC0.74□□□□□ -2.29
KCMF1Q9P0J7 RNU6-624P-201ENST00000363411 107 ntBASIC0.73□□□□□ -2.29
KCMF1Q9P0J7 Y_RNA.219-201ENST00000364232 113 ntBASIC0.73□□□□□ -2.29
KCMF1Q9P0J7 Y_RNA.316-201ENST00000365118 111 ntBASIC0.73□□□□□ -2.29
KCMF1Q9P0J7 RNU6-787P-201ENST00000384032 107 ntBASIC0.73□□□□□ -2.29
KCMF1Q9P0J7 MIR3202-2-201ENST00000635980 79 ntBASIC0.73□□□□□ -2.29
KCMF1Q9P0J7 RNU6-161P-201ENST00000363051 106 ntBASIC0.72□□□□□ -2.29
KCMF1Q9P0J7 Y_RNA.313-201ENST00000365095 103 ntBASIC0.72□□□□□ -2.29
KCMF1Q9P0J7 RNU6-1124P-201ENST00000384169 107 ntBASIC0.72□□□□□ -2.29
KCMF1Q9P0J7 U3.27-201ENST00000391237 200 ntBASIC0.72□□□□□ -2.29
KCMF1Q9P0J7 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.72□□□□□ -2.29
KCMF1Q9P0J7 snoU13.17-201ENST00000458802 104 ntBASIC0.72□□□□□ -2.29
KCMF1Q9P0J7 RNU6-1108P-201ENST00000516308 104 ntBASIC0.72□□□□□ -2.29
KCMF1Q9P0J7 MIR5000-201ENST00000577717 103 ntBASIC0.72□□□□□ -2.29
KCMF1Q9P0J7 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
KCMF1Q9P0J7 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
KCMF1Q9P0J7 RNU6-129P-201ENST00000391022 107 ntBASIC0.71□□□□□ -2.3
KCMF1Q9P0J7 SNORA40.8-201ENST00000411034 126 ntBASIC0.71□□□□□ -2.3
KCMF1Q9P0J7 SNORD71-201ENST00000411292 86 ntBASIC0.71□□□□□ -2.3
KCMF1Q9P0J7 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.71□□□□□ -2.3
KCMF1Q9P0J7 MIR6866-201ENST00000638146 69 ntBASIC0.71□□□□□ -2.3
KCMF1Q9P0J7 RNU6-208P-201ENST00000362431 107 ntBASIC0.7□□□□□ -2.3
KCMF1Q9P0J7 RNU6-228P-201ENST00000362700 106 ntBASIC0.7□□□□□ -2.3
KCMF1Q9P0J7 RNU1-141P-201ENST00000364623 158 ntBASIC0.7□□□□□ -2.3
KCMF1Q9P0J7 MIR216B-201ENST00000390186 82 ntBASIC0.7□□□□□ -2.3
KCMF1Q9P0J7 SNORD78.1-201ENST00000390866 65 ntBASIC0.7□□□□□ -2.3
KCMF1Q9P0J7 SNORD77.2-201ENST00000391045 68 ntBASIC0.7□□□□□ -2.3
KCMF1Q9P0J7 RNA5SP484-201ENST00000458857 111 ntBASIC0.7□□□□□ -2.3
KCMF1Q9P0J7 MIR4752-201ENST00000579672 72 ntBASIC0.7□□□□□ -2.3
KCMF1Q9P0J7 MIR6835-201ENST00000621552 64 ntBASIC0.7□□□□□ -2.3
KCMF1Q9P0J7 AC069271.1-201ENST00000445577 156 ntBASIC0.69□□□□□ -2.3
KCMF1Q9P0J7 NAMPTP3-201ENST00000569273 224 ntBASIC0.69□□□□□ -2.3
KCMF1Q9P0J7 MIR4460-201ENST00000577862 86 ntBASIC0.69□□□□□ -2.3
KCMF1Q9P0J7 SNORD118-201ENST00000363593 134 ntBASIC0.68□□□□□ -2.3
KCMF1Q9P0J7 RNU6-478P-201ENST00000363904 110 ntBASIC0.68□□□□□ -2.3
KCMF1Q9P0J7 RNU6-945P-201ENST00000383947 107 ntBASIC0.68□□□□□ -2.3
KCMF1Q9P0J7 MIR518A1-201ENST00000385068 85 ntBASIC0.68□□□□□ -2.3
KCMF1Q9P0J7 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.68□□□□□ -2.3
KCMF1Q9P0J7 AC093423.1-201ENST00000440817 142 ntBASIC0.68□□□□□ -2.3
KCMF1Q9P0J7 RNU4-54P-201ENST00000516428 129 ntBASIC0.68□□□□□ -2.3
KCMF1Q9P0J7 Y_RNA.36-201ENST00000362602 112 ntBASIC0.67□□□□□ -2.3
KCMF1Q9P0J7 SNORD114-26-201ENST00000363543 72 ntBASIC0.67□□□□□ -2.3
KCMF1Q9P0J7 SNORA24B-201ENST00000384176 131 ntBASIC0.67□□□□□ -2.3
KCMF1Q9P0J7 MIR1255A-201ENST00000408338 113 ntBASIC0.67□□□□□ -2.3
KCMF1Q9P0J7 RNU6-557P-201ENST00000516842 110 ntBASIC0.67□□□□□ -2.3
KCMF1Q9P0J7 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.67□□□□□ -2.3
KCMF1Q9P0J7 MIR4714-201ENST00000580728 77 ntBASIC0.67□□□□□ -2.3
KCMF1Q9P0J7 AC073869.9-201ENST00000641610 120 ntBASIC0.67□□□□□ -2.3
KCMF1Q9P0J7 MIR508-201ENST00000384857 115 ntBASIC0.66□□□□□ -2.3
KCMF1Q9P0J7 Y_RNA.660-201ENST00000516002 120 ntBASIC0.66□□□□□ -2.3
KCMF1Q9P0J7 MIR548O2-201ENST00000616090 70 ntBASIC0.66□□□□□ -2.3
KCMF1Q9P0J7 MIR6779-201ENST00000617283 64 ntBASIC0.66□□□□□ -2.3
KCMF1Q9P0J7 Y_RNA.264-201ENST00000364665 102 ntBASIC0.65□□□□□ -2.31
KCMF1Q9P0J7 RNU6-686P-201ENST00000364839 107 ntBASIC0.65□□□□□ -2.31
KCMF1Q9P0J7 RNU6V-201ENST00000384105 107 ntBASIC0.65□□□□□ -2.31
KCMF1Q9P0J7 MT-TY-201ENST00000387409 66 ntBASIC0.65□□□□□ -2.31
KCMF1Q9P0J7 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
KCMF1Q9P0J7 RNU6-1177P-201ENST00000391058 104 ntBASIC0.65□□□□□ -2.31
KCMF1Q9P0J7 AC006210.1-201ENST00000424882 111 ntBASIC0.65□□□□□ -2.31
KCMF1Q9P0J7 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
KCMF1Q9P0J7 AC097510.1-201ENST00000510945 133 ntBASIC0.64□□□□□ -2.31
KCMF1Q9P0J7 MIR4712-201ENST00000583750 82 ntBASIC0.64□□□□□ -2.31
KCMF1Q9P0J7 SNORA70.25-201ENST00000612741 95 ntBASIC0.64□□□□□ -2.31
KCMF1Q9P0J7 Y_RNA.12-201ENST00000362393 112 ntBASIC0.63□□□□□ -2.31
KCMF1Q9P0J7 RNU6-54P-201ENST00000365563 107 ntBASIC0.63□□□□□ -2.31
KCMF1Q9P0J7 Y_RNA.371-201ENST00000365591 113 ntBASIC0.63□□□□□ -2.31
KCMF1Q9P0J7 Y_RNA.423-201ENST00000384057 113 ntBASIC0.63□□□□□ -2.31
KCMF1Q9P0J7 SNORD110-201ENST00000408189 75 ntBASIC0.63□□□□□ -2.31
KCMF1Q9P0J7 RNA5SP225-201ENST00000410874 135 ntBASIC0.63□□□□□ -2.31
KCMF1Q9P0J7 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.63□□□□□ -2.31
KCMF1Q9P0J7 RNU5B-6P-201ENST00000516765 68 ntBASIC0.63□□□□□ -2.31
KCMF1Q9P0J7 AC018659.1-201ENST00000551083 169 ntBASIC0.63□□□□□ -2.31
KCMF1Q9P0J7 YWHAEP2-201ENST00000580066 112 ntBASIC0.63□□□□□ -2.31
KCMF1Q9P0J7 MIRLET7A1-201ENST00000362295 80 ntBASIC0.62□□□□□ -2.31
KCMF1Q9P0J7 RNU6-315P-201ENST00000362666 107 ntBASIC0.62□□□□□ -2.31
KCMF1Q9P0J7 Y_RNA.94-201ENST00000363068 106 ntBASIC0.62□□□□□ -2.31
KCMF1Q9P0J7 RNU6-824P-201ENST00000363724 104 ntBASIC0.62□□□□□ -2.31
KCMF1Q9P0J7 RNU2-59P-201ENST00000410482 191 ntBASIC0.62□□□□□ -2.31
KCMF1Q9P0J7 AC098934.3-201ENST00000430450 190 ntBASIC0.62□□□□□ -2.31
KCMF1Q9P0J7 AC069503.3-201ENST00000618674 145 ntBASIC0.62□□□□□ -2.31
KCMF1Q9P0J7 Y_RNA.258-201ENST00000364613 105 ntBASIC0.61□□□□□ -2.31
KCMF1Q9P0J7 MIR216A-201ENST00000385063 110 ntBASIC0.61□□□□□ -2.31
KCMF1Q9P0J7 MIR4773-1-201ENST00000637203 78 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 982.4 ms