Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 RNU6-844P-201ENST00000517175 102 ntBASIC0.31□□□□□ -2.36
ABCF3Q9NUQ8 RNA5SP62-201ENST00000363457 110 ntBASIC0.3□□□□□ -2.36
ABCF3Q9NUQ8 RNU6-1327P-201ENST00000365302 105 ntBASIC0.3□□□□□ -2.36
ABCF3Q9NUQ8 VTRNA1-3-201ENST00000365645 89 ntBASIC0.3□□□□□ -2.36
ABCF3Q9NUQ8 SNORA2A-201ENST00000383885 135 ntBASIC0.3□□□□□ -2.36
ABCF3Q9NUQ8 MIR501-201ENST00000390204 84 ntBASIC0.3□□□□□ -2.36
ABCF3Q9NUQ8 Y_RNA.620-201ENST00000411009 88 ntBASIC0.3□□□□□ -2.36
ABCF3Q9NUQ8 HMGN2P22-201ENST00000427588 175 ntBASIC0.3□□□□□ -2.36
ABCF3Q9NUQ8 MIR3140-201ENST00000583685 90 ntBASIC0.3□□□□□ -2.36
ABCF3Q9NUQ8 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.3□□□□□ -2.36
ABCF3Q9NUQ8 SNORD110-201ENST00000408189 75 ntBASIC0.29□□□□□ -2.36
ABCF3Q9NUQ8 AC073261.1-201ENST00000429409 121 ntBASIC0.29□□□□□ -2.36
ABCF3Q9NUQ8 AC108740.1-201ENST00000498629 225 ntBASIC0.29□□□□□ -2.36
ABCF3Q9NUQ8 FGF7P7-201ENST00000514120 227 ntBASIC0.29□□□□□ -2.36
ABCF3Q9NUQ8 RNU7-153P-201ENST00000516455 62 ntBASIC0.29□□□□□ -2.36
ABCF3Q9NUQ8 Y_RNA.694-201ENST00000516677 117 ntBASIC0.29□□□□□ -2.36
ABCF3Q9NUQ8 RNU6-1057P-201ENST00000517162 102 ntBASIC0.29□□□□□ -2.36
ABCF3Q9NUQ8 RNU6-497P-201ENST00000365316 104 ntBASIC0.28□□□□□ -2.36
ABCF3Q9NUQ8 MT-TY-201ENST00000387409 66 ntBASIC0.28□□□□□ -2.36
ABCF3Q9NUQ8 Y_RNA.593-201ENST00000410292 98 ntBASIC0.28□□□□□ -2.36
ABCF3Q9NUQ8 RNU6-1052P-201ENST00000411398 104 ntBASIC0.28□□□□□ -2.36
ABCF3Q9NUQ8 RNU7-129P-201ENST00000516128 62 ntBASIC0.28□□□□□ -2.36
ABCF3Q9NUQ8 RNU6-719P-201ENST00000516671 104 ntBASIC0.28□□□□□ -2.36
ABCF3Q9NUQ8 MIR4460-201ENST00000577862 86 ntBASIC0.28□□□□□ -2.36
ABCF3Q9NUQ8 MIR5582-201ENST00000579697 68 ntBASIC0.28□□□□□ -2.36
ABCF3Q9NUQ8 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
ABCF3Q9NUQ8 RNU6-633P-201ENST00000362612 103 ntBASIC0.27□□□□□ -2.37
ABCF3Q9NUQ8 SNORD116-22-201ENST00000384430 92 ntBASIC0.27□□□□□ -2.37
ABCF3Q9NUQ8 Y_RNA.558-201ENST00000384685 113 ntBASIC0.27□□□□□ -2.37
ABCF3Q9NUQ8 RNU5B-6P-201ENST00000516765 68 ntBASIC0.27□□□□□ -2.37
ABCF3Q9NUQ8 MIR4473-201ENST00000583731 91 ntBASIC0.27□□□□□ -2.37
ABCF3Q9NUQ8 AC069503.3-201ENST00000618674 145 ntBASIC0.27□□□□□ -2.37
ABCF3Q9NUQ8 Y_RNA.17-201ENST00000362433 111 ntBASIC0.26□□□□□ -2.37
ABCF3Q9NUQ8 RNA5SP128-201ENST00000365305 116 ntBASIC0.26□□□□□ -2.37
ABCF3Q9NUQ8 RNU6V-201ENST00000384105 107 ntBASIC0.26□□□□□ -2.37
ABCF3Q9NUQ8 RNU6-848P-201ENST00000515948 107 ntBASIC0.26□□□□□ -2.37
ABCF3Q9NUQ8 RNU6-617P-201ENST00000516147 107 ntBASIC0.26□□□□□ -2.37
ABCF3Q9NUQ8 RNU6-473P-201ENST00000516164 107 ntBASIC0.26□□□□□ -2.37
ABCF3Q9NUQ8 RNU6-1049P-201ENST00000516414 107 ntBASIC0.26□□□□□ -2.37
ABCF3Q9NUQ8 AC069113.3-201ENST00000521019 150 ntBASIC0.26□□□□□ -2.37
ABCF3Q9NUQ8 MIR5706-201ENST00000579841 80 ntBASIC0.26□□□□□ -2.37
ABCF3Q9NUQ8 YWHAEP2-201ENST00000580066 112 ntBASIC0.26□□□□□ -2.37
ABCF3Q9NUQ8 MIR4796-201ENST00000580742 81 ntBASIC0.26□□□□□ -2.37
ABCF3Q9NUQ8 MIR548AE1-201ENST00000583292 70 ntBASIC0.26□□□□□ -2.37
ABCF3Q9NUQ8 MIR548O2-201ENST00000616090 70 ntBASIC0.26□□□□□ -2.37
ABCF3Q9NUQ8 MIR499B-201ENST00000636498 73 ntBASIC0.26□□□□□ -2.37
ABCF3Q9NUQ8 SNORA63.2-201ENST00000362603 126 ntBASIC0.25□□□□□ -2.37
ABCF3Q9NUQ8 SNORD114-23-201ENST00000363536 72 ntBASIC0.25□□□□□ -2.37
ABCF3Q9NUQ8 RNU6-1134P-201ENST00000365156 101 ntBASIC0.25□□□□□ -2.37
ABCF3Q9NUQ8 RNU6-1051P-201ENST00000365471 102 ntBASIC0.25□□□□□ -2.37
ABCF3Q9NUQ8 RNU6-54P-201ENST00000365563 107 ntBASIC0.25□□□□□ -2.37
ABCF3Q9NUQ8 SNORA24B-201ENST00000384176 131 ntBASIC0.25□□□□□ -2.37
ABCF3Q9NUQ8 RNU6-675P-201ENST00000384236 104 ntBASIC0.25□□□□□ -2.37
ABCF3Q9NUQ8 MIR519C-201ENST00000385053 87 ntBASIC0.25□□□□□ -2.37
ABCF3Q9NUQ8 RNU6-127P-201ENST00000390897 107 ntBASIC0.25□□□□□ -2.37
ABCF3Q9NUQ8 MTATP6P29-201ENST00000415057 132 ntBASIC0.25□□□□□ -2.37
ABCF3Q9NUQ8 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.25□□□□□ -2.37
ABCF3Q9NUQ8 RNA5SP170-201ENST00000517150 101 ntBASIC0.25□□□□□ -2.37
ABCF3Q9NUQ8 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
ABCF3Q9NUQ8 Y_RNA.125-201ENST00000363371 111 ntBASIC0.24□□□□□ -2.37
ABCF3Q9NUQ8 MIR1236-201ENST00000408340 102 ntBASIC0.24□□□□□ -2.37
ABCF3Q9NUQ8 MIR4677-201ENST00000584153 80 ntBASIC0.24□□□□□ -2.37
ABCF3Q9NUQ8 PVT1_3.1-201ENST00000620853 95 ntBASIC0.24□□□□□ -2.37
ABCF3Q9NUQ8 SNORA9.1-201ENST00000362412 131 ntBASIC0.23□□□□□ -2.37
ABCF3Q9NUQ8 Y_RNA.73-201ENST00000362910 113 ntBASIC0.23□□□□□ -2.37
ABCF3Q9NUQ8 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
ABCF3Q9NUQ8 MIR548AD-201ENST00000584780 82 ntBASIC0.23□□□□□ -2.37
ABCF3Q9NUQ8 Y_RNA.258-201ENST00000364613 105 ntBASIC0.22□□□□□ -2.37
ABCF3Q9NUQ8 RNU6-294P-201ENST00000364999 102 ntBASIC0.22□□□□□ -2.37
ABCF3Q9NUQ8 Y_RNA.369-201ENST00000365568 117 ntBASIC0.22□□□□□ -2.37
ABCF3Q9NUQ8 MIR489-201ENST00000384923 84 ntBASIC0.22□□□□□ -2.37
ABCF3Q9NUQ8 SNORA25.13-201ENST00000516395 103 ntBASIC0.22□□□□□ -2.37
ABCF3Q9NUQ8 MIR548BB-201ENST00000626714 66 ntBASIC0.22□□□□□ -2.37
ABCF3Q9NUQ8 U3.27-201ENST00000391237 200 ntBASIC0.21□□□□□ -2.38
ABCF3Q9NUQ8 snoU13.17-201ENST00000458802 104 ntBASIC0.21□□□□□ -2.38
ABCF3Q9NUQ8 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.21□□□□□ -2.38
ABCF3Q9NUQ8 MIR3925-201ENST00000584674 77 ntBASIC0.21□□□□□ -2.38
ABCF3Q9NUQ8 Y_RNA.437-201ENST00000384113 113 ntBASIC0.2□□□□□ -2.38
ABCF3Q9NUQ8 MIR643-201ENST00000385267 97 ntBASIC0.2□□□□□ -2.38
ABCF3Q9NUQ8 MIR216B-201ENST00000390186 82 ntBASIC0.2□□□□□ -2.38
ABCF3Q9NUQ8 RNU6-762P-201ENST00000517107 102 ntBASIC0.2□□□□□ -2.38
ABCF3Q9NUQ8 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.2□□□□□ -2.38
ABCF3Q9NUQ8 AC010487.4-201ENST00000637027 61 ntBASIC0.2□□□□□ -2.38
ABCF3Q9NUQ8 MIR548H2-201ENST00000408874 88 ntBASIC0.19□□□□□ -2.38
ABCF3Q9NUQ8 Y_RNA.611-201ENST00000410682 108 ntBASIC0.19□□□□□ -2.38
ABCF3Q9NUQ8 SNORD42B-201ENST00000458893 67 ntBASIC0.19□□□□□ -2.38
ABCF3Q9NUQ8 U7.6-201ENST00000610841 64 ntBASIC0.19□□□□□ -2.38
ABCF3Q9NUQ8 MIR516B1-201ENST00000385211 90 ntBASIC0.18□□□□□ -2.38
ABCF3Q9NUQ8 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
ABCF3Q9NUQ8 MIR4514-201ENST00000581410 57 ntBASIC0.18□□□□□ -2.38
ABCF3Q9NUQ8 MIR4315-1-201ENST00000636800 73 ntBASIC0.18□□□□□ -2.38
ABCF3Q9NUQ8 MIR4315-2-201ENST00000640925 73 ntBASIC0.18□□□□□ -2.38
ABCF3Q9NUQ8 RNU5F-1-201ENST00000362507 117 ntBASIC0.17□□□□□ -2.38
ABCF3Q9NUQ8 RNU6-1255P-201ENST00000363434 112 ntBASIC0.17□□□□□ -2.38
ABCF3Q9NUQ8 Y_RNA.407-201ENST00000383986 113 ntBASIC0.17□□□□□ -2.38
ABCF3Q9NUQ8 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.17□□□□□ -2.38
ABCF3Q9NUQ8 AC140658.3-201ENST00000567603 271 ntBASIC0.17□□□□□ -2.38
ABCF3Q9NUQ8 RN7SL793P-201ENST00000583259 296 ntBASIC0.17□□□□□ -2.38
ABCF3Q9NUQ8 AC006160.2-201ENST00000637708 154 ntBASIC0.17□□□□□ -2.38
ABCF3Q9NUQ8 MIR494-201ENST00000349529 81 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 273.4 ms