Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AC244250.2-201ENST00000418731 148 ntBASIC-0.21□□□□□ -2.44
NXF3Q9H4D5 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.21□□□□□ -2.44
NXF3Q9H4D5 MIR4777-201ENST00000583710 86 ntBASIC-0.21□□□□□ -2.44
NXF3Q9H4D5 MIR6759-201ENST00000638110 65 ntBASIC-0.21□□□□□ -2.44
NXF3Q9H4D5 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.22□□□□□ -2.44
NXF3Q9H4D5 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.22□□□□□ -2.44
NXF3Q9H4D5 SNORD114-29-201ENST00000364819 70 ntBASIC-0.22□□□□□ -2.44
NXF3Q9H4D5 RNU6-935P-201ENST00000410371 100 ntBASIC-0.22□□□□□ -2.44
NXF3Q9H4D5 AL365222.1-201ENST00000614661 98 ntBASIC-0.22□□□□□ -2.44
NXF3Q9H4D5 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.22□□□□□ -2.44
NXF3Q9H4D5 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.23□□□□□ -2.45
NXF3Q9H4D5 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.23□□□□□ -2.45
NXF3Q9H4D5 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.23□□□□□ -2.45
NXF3Q9H4D5 SNORD116-21-201ENST00000384507 92 ntBASIC-0.23□□□□□ -2.45
NXF3Q9H4D5 SNORD4A-201ENST00000459174 72 ntBASIC-0.23□□□□□ -2.45
NXF3Q9H4D5 MIR548O2-201ENST00000616090 70 ntBASIC-0.23□□□□□ -2.45
NXF3Q9H4D5 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.24□□□□□ -2.45
NXF3Q9H4D5 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.24□□□□□ -2.45
NXF3Q9H4D5 SNORD49B-201ENST00000365172 72 ntBASIC-0.24□□□□□ -2.45
NXF3Q9H4D5 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.24□□□□□ -2.45
NXF3Q9H4D5 AC097510.1-201ENST00000510945 133 ntBASIC-0.24□□□□□ -2.45
NXF3Q9H4D5 FGF7P7-201ENST00000514120 227 ntBASIC-0.24□□□□□ -2.45
NXF3Q9H4D5 RNU6-65P-201ENST00000516332 98 ntBASIC-0.24□□□□□ -2.45
NXF3Q9H4D5 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.24□□□□□ -2.45
NXF3Q9H4D5 MIR4536-1-201ENST00000583537 88 ntBASIC-0.24□□□□□ -2.45
NXF3Q9H4D5 MIR655-201ENST00000362159 97 ntBASIC-0.25□□□□□ -2.45
NXF3Q9H4D5 RNA5SP205-201ENST00000364653 136 ntBASIC-0.25□□□□□ -2.45
NXF3Q9H4D5 RNU6-880P-201ENST00000384526 107 ntBASIC-0.25□□□□□ -2.45
NXF3Q9H4D5 RNU6-959P-201ENST00000384671 107 ntBASIC-0.25□□□□□ -2.45
NXF3Q9H4D5 RNU6-813P-201ENST00000384691 107 ntBASIC-0.25□□□□□ -2.45
NXF3Q9H4D5 U3.27-201ENST00000391237 200 ntBASIC-0.25□□□□□ -2.45
NXF3Q9H4D5 RNU6-412P-201ENST00000516434 106 ntBASIC-0.25□□□□□ -2.45
NXF3Q9H4D5 IGLVI-20-201ENST00000519296 130 ntBASIC-0.25□□□□□ -2.45
NXF3Q9H4D5 MIR3140-201ENST00000583685 90 ntBASIC-0.25□□□□□ -2.45
NXF3Q9H4D5 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.25□□□□□ -2.45
NXF3Q9H4D5 RNU4-36P-201ENST00000364294 144 ntBASIC-0.26□□□□□ -2.45
NXF3Q9H4D5 MIR582-201ENST00000365731 98 ntBASIC-0.26□□□□□ -2.45
NXF3Q9H4D5 SNORD90-201ENST00000391145 111 ntBASIC-0.26□□□□□ -2.45
NXF3Q9H4D5 RNU6-644P-201ENST00000391155 98 ntBASIC-0.26□□□□□ -2.45
NXF3Q9H4D5 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.26□□□□□ -2.45
NXF3Q9H4D5 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.26□□□□□ -2.45
NXF3Q9H4D5 SNORD42B-201ENST00000458893 67 ntBASIC-0.26□□□□□ -2.45
NXF3Q9H4D5 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.26□□□□□ -2.45
NXF3Q9H4D5 MIR20A-201ENST00000362279 71 ntBASIC-0.27□□□□□ -2.45
NXF3Q9H4D5 RNA5SP98-201ENST00000363158 137 ntBASIC-0.27□□□□□ -2.45
NXF3Q9H4D5 RNU6-81P-201ENST00000365608 104 ntBASIC-0.27□□□□□ -2.45
NXF3Q9H4D5 SNORA19-201ENST00000384737 128 ntBASIC-0.27□□□□□ -2.45
NXF3Q9H4D5 SNORA49-201ENST00000386157 136 ntBASIC-0.27□□□□□ -2.45
NXF3Q9H4D5 RNA5SP292-201ENST00000390974 118 ntBASIC-0.27□□□□□ -2.45
NXF3Q9H4D5 MIR3666-201ENST00000607845 111 ntBASIC-0.27□□□□□ -2.45
NXF3Q9H4D5 MIR6129-201ENST00000616087 109 ntBASIC-0.27□□□□□ -2.45
NXF3Q9H4D5 RNU6-811P-201ENST00000384069 107 ntBASIC-0.28□□□□□ -2.45
NXF3Q9H4D5 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.28□□□□□ -2.45
NXF3Q9H4D5 AC244090.1-201ENST00000441884 93 ntBASIC-0.28□□□□□ -2.45
NXF3Q9H4D5 SNORD4B-201ENST00000459083 72 ntBASIC-0.28□□□□□ -2.45
NXF3Q9H4D5 RNU6-904P-201ENST00000516206 101 ntBASIC-0.28□□□□□ -2.45
NXF3Q9H4D5 AP000676.1-201ENST00000533307 52 ntBASIC-0.28□□□□□ -2.45
NXF3Q9H4D5 MIR3064-201ENST00000581130 66 ntBASIC-0.28□□□□□ -2.45
NXF3Q9H4D5 MIR590-201ENST00000385008 97 ntBASIC-0.29□□□□□ -2.46
NXF3Q9H4D5 MIR214-201ENST00000385214 110 ntBASIC-0.29□□□□□ -2.46
NXF3Q9H4D5 AC008267.6-201ENST00000441664 139 ntBASIC-0.29□□□□□ -2.46
NXF3Q9H4D5 RNU6-109P-201ENST00000516364 107 ntBASIC-0.29□□□□□ -2.46
NXF3Q9H4D5 RNU6-184P-201ENST00000516514 107 ntBASIC-0.29□□□□□ -2.46
NXF3Q9H4D5 SNORD114-11-201ENST00000363738 75 ntBASIC-0.3□□□□□ -2.46
NXF3Q9H4D5 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.3□□□□□ -2.46
NXF3Q9H4D5 RNU6-455P-201ENST00000384681 107 ntBASIC-0.3□□□□□ -2.46
NXF3Q9H4D5 SCARNA23-201ENST00000516060 130 ntBASIC-0.3□□□□□ -2.46
NXF3Q9H4D5 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.3□□□□□ -2.46
NXF3Q9H4D5 MIR4263-201ENST00000584745 83 ntBASIC-0.3□□□□□ -2.46
NXF3Q9H4D5 AC104996.3-201ENST00000590718 94 ntBASIC-0.3□□□□□ -2.46
NXF3Q9H4D5 AC145423.2-201ENST00000610631 239 ntBASIC-0.3□□□□□ -2.46
NXF3Q9H4D5 SNORD114-31-201ENST00000363219 75 ntBASIC-0.31□□□□□ -2.46
NXF3Q9H4D5 RNU6-476P-201ENST00000384726 107 ntBASIC-0.31□□□□□ -2.46
NXF3Q9H4D5 RNA5SP300-201ENST00000391197 107 ntBASIC-0.31□□□□□ -2.46
NXF3Q9H4D5 MIR548M-201ENST00000408260 86 ntBASIC-0.31□□□□□ -2.46
NXF3Q9H4D5 MIR548E-201ENST00000408287 88 ntBASIC-0.31□□□□□ -2.46
NXF3Q9H4D5 RNU6-554P-201ENST00000410466 106 ntBASIC-0.31□□□□□ -2.46
NXF3Q9H4D5 RNU6-519P-201ENST00000410590 108 ntBASIC-0.31□□□□□ -2.46
NXF3Q9H4D5 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.31□□□□□ -2.46
NXF3Q9H4D5 RNU7-61P-201ENST00000515897 61 ntBASIC-0.31□□□□□ -2.46
NXF3Q9H4D5 RNU6-162P-201ENST00000516228 103 ntBASIC-0.31□□□□□ -2.46
NXF3Q9H4D5 RNU6-537P-201ENST00000517277 103 ntBASIC-0.31□□□□□ -2.46
NXF3Q9H4D5 MIR4788-201ENST00000639104 80 ntBASIC-0.31□□□□□ -2.46
NXF3Q9H4D5 MIR548U-201ENST00000390728 81 ntBASIC-0.32□□□□□ -2.46
NXF3Q9H4D5 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.32□□□□□ -2.46
NXF3Q9H4D5 AL590491.3-201ENST00000610731 82 ntBASIC-0.32□□□□□ -2.46
NXF3Q9H4D5 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.32□□□□□ -2.46
NXF3Q9H4D5 RNU4-32P-201ENST00000363404 141 ntBASIC-0.33□□□□□ -2.46
NXF3Q9H4D5 SNORD114-4-201ENST00000363962 75 ntBASIC-0.33□□□□□ -2.46
NXF3Q9H4D5 SNORD58A-201ENST00000383875 65 ntBASIC-0.33□□□□□ -2.46
NXF3Q9H4D5 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.33□□□□□ -2.46
NXF3Q9H4D5 RNU6-106P-201ENST00000384405 107 ntBASIC-0.33□□□□□ -2.46
NXF3Q9H4D5 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.33□□□□□ -2.46
NXF3Q9H4D5 MIR9-2-201ENST00000384838 87 ntBASIC-0.33□□□□□ -2.46
NXF3Q9H4D5 RNU6-972P-201ENST00000391208 107 ntBASIC-0.33□□□□□ -2.46
NXF3Q9H4D5 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.33□□□□□ -2.46
NXF3Q9H4D5 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.33□□□□□ -2.46
NXF3Q9H4D5 AC026421.1-201ENST00000519101 163 ntBASIC-0.33□□□□□ -2.46
NXF3Q9H4D5 SNORA63.2-201ENST00000362603 126 ntBASIC-0.34□□□□□ -2.46
NXF3Q9H4D5 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.34□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 354.6 ms