Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.04□□□□□ -2.4
USP44Q9H0E7 MIR371B-201ENST00000638082 66 ntBASIC0.04□□□□□ -2.4
USP44Q9H0E7 RNU6-161P-201ENST00000363051 106 ntBASIC0.03□□□□□ -2.4
USP44Q9H0E7 MIR593-201ENST00000384856 100 ntBASIC0.03□□□□□ -2.4
USP44Q9H0E7 MIR329-2-201ENST00000385029 84 ntBASIC0.03□□□□□ -2.4
USP44Q9H0E7 RNU6-65P-201ENST00000516332 98 ntBASIC0.03□□□□□ -2.4
USP44Q9H0E7 YWHAEP2-201ENST00000580066 112 ntBASIC0.03□□□□□ -2.4
USP44Q9H0E7 SNORD114-5-201ENST00000362928 70 ntBASIC0.02□□□□□ -2.41
USP44Q9H0E7 Y_RNA.178-201ENST00000363832 102 ntBASIC0.02□□□□□ -2.41
USP44Q9H0E7 MIR145-201ENST00000384967 88 ntBASIC0.02□□□□□ -2.41
USP44Q9H0E7 MT-TY-201ENST00000387409 66 ntBASIC0.02□□□□□ -2.41
USP44Q9H0E7 RNU6-935P-201ENST00000410371 100 ntBASIC0.02□□□□□ -2.41
USP44Q9H0E7 Y_RNA.705-201ENST00000516862 110 ntBASIC0.02□□□□□ -2.41
USP44Q9H0E7 MIR4473-201ENST00000583731 91 ntBASIC0.02□□□□□ -2.41
USP44Q9H0E7 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.02□□□□□ -2.41
USP44Q9H0E7 RNU6-756P-201ENST00000383997 107 ntBASIC0.01□□□□□ -2.41
USP44Q9H0E7 RNU6-1113P-201ENST00000384348 107 ntBASIC0.01□□□□□ -2.41
USP44Q9H0E7 RNU6-109P-201ENST00000516364 107 ntBASIC0.01□□□□□ -2.41
USP44Q9H0E7 RNU6-184P-201ENST00000516514 107 ntBASIC0.01□□□□□ -2.41
USP44Q9H0E7 SCARNA11.2-201ENST00000517183 154 ntBASIC0.01□□□□□ -2.41
USP44Q9H0E7 MIRLET7F1-201ENST00000362202 87 ntBASIC0□□□□□ -2.41
USP44Q9H0E7 SNORD114-16-201ENST00000363044 70 ntBASIC0□□□□□ -2.41
USP44Q9H0E7 Y_RNA.239-201ENST00000364444 113 ntBASIC0□□□□□ -2.41
USP44Q9H0E7 RNU6-1325P-201ENST00000364905 105 ntBASIC0□□□□□ -2.41
USP44Q9H0E7 SNORD58A-201ENST00000383875 65 ntBASIC0□□□□□ -2.41
USP44Q9H0E7 RNU6-1081P-201ENST00000384537 107 ntBASIC0□□□□□ -2.41
USP44Q9H0E7 RNY4P18-201ENST00000391107 89 ntBASIC0□□□□□ -2.41
USP44Q9H0E7 RNU6-972P-201ENST00000391208 107 ntBASIC0□□□□□ -2.41
USP44Q9H0E7 Y_RNA.629-201ENST00000411368 105 ntBASIC0□□□□□ -2.41
USP44Q9H0E7 SNORD4B-201ENST00000459083 72 ntBASIC0□□□□□ -2.41
USP44Q9H0E7 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0□□□□□ -2.41
USP44Q9H0E7 RNA5SP395-201ENST00000516567 118 ntBASIC0□□□□□ -2.41
USP44Q9H0E7 RNU5B-6P-201ENST00000516765 68 ntBASIC0□□□□□ -2.41
USP44Q9H0E7 RNU6-1057P-201ENST00000517162 102 ntBASIC0□□□□□ -2.41
USP44Q9H0E7 MIR1295B-201ENST00000636144 60 ntBASIC0□□□□□ -2.41
USP44Q9H0E7 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.01□□□□□ -2.41
USP44Q9H0E7 MIR516B1-201ENST00000385211 90 ntBASIC-0.01□□□□□ -2.41
USP44Q9H0E7 RNU6-887P-201ENST00000410660 100 ntBASIC-0.01□□□□□ -2.41
USP44Q9H0E7 MIR4290-201ENST00000583807 95 ntBASIC-0.01□□□□□ -2.41
USP44Q9H0E7 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.01□□□□□ -2.41
USP44Q9H0E7 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.01□□□□□ -2.41
USP44Q9H0E7 AC084368.1-201ENST00000620935 65 ntBASIC-0.01□□□□□ -2.41
USP44Q9H0E7 RNU6-766P-201ENST00000362478 107 ntBASIC-0.02□□□□□ -2.41
USP44Q9H0E7 RNU6-132P-201ENST00000383863 107 ntBASIC-0.02□□□□□ -2.41
USP44Q9H0E7 AC104692.1-201ENST00000472406 90 ntBASIC-0.02□□□□□ -2.41
USP44Q9H0E7 MIR548AE1-201ENST00000583292 70 ntBASIC-0.02□□□□□ -2.41
USP44Q9H0E7 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.03□□□□□ -2.41
USP44Q9H0E7 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.03□□□□□ -2.41
USP44Q9H0E7 MIR451A-201ENST00000385059 72 ntBASIC-0.03□□□□□ -2.41
USP44Q9H0E7 SNORA75.1-201ENST00000391130 148 ntBASIC-0.03□□□□□ -2.41
USP44Q9H0E7 MIR876-201ENST00000401147 81 ntBASIC-0.03□□□□□ -2.41
USP44Q9H0E7 RNU7-61P-201ENST00000515897 61 ntBASIC-0.03□□□□□ -2.41
USP44Q9H0E7 MIR548O2-201ENST00000616090 70 ntBASIC-0.03□□□□□ -2.41
USP44Q9H0E7 uc_338.10-201ENST00000621872 182 ntBASIC-0.03□□□□□ -2.41
USP44Q9H0E7 MIR6759-201ENST00000638110 65 ntBASIC-0.03□□□□□ -2.41
USP44Q9H0E7 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.04□□□□□ -2.42
USP44Q9H0E7 MIR216B-201ENST00000390186 82 ntBASIC-0.04□□□□□ -2.42
USP44Q9H0E7 RNA5SP163-201ENST00000410304 99 ntBASIC-0.04□□□□□ -2.42
USP44Q9H0E7 RNU6-519P-201ENST00000410590 108 ntBASIC-0.04□□□□□ -2.42
USP44Q9H0E7 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.04□□□□□ -2.42
USP44Q9H0E7 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.04□□□□□ -2.42
USP44Q9H0E7 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
USP44Q9H0E7 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.05□□□□□ -2.42
USP44Q9H0E7 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.05□□□□□ -2.42
USP44Q9H0E7 MIR3064-201ENST00000581130 66 ntBASIC-0.05□□□□□ -2.42
USP44Q9H0E7 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.06□□□□□ -2.42
USP44Q9H0E7 RNU6V-201ENST00000384105 107 ntBASIC-0.06□□□□□ -2.42
USP44Q9H0E7 AL031737.1-201ENST00000450125 223 ntBASIC-0.06□□□□□ -2.42
USP44Q9H0E7 RNU6-180P-201ENST00000516697 61 ntBASIC-0.06□□□□□ -2.42
USP44Q9H0E7 U2.22-201ENST00000636441 106 ntBASIC-0.06□□□□□ -2.42
USP44Q9H0E7 MIR450A1-201ENST00000362262 91 ntBASIC-0.07□□□□□ -2.42
USP44Q9H0E7 RNU6-35P-201ENST00000384530 107 ntBASIC-0.07□□□□□ -2.42
USP44Q9H0E7 U3.27-201ENST00000391237 200 ntBASIC-0.07□□□□□ -2.42
USP44Q9H0E7 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.07□□□□□ -2.42
USP44Q9H0E7 RNU7-165P-201ENST00000458864 60 ntBASIC-0.07□□□□□ -2.42
USP44Q9H0E7 SNORD116-10-201ENST00000363791 102 ntBASIC-0.08□□□□□ -2.42
USP44Q9H0E7 RNU6-215P-201ENST00000365169 102 ntBASIC-0.08□□□□□ -2.42
USP44Q9H0E7 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.08□□□□□ -2.42
USP44Q9H0E7 MIR548U-201ENST00000390728 81 ntBASIC-0.08□□□□□ -2.42
USP44Q9H0E7 RNU7-159P-201ENST00000459284 62 ntBASIC-0.08□□□□□ -2.42
USP44Q9H0E7 RNU7-188P-201ENST00000517063 64 ntBASIC-0.08□□□□□ -2.42
USP44Q9H0E7 AC104996.3-201ENST00000590718 94 ntBASIC-0.08□□□□□ -2.42
USP44Q9H0E7 RN7SL660P-201ENST00000614852 299 ntBASIC-0.08□□□□□ -2.42
USP44Q9H0E7 MIR6514-201ENST00000622549 70 ntBASIC-0.08□□□□□ -2.42
USP44Q9H0E7 RNU6-755P-201ENST00000364400 103 ntBASIC-0.09□□□□□ -2.42
USP44Q9H0E7 RNU6-811P-201ENST00000384069 107 ntBASIC-0.09□□□□□ -2.42
USP44Q9H0E7 RNU6-154P-201ENST00000384306 106 ntBASIC-0.09□□□□□ -2.42
USP44Q9H0E7 RNU6-929P-201ENST00000384429 107 ntBASIC-0.09□□□□□ -2.42
USP44Q9H0E7 SNORD20-201ENST00000384550 80 ntBASIC-0.09□□□□□ -2.42
USP44Q9H0E7 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.09□□□□□ -2.42
USP44Q9H0E7 RNU6-162P-201ENST00000516228 103 ntBASIC-0.09□□□□□ -2.42
USP44Q9H0E7 RNU6-719P-201ENST00000516671 104 ntBASIC-0.09□□□□□ -2.42
USP44Q9H0E7 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.09□□□□□ -2.42
USP44Q9H0E7 AC026421.1-201ENST00000519101 163 ntBASIC-0.09□□□□□ -2.42
USP44Q9H0E7 U7.3-201ENST00000616123 62 ntBASIC-0.09□□□□□ -2.42
USP44Q9H0E7 RNU6-302P-201ENST00000365249 107 ntBASIC-0.1□□□□□ -2.43
USP44Q9H0E7 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.1□□□□□ -2.43
USP44Q9H0E7 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.1□□□□□ -2.43
USP44Q9H0E7 RNA5SP292-201ENST00000390974 118 ntBASIC-0.1□□□□□ -2.43
USP44Q9H0E7 FGF7P7-201ENST00000514120 227 ntBASIC-0.1□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 211.1 ms