Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 RNU4-36P-201ENST00000364294 144 ntBASIC0.07□□□□□ -2.4
USP38Q8NB14 RNU6-813P-201ENST00000384691 107 ntBASIC0.07□□□□□ -2.4
USP38Q8NB14 SNORA19-201ENST00000384737 128 ntBASIC0.07□□□□□ -2.4
USP38Q8NB14 RNU6-466P-201ENST00000391224 103 ntBASIC0.07□□□□□ -2.4
USP38Q8NB14 RNU6-904P-201ENST00000516206 101 ntBASIC0.07□□□□□ -2.4
USP38Q8NB14 RNU6-313P-201ENST00000516317 112 ntBASIC0.07□□□□□ -2.4
USP38Q8NB14 MIR4439-201ENST00000583746 80 ntBASIC0.07□□□□□ -2.4
USP38Q8NB14 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.07□□□□□ -2.4
USP38Q8NB14 MIR371B-201ENST00000638082 66 ntBASIC0.07□□□□□ -2.4
USP38Q8NB14 SNORD114-5-201ENST00000362928 70 ntBASIC0.06□□□□□ -2.4
USP38Q8NB14 RNU6-652P-201ENST00000365488 107 ntBASIC0.06□□□□□ -2.4
USP38Q8NB14 RNU6-1056P-201ENST00000383996 107 ntBASIC0.06□□□□□ -2.4
USP38Q8NB14 RNU6-106P-201ENST00000384405 107 ntBASIC0.06□□□□□ -2.4
USP38Q8NB14 MIR593-201ENST00000384856 100 ntBASIC0.06□□□□□ -2.4
USP38Q8NB14 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.06□□□□□ -2.4
USP38Q8NB14 RNU7-85P-201ENST00000458851 63 ntBASIC0.06□□□□□ -2.4
USP38Q8NB14 Y_RNA.648-201ENST00000459455 110 ntBASIC0.06□□□□□ -2.4
USP38Q8NB14 RNU6-589P-201ENST00000516485 107 ntBASIC0.06□□□□□ -2.4
USP38Q8NB14 RNU6-782P-201ENST00000516852 104 ntBASIC0.06□□□□□ -2.4
USP38Q8NB14 RNU6-664P-201ENST00000362381 107 ntBASIC0.05□□□□□ -2.4
USP38Q8NB14 Y_RNA.125-201ENST00000363371 111 ntBASIC0.05□□□□□ -2.4
USP38Q8NB14 SNORD101-201ENST00000384027 73 ntBASIC0.05□□□□□ -2.4
USP38Q8NB14 RNU6V-201ENST00000384105 107 ntBASIC0.05□□□□□ -2.4
USP38Q8NB14 RNU6-554P-201ENST00000410466 106 ntBASIC0.05□□□□□ -2.4
USP38Q8NB14 RNU2-51P-201ENST00000410708 197 ntBASIC0.05□□□□□ -2.4
USP38Q8NB14 RNU6-537P-201ENST00000517277 103 ntBASIC0.05□□□□□ -2.4
USP38Q8NB14 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.05□□□□□ -2.4
USP38Q8NB14 Y_RNA.10-201ENST00000362371 110 ntBASIC0.04□□□□□ -2.4
USP38Q8NB14 MIR590-201ENST00000385008 97 ntBASIC0.04□□□□□ -2.4
USP38Q8NB14 MIR1468-201ENST00000410600 86 ntBASIC0.04□□□□□ -2.4
USP38Q8NB14 SCARNA23-201ENST00000516060 130 ntBASIC0.04□□□□□ -2.4
USP38Q8NB14 RNU5B-6P-201ENST00000516765 68 ntBASIC0.04□□□□□ -2.4
USP38Q8NB14 RNU6-834P-201ENST00000362367 110 ntBASIC0.03□□□□□ -2.4
USP38Q8NB14 RNU6-161P-201ENST00000363051 106 ntBASIC0.03□□□□□ -2.4
USP38Q8NB14 MIR145-201ENST00000384967 88 ntBASIC0.03□□□□□ -2.4
USP38Q8NB14 Y_RNA.660-201ENST00000516002 120 ntBASIC0.03□□□□□ -2.4
USP38Q8NB14 YWHAEP2-201ENST00000580066 112 ntBASIC0.03□□□□□ -2.4
USP38Q8NB14 MIR4473-201ENST00000583731 91 ntBASIC0.03□□□□□ -2.4
USP38Q8NB14 MIR214-201ENST00000385214 110 ntBASIC0.02□□□□□ -2.41
USP38Q8NB14 RNU6-109P-201ENST00000516364 107 ntBASIC0.02□□□□□ -2.41
USP38Q8NB14 RNU6-184P-201ENST00000516514 107 ntBASIC0.02□□□□□ -2.41
USP38Q8NB14 MIR4460-201ENST00000577862 86 ntBASIC0.02□□□□□ -2.41
USP38Q8NB14 MIR4536-1-201ENST00000583537 88 ntBASIC0.02□□□□□ -2.41
USP38Q8NB14 AC069503.3-201ENST00000618674 145 ntBASIC0.02□□□□□ -2.41
USP38Q8NB14 MIRLET7F1-201ENST00000362202 87 ntBASIC0.01□□□□□ -2.41
USP38Q8NB14 SNORD114-16-201ENST00000363044 70 ntBASIC0.01□□□□□ -2.41
USP38Q8NB14 RNU6-644P-201ENST00000391155 98 ntBASIC0.01□□□□□ -2.41
USP38Q8NB14 MIR1302-5-201ENST00000408164 150 ntBASIC0.01□□□□□ -2.41
USP38Q8NB14 SNORA25.13-201ENST00000516395 103 ntBASIC0.01□□□□□ -2.41
USP38Q8NB14 SCARNA11.2-201ENST00000517183 154 ntBASIC0.01□□□□□ -2.41
USP38Q8NB14 SNORD49B-201ENST00000365172 72 ntBASIC0□□□□□ -2.41
USP38Q8NB14 MIR516B1-201ENST00000385211 90 ntBASIC0□□□□□ -2.41
USP38Q8NB14 MT-TY-201ENST00000387409 66 ntBASIC0□□□□□ -2.41
USP38Q8NB14 RNU6-406P-201ENST00000516470 107 ntBASIC0□□□□□ -2.41
USP38Q8NB14 Y_RNA.709-201ENST00000516952 92 ntBASIC0□□□□□ -2.41
USP38Q8NB14 MIR548AE1-201ENST00000583292 70 ntBASIC0□□□□□ -2.41
USP38Q8NB14 MIR4290-201ENST00000583807 95 ntBASIC0□□□□□ -2.41
USP38Q8NB14 RNU6-132P-201ENST00000383863 107 ntBASIC-0.01□□□□□ -2.41
USP38Q8NB14 RNU6-756P-201ENST00000383997 107 ntBASIC-0.01□□□□□ -2.41
USP38Q8NB14 RNU4-61P-201ENST00000411243 107 ntBASIC-0.01□□□□□ -2.41
USP38Q8NB14 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.01□□□□□ -2.41
USP38Q8NB14 RNU6-65P-201ENST00000516332 98 ntBASIC-0.01□□□□□ -2.41
USP38Q8NB14 RNU6-789P-201ENST00000517105 102 ntBASIC-0.01□□□□□ -2.41
USP38Q8NB14 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.01□□□□□ -2.41
USP38Q8NB14 MIR548AX-201ENST00000580117 73 ntBASIC-0.01□□□□□ -2.41
USP38Q8NB14 AC084368.1-201ENST00000620935 65 ntBASIC-0.01□□□□□ -2.41
USP38Q8NB14 SNORD58A-201ENST00000383875 65 ntBASIC-0.02□□□□□ -2.41
USP38Q8NB14 MIR892B-201ENST00000401279 77 ntBASIC-0.02□□□□□ -2.41
USP38Q8NB14 SNORD4B-201ENST00000459083 72 ntBASIC-0.02□□□□□ -2.41
USP38Q8NB14 MIR4645-201ENST00000583158 77 ntBASIC-0.02□□□□□ -2.41
USP38Q8NB14 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.02□□□□□ -2.41
USP38Q8NB14 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.03□□□□□ -2.41
USP38Q8NB14 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.03□□□□□ -2.41
USP38Q8NB14 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.03□□□□□ -2.41
USP38Q8NB14 RNU6-302P-201ENST00000365249 107 ntBASIC-0.03□□□□□ -2.41
USP38Q8NB14 RNU6-935P-201ENST00000410371 100 ntBASIC-0.03□□□□□ -2.41
USP38Q8NB14 RPS29P8-201ENST00000445109 171 ntBASIC-0.03□□□□□ -2.41
USP38Q8NB14 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.03□□□□□ -2.41
USP38Q8NB14 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.03□□□□□ -2.41
USP38Q8NB14 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.04□□□□□ -2.42
USP38Q8NB14 MIR451A-201ENST00000385059 72 ntBASIC-0.04□□□□□ -2.42
USP38Q8NB14 RNY4P18-201ENST00000391107 89 ntBASIC-0.04□□□□□ -2.42
USP38Q8NB14 RNA5SP163-201ENST00000410304 99 ntBASIC-0.04□□□□□ -2.42
USP38Q8NB14 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.04□□□□□ -2.42
USP38Q8NB14 RNU7-61P-201ENST00000515897 61 ntBASIC-0.04□□□□□ -2.42
USP38Q8NB14 RNU6-719P-201ENST00000516671 104 ntBASIC-0.04□□□□□ -2.42
USP38Q8NB14 RNU6-972P-201ENST00000391208 107 ntBASIC-0.05□□□□□ -2.42
USP38Q8NB14 MIR876-201ENST00000401147 81 ntBASIC-0.05□□□□□ -2.42
USP38Q8NB14 RNU6-887P-201ENST00000410660 100 ntBASIC-0.05□□□□□ -2.42
USP38Q8NB14 RN7SL660P-201ENST00000614852 299 ntBASIC-0.05□□□□□ -2.42
USP38Q8NB14 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.05□□□□□ -2.42
USP38Q8NB14 uc_338.10-201ENST00000621872 182 ntBASIC-0.05□□□□□ -2.42
USP38Q8NB14 RNU6-929P-201ENST00000384429 107 ntBASIC-0.06□□□□□ -2.42
USP38Q8NB14 MIR106A-201ENST00000384870 81 ntBASIC-0.06□□□□□ -2.42
USP38Q8NB14 SNX3P1X-201ENST00000414887 175 ntBASIC-0.06□□□□□ -2.42
USP38Q8NB14 RNU6-180P-201ENST00000516697 61 ntBASIC-0.06□□□□□ -2.42
USP38Q8NB14 MIR4743-201ENST00000584576 69 ntBASIC-0.06□□□□□ -2.42
USP38Q8NB14 MIR548O2-201ENST00000616090 70 ntBASIC-0.06□□□□□ -2.42
USP38Q8NB14 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.07□□□□□ -2.42
USP38Q8NB14 SNORA75.1-201ENST00000391130 148 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 203.4 ms