Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.41□□□□□ -2.48
CCDC63Q8NA47 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.41□□□□□ -2.48
CCDC63Q8NA47 RNU6-54P-201ENST00000365563 107 ntBASIC-0.41□□□□□ -2.48
CCDC63Q8NA47 RNU6-959P-201ENST00000384671 107 ntBASIC-0.41□□□□□ -2.48
CCDC63Q8NA47 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.41□□□□□ -2.48
CCDC63Q8NA47 RNU6-795P-201ENST00000516323 103 ntBASIC-0.41□□□□□ -2.48
CCDC63Q8NA47 AC012531.4-201ENST00000616509 177 ntBASIC-0.41□□□□□ -2.48
CCDC63Q8NA47 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.42□□□□□ -2.48
CCDC63Q8NA47 RNU4-36P-201ENST00000364294 144 ntBASIC-0.42□□□□□ -2.48
CCDC63Q8NA47 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.42□□□□□ -2.48
CCDC63Q8NA47 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.42□□□□□ -2.48
CCDC63Q8NA47 RNU6-132P-201ENST00000383863 107 ntBASIC-0.42□□□□□ -2.48
CCDC63Q8NA47 SNORA19.1-201ENST00000410656 129 ntBASIC-0.42□□□□□ -2.48
CCDC63Q8NA47 AL109933.3-201ENST00000619095 188 ntBASIC-0.42□□□□□ -2.48
CCDC63Q8NA47 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.43□□□□□ -2.48
CCDC63Q8NA47 U3.27-201ENST00000391237 200 ntBASIC-0.43□□□□□ -2.48
CCDC63Q8NA47 AC244090.1-201ENST00000441884 93 ntBASIC-0.43□□□□□ -2.48
CCDC63Q8NA47 RNA5SP300-201ENST00000391197 107 ntBASIC-0.44□□□□□ -2.48
CCDC63Q8NA47 RNU6-412P-201ENST00000516434 106 ntBASIC-0.44□□□□□ -2.48
CCDC63Q8NA47 RNA5SP480-201ENST00000516840 109 ntBASIC-0.44□□□□□ -2.48
CCDC63Q8NA47 RNU6-81P-201ENST00000365608 104 ntBASIC-0.45□□□□□ -2.48
CCDC63Q8NA47 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.45□□□□□ -2.48
CCDC63Q8NA47 SNORA49-201ENST00000386157 136 ntBASIC-0.45□□□□□ -2.48
CCDC63Q8NA47 SNORD4B-201ENST00000459083 72 ntBASIC-0.45□□□□□ -2.48
CCDC63Q8NA47 RNU6-904P-201ENST00000516206 101 ntBASIC-0.45□□□□□ -2.48
CCDC63Q8NA47 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.45□□□□□ -2.48
CCDC63Q8NA47 MIR3064-201ENST00000581130 66 ntBASIC-0.46□□□□□ -2.48
CCDC63Q8NA47 AL590491.3-201ENST00000610731 82 ntBASIC-0.46□□□□□ -2.48
CCDC63Q8NA47 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.47□□□□□ -2.48
CCDC63Q8NA47 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.47□□□□□ -2.48
CCDC63Q8NA47 SNORD42B-201ENST00000458893 67 ntBASIC-0.47□□□□□ -2.48
CCDC63Q8NA47 FGF7P7-201ENST00000514120 227 ntBASIC-0.47□□□□□ -2.48
CCDC63Q8NA47 RNU6-719P-201ENST00000516671 104 ntBASIC-0.47□□□□□ -2.48
CCDC63Q8NA47 RNU6-762P-201ENST00000517107 102 ntBASIC-0.47□□□□□ -2.48
CCDC63Q8NA47 MIR582-201ENST00000365731 98 ntBASIC-0.48□□□□□ -2.49
CCDC63Q8NA47 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.48□□□□□ -2.49
CCDC63Q8NA47 AC008267.6-201ENST00000441664 139 ntBASIC-0.48□□□□□ -2.49
CCDC63Q8NA47 SCARNA23-201ENST00000516060 130 ntBASIC-0.48□□□□□ -2.49
CCDC63Q8NA47 AC104996.3-201ENST00000590718 94 ntBASIC-0.48□□□□□ -2.49
CCDC63Q8NA47 AC145423.2-201ENST00000610631 239 ntBASIC-0.48□□□□□ -2.49
CCDC63Q8NA47 AL365222.1-201ENST00000614661 98 ntBASIC-0.48□□□□□ -2.49
CCDC63Q8NA47 RNA5SP457-201ENST00000363657 124 ntBASIC-0.49□□□□□ -2.49
CCDC63Q8NA47 RNU6-537P-201ENST00000517277 103 ntBASIC-0.49□□□□□ -2.49
CCDC63Q8NA47 MIR4263-201ENST00000584745 83 ntBASIC-0.49□□□□□ -2.49
CCDC63Q8NA47 RNU6-455P-201ENST00000384681 107 ntBASIC-0.5□□□□□ -2.49
CCDC63Q8NA47 MIR9-2-201ENST00000384838 87 ntBASIC-0.5□□□□□ -2.49
CCDC63Q8NA47 MIR329-2-201ENST00000385029 84 ntBASIC-0.5□□□□□ -2.49
CCDC63Q8NA47 MIR548U-201ENST00000390728 81 ntBASIC-0.5□□□□□ -2.49
CCDC63Q8NA47 MIR3140-201ENST00000583685 90 ntBASIC-0.5□□□□□ -2.49
CCDC63Q8NA47 MIR4788-201ENST00000639104 80 ntBASIC-0.5□□□□□ -2.49
CCDC63Q8NA47 SNORA63.2-201ENST00000362603 126 ntBASIC-0.51□□□□□ -2.49
CCDC63Q8NA47 RNU6-476P-201ENST00000384726 107 ntBASIC-0.51□□□□□ -2.49
CCDC63Q8NA47 MIR548E-201ENST00000408287 88 ntBASIC-0.51□□□□□ -2.49
CCDC63Q8NA47 RNU6-519P-201ENST00000410590 108 ntBASIC-0.51□□□□□ -2.49
CCDC63Q8NA47 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.51□□□□□ -2.49
CCDC63Q8NA47 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.51□□□□□ -2.49
CCDC63Q8NA47 SNORD58A-201ENST00000383875 65 ntBASIC-0.52□□□□□ -2.49
CCDC63Q8NA47 SNORA24B-201ENST00000384176 131 ntBASIC-0.52□□□□□ -2.49
CCDC63Q8NA47 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.52□□□□□ -2.49
CCDC63Q8NA47 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.52□□□□□ -2.49
CCDC63Q8NA47 RNA5SP292-201ENST00000390974 118 ntBASIC-0.52□□□□□ -2.49
CCDC63Q8NA47 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.52□□□□□ -2.49
CCDC63Q8NA47 RNU6-320P-201ENST00000516511 106 ntBASIC-0.52□□□□□ -2.49
CCDC63Q8NA47 AP000676.1-201ENST00000533307 52 ntBASIC-0.52□□□□□ -2.49
CCDC63Q8NA47 SNORD114-31-201ENST00000363219 75 ntBASIC-0.53□□□□□ -2.49
CCDC63Q8NA47 RNU6-972P-201ENST00000391208 107 ntBASIC-0.53□□□□□ -2.49
CCDC63Q8NA47 MIR548M-201ENST00000408260 86 ntBASIC-0.53□□□□□ -2.49
CCDC63Q8NA47 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.53□□□□□ -2.49
CCDC63Q8NA47 IGLVI-20-201ENST00000519296 130 ntBASIC-0.53□□□□□ -2.49
CCDC63Q8NA47 SNORD114-4-201ENST00000363962 75 ntBASIC-0.54□□□□□ -2.5
CCDC63Q8NA47 MIR590-201ENST00000385008 97 ntBASIC-0.54□□□□□ -2.5
CCDC63Q8NA47 RNU6-887P-201ENST00000410660 100 ntBASIC-0.54□□□□□ -2.5
CCDC63Q8NA47 AC097510.1-201ENST00000510945 133 ntBASIC-0.54□□□□□ -2.5
CCDC63Q8NA47 SNORD115-25-201ENST00000362619 82 ntBASIC-0.55□□□□□ -2.5
CCDC63Q8NA47 SNORD114-11-201ENST00000363738 75 ntBASIC-0.55□□□□□ -2.5
CCDC63Q8NA47 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.55□□□□□ -2.5
CCDC63Q8NA47 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.55□□□□□ -2.5
CCDC63Q8NA47 SNORD90-201ENST00000391145 111 ntBASIC-0.55□□□□□ -2.5
CCDC63Q8NA47 RNU6-554P-201ENST00000410466 106 ntBASIC-0.55□□□□□ -2.5
CCDC63Q8NA47 MIR6129-201ENST00000616087 109 ntBASIC-0.55□□□□□ -2.5
CCDC63Q8NA47 RNU6-495P-201ENST00000362995 107 ntBASIC-0.56□□□□□ -2.5
CCDC63Q8NA47 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.56□□□□□ -2.5
CCDC63Q8NA47 RNU6-106P-201ENST00000384405 107 ntBASIC-0.56□□□□□ -2.5
CCDC63Q8NA47 RNU6-900P-201ENST00000384498 102 ntBASIC-0.56□□□□□ -2.5
CCDC63Q8NA47 MIR1302-5-201ENST00000408164 150 ntBASIC-0.56□□□□□ -2.5
CCDC63Q8NA47 RNU6-62P-201ENST00000516526 102 ntBASIC-0.56□□□□□ -2.5
CCDC63Q8NA47 MIR4645-201ENST00000583158 77 ntBASIC-0.56□□□□□ -2.5
CCDC63Q8NA47 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.56□□□□□ -2.5
CCDC63Q8NA47 MIR6779-201ENST00000617283 64 ntBASIC-0.56□□□□□ -2.5
CCDC63Q8NA47 SNORD14C-201ENST00000365382 88 ntBASIC-0.57□□□□□ -2.5
CCDC63Q8NA47 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.57□□□□□ -2.5
CCDC63Q8NA47 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.58□□□□□ -2.5
CCDC63Q8NA47 RNA5SP257-201ENST00000363023 116 ntBASIC-0.58□□□□□ -2.5
CCDC63Q8NA47 SNORD114-28-201ENST00000363610 72 ntBASIC-0.58□□□□□ -2.5
CCDC63Q8NA47 RNU6-22P-201ENST00000384355 107 ntBASIC-0.58□□□□□ -2.5
CCDC63Q8NA47 SNORA19-201ENST00000384737 128 ntBASIC-0.58□□□□□ -2.5
CCDC63Q8NA47 SNORD2-201ENST00000459163 69 ntBASIC-0.58□□□□□ -2.5
CCDC63Q8NA47 SNORA18.5-201ENST00000516616 101 ntBASIC-0.58□□□□□ -2.5
CCDC63Q8NA47 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.59□□□□□ -2.5
CCDC63Q8NA47 RNA5SP275-201ENST00000363936 118 ntBASIC-0.59□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 297.9 ms