Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AC093729.1-201ENST00000513074 128 ntBASIC0.46□□□□□ -2.34
CLIP4Q8N3C7 RNU6-762P-201ENST00000517107 102 ntBASIC0.46□□□□□ -2.34
CLIP4Q8N3C7 MIR4752-201ENST00000579672 72 ntBASIC0.46□□□□□ -2.34
CLIP4Q8N3C7 MIR6513-201ENST00000621188 64 ntBASIC0.46□□□□□ -2.34
CLIP4Q8N3C7 Y_RNA.73-201ENST00000362910 113 ntBASIC0.45□□□□□ -2.34
CLIP4Q8N3C7 RNU1-141P-201ENST00000364623 158 ntBASIC0.45□□□□□ -2.34
CLIP4Q8N3C7 RNU6-497P-201ENST00000365316 104 ntBASIC0.45□□□□□ -2.34
CLIP4Q8N3C7 RNU6-1051P-201ENST00000365471 102 ntBASIC0.45□□□□□ -2.34
CLIP4Q8N3C7 RNU2-59P-201ENST00000410482 191 ntBASIC0.45□□□□□ -2.34
CLIP4Q8N3C7 FGF7P7-201ENST00000514120 227 ntBASIC0.45□□□□□ -2.34
CLIP4Q8N3C7 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.45□□□□□ -2.34
CLIP4Q8N3C7 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.45□□□□□ -2.34
CLIP4Q8N3C7 RNA5SP347-201ENST00000362445 119 ntBASIC0.44□□□□□ -2.34
CLIP4Q8N3C7 SNORD90-201ENST00000391145 111 ntBASIC0.44□□□□□ -2.34
CLIP4Q8N3C7 U3.27-201ENST00000391237 200 ntBASIC0.44□□□□□ -2.34
CLIP4Q8N3C7 AC093423.1-201ENST00000440817 142 ntBASIC0.44□□□□□ -2.34
CLIP4Q8N3C7 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.44□□□□□ -2.34
CLIP4Q8N3C7 RNA5SP484-201ENST00000458857 111 ntBASIC0.44□□□□□ -2.34
CLIP4Q8N3C7 SNORA68.3-201ENST00000515906 83 ntBASIC0.44□□□□□ -2.34
CLIP4Q8N3C7 SNORA25.13-201ENST00000516395 103 ntBASIC0.44□□□□□ -2.34
CLIP4Q8N3C7 MIR3140-201ENST00000583685 90 ntBASIC0.44□□□□□ -2.34
CLIP4Q8N3C7 MIR4679-1-201ENST00000637619 75 ntBASIC0.44□□□□□ -2.34
CLIP4Q8N3C7 SNORA63.2-201ENST00000362603 126 ntBASIC0.43□□□□□ -2.34
CLIP4Q8N3C7 RNY4P3-201ENST00000365254 95 ntBASIC0.43□□□□□ -2.34
CLIP4Q8N3C7 RNU6-820P-201ENST00000384273 107 ntBASIC0.43□□□□□ -2.34
CLIP4Q8N3C7 NAMPTP3-201ENST00000569273 224 ntBASIC0.43□□□□□ -2.34
CLIP4Q8N3C7 AC062037.1-201ENST00000605302 128 ntBASIC0.43□□□□□ -2.34
CLIP4Q8N3C7 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.43□□□□□ -2.34
CLIP4Q8N3C7 AC073869.9-201ENST00000641610 120 ntBASIC0.43□□□□□ -2.34
CLIP4Q8N3C7 SNORD44.1-201ENST00000363202 61 ntBASIC0.42□□□□□ -2.34
CLIP4Q8N3C7 Y_RNA.423-201ENST00000384057 113 ntBASIC0.42□□□□□ -2.34
CLIP4Q8N3C7 Y_RNA.540-201ENST00000384638 111 ntBASIC0.42□□□□□ -2.34
CLIP4Q8N3C7 MIR216A-201ENST00000385063 110 ntBASIC0.42□□□□□ -2.34
CLIP4Q8N3C7 MIR216B-201ENST00000390186 82 ntBASIC0.42□□□□□ -2.34
CLIP4Q8N3C7 MIR936-201ENST00000401264 98 ntBASIC0.42□□□□□ -2.34
CLIP4Q8N3C7 AC022137.1-201ENST00000483735 151 ntBASIC0.42□□□□□ -2.34
CLIP4Q8N3C7 RNA5SP480-201ENST00000516840 109 ntBASIC0.42□□□□□ -2.34
CLIP4Q8N3C7 MIR4460-201ENST00000577862 86 ntBASIC0.42□□□□□ -2.34
CLIP4Q8N3C7 SNORA70.25-201ENST00000612741 95 ntBASIC0.42□□□□□ -2.34
CLIP4Q8N3C7 SNORD110-201ENST00000408189 75 ntBASIC0.41□□□□□ -2.34
CLIP4Q8N3C7 RNU6-229P-201ENST00000516614 102 ntBASIC0.41□□□□□ -2.34
CLIP4Q8N3C7 MIR5588-201ENST00000581890 63 ntBASIC0.41□□□□□ -2.34
CLIP4Q8N3C7 RN7SL793P-201ENST00000583259 296 ntBASIC0.41□□□□□ -2.34
CLIP4Q8N3C7 AC243829.3-201ENST00000622177 108 ntBASIC0.41□□□□□ -2.34
CLIP4Q8N3C7 AC006160.2-201ENST00000637708 154 ntBASIC0.41□□□□□ -2.34
CLIP4Q8N3C7 SNORA2A-201ENST00000383885 135 ntBASIC0.4□□□□□ -2.35
CLIP4Q8N3C7 RNU6-979P-201ENST00000383896 107 ntBASIC0.4□□□□□ -2.35
CLIP4Q8N3C7 Y_RNA.426-201ENST00000384068 113 ntBASIC0.4□□□□□ -2.35
CLIP4Q8N3C7 AC114737.2-201ENST00000421583 173 ntBASIC0.4□□□□□ -2.35
CLIP4Q8N3C7 AC006210.1-201ENST00000424882 111 ntBASIC0.4□□□□□ -2.35
CLIP4Q8N3C7 AC140658.3-201ENST00000567603 271 ntBASIC0.4□□□□□ -2.35
CLIP4Q8N3C7 RNU1-29P-201ENST00000606574 126 ntBASIC0.4□□□□□ -2.35
CLIP4Q8N3C7 MIRLET7D-201ENST00000362263 87 ntBASIC0.39□□□□□ -2.35
CLIP4Q8N3C7 Y_RNA.36-201ENST00000362602 112 ntBASIC0.39□□□□□ -2.35
CLIP4Q8N3C7 MT-TY-201ENST00000387409 66 ntBASIC0.39□□□□□ -2.35
CLIP4Q8N3C7 SNORA26.2-201ENST00000390922 122 ntBASIC0.39□□□□□ -2.35
CLIP4Q8N3C7 RNY4P29-201ENST00000410801 97 ntBASIC0.39□□□□□ -2.35
CLIP4Q8N3C7 snoU13.17-201ENST00000458802 104 ntBASIC0.39□□□□□ -2.35
CLIP4Q8N3C7 MIR548O2-201ENST00000616090 70 ntBASIC0.39□□□□□ -2.35
CLIP4Q8N3C7 AC069503.3-201ENST00000618674 145 ntBASIC0.39□□□□□ -2.35
CLIP4Q8N3C7 MIR6755-201ENST00000619993 66 ntBASIC0.39□□□□□ -2.35
CLIP4Q8N3C7 MIR5087-201ENST00000635826 76 ntBASIC0.39□□□□□ -2.35
CLIP4Q8N3C7 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.38□□□□□ -2.35
CLIP4Q8N3C7 MIR103A1-201ENST00000362165 78 ntBASIC0.38□□□□□ -2.35
CLIP4Q8N3C7 RNU6-242P-201ENST00000384359 107 ntBASIC0.38□□□□□ -2.35
CLIP4Q8N3C7 RNU6-863P-201ENST00000515989 104 ntBASIC0.38□□□□□ -2.35
CLIP4Q8N3C7 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.38□□□□□ -2.35
CLIP4Q8N3C7 RNU5B-6P-201ENST00000516765 68 ntBASIC0.38□□□□□ -2.35
CLIP4Q8N3C7 MIR4711-201ENST00000578274 70 ntBASIC0.38□□□□□ -2.35
CLIP4Q8N3C7 MIR5706-201ENST00000579841 80 ntBASIC0.38□□□□□ -2.35
CLIP4Q8N3C7 YWHAEP2-201ENST00000580066 112 ntBASIC0.38□□□□□ -2.35
CLIP4Q8N3C7 RNU5F-1-201ENST00000362507 117 ntBASIC0.37□□□□□ -2.35
CLIP4Q8N3C7 SNORD114-26-201ENST00000363543 72 ntBASIC0.37□□□□□ -2.35
CLIP4Q8N3C7 Y_RNA.388-201ENST00000383919 113 ntBASIC0.37□□□□□ -2.35
CLIP4Q8N3C7 RNU6V-201ENST00000384105 107 ntBASIC0.37□□□□□ -2.35
CLIP4Q8N3C7 RNA5SP193-201ENST00000410353 107 ntBASIC0.37□□□□□ -2.35
CLIP4Q8N3C7 Y_RNA.607-201ENST00000410597 98 ntBASIC0.37□□□□□ -2.35
CLIP4Q8N3C7 RNU6-624P-201ENST00000363411 107 ntBASIC0.36□□□□□ -2.35
CLIP4Q8N3C7 RNU6-1276P-201ENST00000365372 104 ntBASIC0.36□□□□□ -2.35
CLIP4Q8N3C7 SNORA24B-201ENST00000384176 131 ntBASIC0.36□□□□□ -2.35
CLIP4Q8N3C7 RNU7-171P-201ENST00000459581 62 ntBASIC0.36□□□□□ -2.35
CLIP4Q8N3C7 RNU6-848P-201ENST00000515948 107 ntBASIC0.36□□□□□ -2.35
CLIP4Q8N3C7 RNU6-617P-201ENST00000516147 107 ntBASIC0.36□□□□□ -2.35
CLIP4Q8N3C7 RNU6-473P-201ENST00000516164 107 ntBASIC0.36□□□□□ -2.35
CLIP4Q8N3C7 RNU6-1232P-201ENST00000516299 86 ntBASIC0.36□□□□□ -2.35
CLIP4Q8N3C7 RNU6-1049P-201ENST00000516414 107 ntBASIC0.36□□□□□ -2.35
CLIP4Q8N3C7 SNORD114-23-201ENST00000363536 72 ntBASIC0.35□□□□□ -2.35
CLIP4Q8N3C7 RNU6-1152P-201ENST00000384576 107 ntBASIC0.35□□□□□ -2.35
CLIP4Q8N3C7 MIR760-201ENST00000390220 80 ntBASIC0.35□□□□□ -2.35
CLIP4Q8N3C7 RNU6-1177P-201ENST00000391058 104 ntBASIC0.35□□□□□ -2.35
CLIP4Q8N3C7 MIR1302-4-201ENST00000408701 150 ntBASIC0.35□□□□□ -2.35
CLIP4Q8N3C7 AL450471.1-201ENST00000447509 127 ntBASIC0.35□□□□□ -2.35
CLIP4Q8N3C7 RNU6-161P-201ENST00000363051 106 ntBASIC0.34□□□□□ -2.36
CLIP4Q8N3C7 RNU6-54P-201ENST00000365563 107 ntBASIC0.34□□□□□ -2.36
CLIP4Q8N3C7 MIR7-2-201ENST00000384970 110 ntBASIC0.34□□□□□ -2.36
CLIP4Q8N3C7 SNORD77.2-201ENST00000391045 68 ntBASIC0.34□□□□□ -2.36
CLIP4Q8N3C7 RNU6-592P-201ENST00000411333 103 ntBASIC0.34□□□□□ -2.36
CLIP4Q8N3C7 RNU6-1108P-201ENST00000516308 104 ntBASIC0.34□□□□□ -2.36
CLIP4Q8N3C7 MIR4473-201ENST00000583731 91 ntBASIC0.34□□□□□ -2.36
CLIP4Q8N3C7 U7.6-201ENST00000610841 64 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 231.8 ms