Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 MIR216B-201ENST00000390186 82 ntBASIC1.75□□□□□ -2.13
FOXR1Q6PIV2 RNU7-90P-201ENST00000459216 62 ntBASIC1.75□□□□□ -2.13
FOXR1Q6PIV2 RNU6-1089P-201ENST00000516473 104 ntBASIC1.75□□□□□ -2.13
FOXR1Q6PIV2 AL359821.1-201ENST00000605519 182 ntBASIC1.75□□□□□ -2.13
FOXR1Q6PIV2 RMST_2.1-201ENST00000617263 136 ntBASIC1.75□□□□□ -2.13
FOXR1Q6PIV2 RNU4-62P-201ENST00000410125 130 ntBASIC1.74□□□□□ -2.13
FOXR1Q6PIV2 snoU13.13-201ENST00000458842 104 ntBASIC1.74□□□□□ -2.13
FOXR1Q6PIV2 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.74□□□□□ -2.13
FOXR1Q6PIV2 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
FOXR1Q6PIV2 SNORA2.1-201ENST00000363089 137 ntBASIC1.73□□□□□ -2.13
FOXR1Q6PIV2 RNU6-936P-201ENST00000384005 107 ntBASIC1.73□□□□□ -2.13
FOXR1Q6PIV2 MIR7-2-201ENST00000384970 110 ntBASIC1.73□□□□□ -2.13
FOXR1Q6PIV2 Y_RNA.722-201ENST00000517279 114 ntBASIC1.73□□□□□ -2.13
FOXR1Q6PIV2 MIR502-201ENST00000606349 86 ntBASIC1.73□□□□□ -2.13
FOXR1Q6PIV2 RNU1-78P-201ENST00000391248 165 ntBASIC1.72□□□□□ -2.13
FOXR1Q6PIV2 MIR1827-201ENST00000408549 66 ntBASIC1.72□□□□□ -2.13
FOXR1Q6PIV2 TRMT112P2-201ENST00000512910 132 ntBASIC1.72□□□□□ -2.13
FOXR1Q6PIV2 MIR3938-201ENST00000582157 103 ntBASIC1.72□□□□□ -2.13
FOXR1Q6PIV2 AC244669.1-204ENST00000621564 178 ntBASIC1.72□□□□□ -2.13
FOXR1Q6PIV2 MIR6739-201ENST00000622461 75 ntBASIC1.72□□□□□ -2.13
FOXR1Q6PIV2 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
FOXR1Q6PIV2 MIR630-201ENST00000384957 97 ntBASIC1.71□□□□□ -2.14
FOXR1Q6PIV2 AC002350.1-201ENST00000490759 375 ntBASIC1.71□□□□□ -2.14
FOXR1Q6PIV2 RNU6-122P-201ENST00000516818 107 ntBASIC1.71□□□□□ -2.14
FOXR1Q6PIV2 SNORA44.1-201ENST00000517031 108 ntBASIC1.71□□□□□ -2.14
FOXR1Q6PIV2 MIR4303-201ENST00000581299 66 ntBASIC1.71□□□□□ -2.14
FOXR1Q6PIV2 MIR7111-201ENST00000619751 72 ntBASIC1.71□□□□□ -2.14
FOXR1Q6PIV2 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.71□□□□□ -2.14
FOXR1Q6PIV2 SNORD60.1-201ENST00000362451 73 ntBASIC1.7□□□□□ -2.14
FOXR1Q6PIV2 Y_RNA.118-201ENST00000363300 101 ntBASIC1.7□□□□□ -2.14
FOXR1Q6PIV2 RNU6-997P-201ENST00000384725 107 ntBASIC1.7□□□□□ -2.14
FOXR1Q6PIV2 MT-TY-201ENST00000387409 66 ntBASIC1.7□□□□□ -2.14
FOXR1Q6PIV2 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
FOXR1Q6PIV2 RNU6-321P-201ENST00000410912 106 ntBASIC1.7□□□□□ -2.14
FOXR1Q6PIV2 AL157398.1-201ENST00000452981 186 ntBASIC1.7□□□□□ -2.14
FOXR1Q6PIV2 RNU5B-6P-201ENST00000516765 68 ntBASIC1.7□□□□□ -2.14
FOXR1Q6PIV2 RNU6-92P-201ENST00000605893 104 ntBASIC1.7□□□□□ -2.14
FOXR1Q6PIV2 RNA5SP215-201ENST00000363440 122 ntBASIC1.69□□□□□ -2.14
FOXR1Q6PIV2 SNORA7.1-201ENST00000363750 139 ntBASIC1.69□□□□□ -2.14
FOXR1Q6PIV2 RNU6-1335P-201ENST00000365426 107 ntBASIC1.69□□□□□ -2.14
FOXR1Q6PIV2 SNORD41.1-201ENST00000391000 69 ntBASIC1.69□□□□□ -2.14
FOXR1Q6PIV2 AC018659.1-201ENST00000551083 169 ntBASIC1.69□□□□□ -2.14
FOXR1Q6PIV2 SNORD28-201ENST00000384706 75 ntBASIC1.68□□□□□ -2.14
FOXR1Q6PIV2 MIR320A-201ENST00000385302 82 ntBASIC1.68□□□□□ -2.14
FOXR1Q6PIV2 AP1B1P2-201ENST00000416196 106 ntBASIC1.68□□□□□ -2.14
FOXR1Q6PIV2 MIR4460-201ENST00000577862 86 ntBASIC1.68□□□□□ -2.14
FOXR1Q6PIV2 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
FOXR1Q6PIV2 MIR548C-201ENST00000384815 97 ntBASIC1.67□□□□□ -2.14
FOXR1Q6PIV2 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.67□□□□□ -2.14
FOXR1Q6PIV2 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.67□□□□□ -2.14
FOXR1Q6PIV2 BX248123.2-201ENST00000606318 124 ntBASIC1.67□□□□□ -2.14
FOXR1Q6PIV2 RNU6-1312P-201ENST00000362425 108 ntBASIC1.65□□□□□ -2.15
FOXR1Q6PIV2 RNU1-141P-201ENST00000364623 158 ntBASIC1.65□□□□□ -2.15
FOXR1Q6PIV2 RNU6-726P-201ENST00000364680 107 ntBASIC1.65□□□□□ -2.15
FOXR1Q6PIV2 RNA5SP117-201ENST00000365294 118 ntBASIC1.65□□□□□ -2.15
FOXR1Q6PIV2 RNU6-716P-201ENST00000365621 103 ntBASIC1.65□□□□□ -2.15
FOXR1Q6PIV2 RNU6-1184P-201ENST00000384588 108 ntBASIC1.65□□□□□ -2.15
FOXR1Q6PIV2 MIR8070-201ENST00000616510 88 ntBASIC1.65□□□□□ -2.15
FOXR1Q6PIV2 AC002429.1-201ENST00000437672 148 ntBASIC1.64□□□□□ -2.15
FOXR1Q6PIV2 SNORA70.22-201ENST00000517160 124 ntBASIC1.64□□□□□ -2.15
FOXR1Q6PIV2 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
FOXR1Q6PIV2 RNU6-269P-201ENST00000391077 97 ntBASIC1.63□□□□□ -2.15
FOXR1Q6PIV2 RNA5SP61-201ENST00000516453 100 ntBASIC1.63□□□□□ -2.15
FOXR1Q6PIV2 SNORD53B-201ENST00000577887 78 ntBASIC1.63□□□□□ -2.15
FOXR1Q6PIV2 MIR4639-201ENST00000584938 69 ntBASIC1.63□□□□□ -2.15
FOXR1Q6PIV2 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
FOXR1Q6PIV2 SNORD18A-201ENST00000363753 72 ntBASIC1.62□□□□□ -2.15
FOXR1Q6PIV2 SNORD89-201ENST00000390981 114 ntBASIC1.62□□□□□ -2.15
FOXR1Q6PIV2 SNORA67.5-201ENST00000391036 107 ntBASIC1.62□□□□□ -2.15
FOXR1Q6PIV2 MIR548L-201ENST00000408303 86 ntBASIC1.62□□□□□ -2.15
FOXR1Q6PIV2 RNU1-92P-201ENST00000517017 135 ntBASIC1.62□□□□□ -2.15
FOXR1Q6PIV2 MIR3198-2-201ENST00000577868 80 ntBASIC1.62□□□□□ -2.15
FOXR1Q6PIV2 MIR4422-201ENST00000581938 83 ntBASIC1.62□□□□□ -2.15
FOXR1Q6PIV2 MIR7974-201ENST00000615835 79 ntBASIC1.62□□□□□ -2.15
FOXR1Q6PIV2 RNU1-42P-201ENST00000364033 160 ntBASIC1.61□□□□□ -2.15
FOXR1Q6PIV2 MIR521-2-201ENST00000384818 87 ntBASIC1.61□□□□□ -2.15
FOXR1Q6PIV2 MIR499A-201ENST00000384903 122 ntBASIC1.61□□□□□ -2.15
FOXR1Q6PIV2 RNU6-808P-201ENST00000391233 108 ntBASIC1.61□□□□□ -2.15
FOXR1Q6PIV2 RNA5SP484-201ENST00000458857 111 ntBASIC1.61□□□□□ -2.15
FOXR1Q6PIV2 RNU7-74P-201ENST00000459104 62 ntBASIC1.61□□□□□ -2.15
FOXR1Q6PIV2 RNU7-95P-201ENST00000459222 64 ntBASIC1.61□□□□□ -2.15
FOXR1Q6PIV2 U2.7-201ENST00000619197 100 ntBASIC1.61□□□□□ -2.15
FOXR1Q6PIV2 U4.4-201ENST00000620626 117 ntBASIC1.61□□□□□ -2.15
FOXR1Q6PIV2 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
FOXR1Q6PIV2 AC008834.1-201ENST00000511612 175 ntBASIC1.6□□□□□ -2.15
FOXR1Q6PIV2 RNA5SP47-201ENST00000517230 109 ntBASIC1.6□□□□□ -2.15
FOXR1Q6PIV2 MIR548AD-201ENST00000584780 82 ntBASIC1.6□□□□□ -2.15
FOXR1Q6PIV2 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.6□□□□□ -2.15
FOXR1Q6PIV2 RNU6-302P-201ENST00000365249 107 ntBASIC1.59□□□□□ -2.15
FOXR1Q6PIV2 RNU6-1162P-201ENST00000384443 104 ntBASIC1.59□□□□□ -2.15
FOXR1Q6PIV2 RNU7-174P-201ENST00000516248 59 ntBASIC1.59□□□□□ -2.15
FOXR1Q6PIV2 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.59□□□□□ -2.15
FOXR1Q6PIV2 SNORA33.1-201ENST00000364957 130 ntBASIC1.58□□□□□ -2.16
FOXR1Q6PIV2 MIR3678-201ENST00000578455 94 ntBASIC1.58□□□□□ -2.16
FOXR1Q6PIV2 Y_RNA.224-201ENST00000364308 111 ntBASIC1.57□□□□□ -2.16
FOXR1Q6PIV2 Y_RNA.327-201ENST00000365201 102 ntBASIC1.57□□□□□ -2.16
FOXR1Q6PIV2 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.57□□□□□ -2.16
FOXR1Q6PIV2 Y_RNA.355-201ENST00000365462 98 ntBASIC1.56□□□□□ -2.16
FOXR1Q6PIV2 MIR582-201ENST00000365731 98 ntBASIC1.56□□□□□ -2.16
FOXR1Q6PIV2 SNORD105-201ENST00000386910 85 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 195.5 ms