Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 SNORD114-14-201ENST00000362723 75 ntBASIC-1.03□□□□□ -2.57
C11orf88Q6PI97 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.03□□□□□ -2.57
C11orf88Q6PI97 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.03□□□□□ -2.57
C11orf88Q6PI97 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.03□□□□□ -2.57
C11orf88Q6PI97 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.03□□□□□ -2.57
C11orf88Q6PI97 SNORA3B-201ENST00000391305 131 ntBASIC-1.03□□□□□ -2.57
C11orf88Q6PI97 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.03□□□□□ -2.57
C11orf88Q6PI97 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.03□□□□□ -2.57
C11orf88Q6PI97 MIR3144-201ENST00000579460 79 ntBASIC-1.03□□□□□ -2.57
C11orf88Q6PI97 RNU6-54P-201ENST00000365563 107 ntBASIC-1.04□□□□□ -2.58
C11orf88Q6PI97 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.04□□□□□ -2.58
C11orf88Q6PI97 RNU6-65P-201ENST00000516332 98 ntBASIC-1.04□□□□□ -2.58
C11orf88Q6PI97 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.05□□□□□ -2.58
C11orf88Q6PI97 SNX3P1X-201ENST00000414887 175 ntBASIC-1.05□□□□□ -2.58
C11orf88Q6PI97 snoU13.13-201ENST00000458842 104 ntBASIC-1.05□□□□□ -2.58
C11orf88Q6PI97 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.05□□□□□ -2.58
C11orf88Q6PI97 RNU6-719P-201ENST00000516671 104 ntBASIC-1.05□□□□□ -2.58
C11orf88Q6PI97 RNA5SP169-201ENST00000517268 117 ntBASIC-1.05□□□□□ -2.58
C11orf88Q6PI97 MIR4536-1-201ENST00000583537 88 ntBASIC-1.05□□□□□ -2.58
C11orf88Q6PI97 SNORD58C-201ENST00000365223 64 ntBASIC-1.06□□□□□ -2.58
C11orf88Q6PI97 RNY1P7-201ENST00000384743 110 ntBASIC-1.06□□□□□ -2.58
C11orf88Q6PI97 MIR587-201ENST00000384845 96 ntBASIC-1.06□□□□□ -2.58
C11orf88Q6PI97 MIR569-201ENST00000385228 96 ntBASIC-1.06□□□□□ -2.58
C11orf88Q6PI97 RNU6-86P-201ENST00000606534 107 ntBASIC-1.06□□□□□ -2.58
C11orf88Q6PI97 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.07□□□□□ -2.58
C11orf88Q6PI97 SNORD56B-201ENST00000384713 71 ntBASIC-1.07□□□□□ -2.58
C11orf88Q6PI97 AC025521.1-201ENST00000621624 286 ntBASIC-1.07□□□□□ -2.58
C11orf88Q6PI97 RNU4-32P-201ENST00000363404 141 ntBASIC-1.08□□□□□ -2.58
C11orf88Q6PI97 SNORD114-4-201ENST00000363962 75 ntBASIC-1.08□□□□□ -2.58
C11orf88Q6PI97 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.08□□□□□ -2.58
C11orf88Q6PI97 SNORD2-201ENST00000459163 69 ntBASIC-1.08□□□□□ -2.58
C11orf88Q6PI97 FGF7P7-201ENST00000514120 227 ntBASIC-1.08□□□□□ -2.58
C11orf88Q6PI97 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.09□□□□□ -2.58
C11orf88Q6PI97 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.09□□□□□ -2.58
C11orf88Q6PI97 RNU6-182P-201ENST00000516970 105 ntBASIC-1.09□□□□□ -2.58
C11orf88Q6PI97 MIR6738-201ENST00000619620 64 ntBASIC-1.09□□□□□ -2.58
C11orf88Q6PI97 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.09□□□□□ -2.58
C11orf88Q6PI97 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.1□□□□□ -2.59
C11orf88Q6PI97 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.1□□□□□ -2.59
C11orf88Q6PI97 MIR577-201ENST00000385196 96 ntBASIC-1.1□□□□□ -2.59
C11orf88Q6PI97 SNORA49-201ENST00000386157 136 ntBASIC-1.1□□□□□ -2.59
C11orf88Q6PI97 SNORD38.3-201ENST00000516599 73 ntBASIC-1.1□□□□□ -2.59
C11orf88Q6PI97 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.1□□□□□ -2.59
C11orf88Q6PI97 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.11□□□□□ -2.59
C11orf88Q6PI97 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.11□□□□□ -2.59
C11orf88Q6PI97 RNU6-10P-201ENST00000384036 107 ntBASIC-1.11□□□□□ -2.59
C11orf88Q6PI97 RNU6-426P-201ENST00000516464 97 ntBASIC-1.11□□□□□ -2.59
C11orf88Q6PI97 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.12□□□□□ -2.59
C11orf88Q6PI97 U3.27-201ENST00000391237 200 ntBASIC-1.12□□□□□ -2.59
C11orf88Q6PI97 AC021146.6-201ENST00000514659 117 ntBASIC-1.12□□□□□ -2.59
C11orf88Q6PI97 RNU6-75P-201ENST00000515944 104 ntBASIC-1.12□□□□□ -2.59
C11orf88Q6PI97 SNORA40.17-201ENST00000517256 115 ntBASIC-1.12□□□□□ -2.59
C11orf88Q6PI97 MIR4280-201ENST00000582178 76 ntBASIC-1.12□□□□□ -2.59
C11orf88Q6PI97 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.13□□□□□ -2.59
C11orf88Q6PI97 MIR582-201ENST00000365731 98 ntBASIC-1.13□□□□□ -2.59
C11orf88Q6PI97 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.13□□□□□ -2.59
C11orf88Q6PI97 MTND5P41-201ENST00000517498 206 ntBASIC-1.13□□□□□ -2.59
C11orf88Q6PI97 AC099654.10-201ENST00000640395 161 ntBASIC-1.13□□□□□ -2.59
C11orf88Q6PI97 MT-TG-201ENST00000387429 68 ntBASIC-1.14□□□□□ -2.59
C11orf88Q6PI97 MIR548E-201ENST00000408287 88 ntBASIC-1.14□□□□□ -2.59
C11orf88Q6PI97 MIR4694-201ENST00000578534 80 ntBASIC-1.14□□□□□ -2.59
C11orf88Q6PI97 MIR4324-201ENST00000584846 72 ntBASIC-1.14□□□□□ -2.59
C11orf88Q6PI97 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.15□□□□□ -2.59
C11orf88Q6PI97 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.15□□□□□ -2.59
C11orf88Q6PI97 RNU7-55P-201ENST00000459426 62 ntBASIC-1.15□□□□□ -2.59
C11orf88Q6PI97 AC097510.1-201ENST00000510945 133 ntBASIC-1.15□□□□□ -2.59
C11orf88Q6PI97 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.15□□□□□ -2.59
C11orf88Q6PI97 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.15□□□□□ -2.59
C11orf88Q6PI97 AC145423.2-201ENST00000610631 239 ntBASIC-1.15□□□□□ -2.59
C11orf88Q6PI97 RNU6-832P-201ENST00000363319 107 ntBASIC-1.16□□□□□ -2.6
C11orf88Q6PI97 MIR196A1-201ENST00000388006 70 ntBASIC-1.16□□□□□ -2.6
C11orf88Q6PI97 SNORD50.2-201ENST00000365465 70 ntBASIC-1.17□□□□□ -2.6
C11orf88Q6PI97 SNORD42B-201ENST00000458893 67 ntBASIC-1.17□□□□□ -2.6
C11orf88Q6PI97 AL513043.2-201ENST00000573941 143 ntBASIC-1.17□□□□□ -2.6
C11orf88Q6PI97 AL353621.2-201ENST00000605340 133 ntBASIC-1.17□□□□□ -2.6
C11orf88Q6PI97 MIR6851-201ENST00000617060 67 ntBASIC-1.17□□□□□ -2.6
C11orf88Q6PI97 AL157777.2-201ENST00000258070 137 ntBASIC-1.18□□□□□ -2.6
C11orf88Q6PI97 RNU6-772P-201ENST00000516042 105 ntBASIC-1.18□□□□□ -2.6
C11orf88Q6PI97 AL035470.1-201ENST00000622571 220 ntBASIC-1.18□□□□□ -2.6
C11orf88Q6PI97 RNY3P2-201ENST00000362918 102 ntBASIC-1.19□□□□□ -2.6
C11orf88Q6PI97 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.19□□□□□ -2.6
C11orf88Q6PI97 MTND4LP9-201ENST00000427694 174 ntBASIC-1.19□□□□□ -2.6
C11orf88Q6PI97 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.19□□□□□ -2.6
C11orf88Q6PI97 MIR4719-201ENST00000585233 84 ntBASIC-1.19□□□□□ -2.6
C11orf88Q6PI97 snoR1.1-201ENST00000628177 80 ntBASIC-1.19□□□□□ -2.6
C11orf88Q6PI97 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.2□□□□□ -2.6
C11orf88Q6PI97 MIR1468-201ENST00000410600 86 ntBASIC-1.2□□□□□ -2.6
C11orf88Q6PI97 SCARNA17-201ENST00000516183 144 ntBASIC-1.2□□□□□ -2.6
C11orf88Q6PI97 RNU6-973P-201ENST00000364690 107 ntBASIC-1.21□□□□□ -2.6
C11orf88Q6PI97 SNORA40-201ENST00000388090 126 ntBASIC-1.21□□□□□ -2.6
C11orf88Q6PI97 AC068339.1-201ENST00000526965 141 ntBASIC-1.21□□□□□ -2.6
C11orf88Q6PI97 MIR4320-201ENST00000636981 65 ntBASIC-1.21□□□□□ -2.6
C11orf88Q6PI97 SNORD83B-201ENST00000386745 93 ntBASIC-1.22□□□□□ -2.6
C11orf88Q6PI97 MIR548U-201ENST00000390728 81 ntBASIC-1.22□□□□□ -2.6
C11orf88Q6PI97 RNU7-85P-201ENST00000458851 63 ntBASIC-1.22□□□□□ -2.6
C11orf88Q6PI97 MIR5704-201ENST00000584029 77 ntBASIC-1.22□□□□□ -2.6
C11orf88Q6PI97 SNORD45B-201ENST00000364617 72 ntBASIC-1.23□□□□□ -2.61
C11orf88Q6PI97 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.23□□□□□ -2.61
C11orf88Q6PI97 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.23□□□□□ -2.61
C11orf88Q6PI97 RNU6-476P-201ENST00000384726 107 ntBASIC-1.23□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms