Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 MT-TY-201ENST00000387409 66 ntBASIC0.08□□□□□ -2.4
PPP4R4Q6NUP7 Y_RNA.705-201ENST00000516862 110 ntBASIC0.08□□□□□ -2.4
PPP4R4Q6NUP7 RNU6-935P-201ENST00000410371 100 ntBASIC0.07□□□□□ -2.4
PPP4R4Q6NUP7 YWHAEP2-201ENST00000580066 112 ntBASIC0.07□□□□□ -2.4
PPP4R4Q6NUP7 Y_RNA.818-201ENST00000618813 71 ntBASIC0.07□□□□□ -2.4
PPP4R4Q6NUP7 MIRLET7F1-201ENST00000362202 87 ntBASIC0.06□□□□□ -2.4
PPP4R4Q6NUP7 RNU6-132P-201ENST00000383863 107 ntBASIC0.06□□□□□ -2.4
PPP4R4Q6NUP7 RNU6-887P-201ENST00000410660 100 ntBASIC0.06□□□□□ -2.4
PPP4R4Q6NUP7 SNORD4B-201ENST00000459083 72 ntBASIC0.06□□□□□ -2.4
PPP4R4Q6NUP7 RNA5SP285-201ENST00000516619 119 ntBASIC0.06□□□□□ -2.4
PPP4R4Q6NUP7 MIR4460-201ENST00000577862 86 ntBASIC0.06□□□□□ -2.4
PPP4R4Q6NUP7 MIR4536-1-201ENST00000583537 88 ntBASIC0.06□□□□□ -2.4
PPP4R4Q6NUP7 MIR371B-201ENST00000638082 66 ntBASIC0.06□□□□□ -2.4
PPP4R4Q6NUP7 SNORD114-5-201ENST00000362928 70 ntBASIC0.05□□□□□ -2.4
PPP4R4Q6NUP7 SNORD58A-201ENST00000383875 65 ntBASIC0.05□□□□□ -2.4
PPP4R4Q6NUP7 Y_RNA.433-201ENST00000384089 102 ntBASIC0.05□□□□□ -2.4
PPP4R4Q6NUP7 RNU6-972P-201ENST00000391208 107 ntBASIC0.05□□□□□ -2.4
PPP4R4Q6NUP7 RNU7-61P-201ENST00000515897 61 ntBASIC0.05□□□□□ -2.4
PPP4R4Q6NUP7 RNU6-65P-201ENST00000516332 98 ntBASIC0.05□□□□□ -2.4
PPP4R4Q6NUP7 MIR5190-201ENST00000581537 80 ntBASIC0.05□□□□□ -2.4
PPP4R4Q6NUP7 MIR4473-201ENST00000583731 91 ntBASIC0.05□□□□□ -2.4
PPP4R4Q6NUP7 Y_RNA.107-201ENST00000363190 121 ntBASIC0.04□□□□□ -2.4
PPP4R4Q6NUP7 RNU6-755P-201ENST00000364400 103 ntBASIC0.04□□□□□ -2.4
PPP4R4Q6NUP7 RNU6-215P-201ENST00000365169 102 ntBASIC0.04□□□□□ -2.4
PPP4R4Q6NUP7 RNU6-1113P-201ENST00000384348 107 ntBASIC0.04□□□□□ -2.4
PPP4R4Q6NUP7 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.04□□□□□ -2.4
PPP4R4Q6NUP7 MIR548AE1-201ENST00000583292 70 ntBASIC0.04□□□□□ -2.4
PPP4R4Q6NUP7 MIR145-201ENST00000384967 88 ntBASIC0.03□□□□□ -2.4
PPP4R4Q6NUP7 MIR329-2-201ENST00000385029 84 ntBASIC0.03□□□□□ -2.4
PPP4R4Q6NUP7 MIR610-201ENST00000385139 96 ntBASIC0.03□□□□□ -2.4
PPP4R4Q6NUP7 MIR876-201ENST00000401147 81 ntBASIC0.03□□□□□ -2.4
PPP4R4Q6NUP7 RNU5B-6P-201ENST00000516765 68 ntBASIC0.03□□□□□ -2.4
PPP4R4Q6NUP7 Y_RNA.93-201ENST00000363066 109 ntBASIC0.02□□□□□ -2.41
PPP4R4Q6NUP7 Y_RNA.239-201ENST00000364444 113 ntBASIC0.02□□□□□ -2.41
PPP4R4Q6NUP7 RNU6-652P-201ENST00000365488 107 ntBASIC0.02□□□□□ -2.41
PPP4R4Q6NUP7 MIR593-201ENST00000384856 100 ntBASIC0.02□□□□□ -2.41
PPP4R4Q6NUP7 MIR451A-201ENST00000385059 72 ntBASIC0.02□□□□□ -2.41
PPP4R4Q6NUP7 MIR4743-201ENST00000584576 69 ntBASIC0.02□□□□□ -2.41
PPP4R4Q6NUP7 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.02□□□□□ -2.41
PPP4R4Q6NUP7 MIR548O2-201ENST00000616090 70 ntBASIC0.02□□□□□ -2.41
PPP4R4Q6NUP7 MIR450A1-201ENST00000362262 91 ntBASIC0.01□□□□□ -2.41
PPP4R4Q6NUP7 SNORD20-201ENST00000384550 80 ntBASIC0.01□□□□□ -2.41
PPP4R4Q6NUP7 SCARNA11.2-201ENST00000517183 154 ntBASIC0.01□□□□□ -2.41
PPP4R4Q6NUP7 MIR3064-201ENST00000581130 66 ntBASIC0.01□□□□□ -2.41
PPP4R4Q6NUP7 MIR4290-201ENST00000583807 95 ntBASIC0.01□□□□□ -2.41
PPP4R4Q6NUP7 Y_RNA.291-201ENST00000364886 113 ntBASIC0□□□□□ -2.41
PPP4R4Q6NUP7 DLEU2_3.1-201ENST00000620005 73 ntBASIC0□□□□□ -2.41
PPP4R4Q6NUP7 SNORD114-16-201ENST00000363044 70 ntBASIC-0.01□□□□□ -2.41
PPP4R4Q6NUP7 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.01□□□□□ -2.41
PPP4R4Q6NUP7 MIR516B1-201ENST00000385211 90 ntBASIC-0.01□□□□□ -2.41
PPP4R4Q6NUP7 AL031737.1-201ENST00000450125 223 ntBASIC-0.01□□□□□ -2.41
PPP4R4Q6NUP7 RNA5SP395-201ENST00000516567 118 ntBASIC-0.01□□□□□ -2.41
PPP4R4Q6NUP7 RNU6-158P-201ENST00000517104 100 ntBASIC-0.01□□□□□ -2.41
PPP4R4Q6NUP7 MIR4667-201ENST00000578933 66 ntBASIC-0.01□□□□□ -2.41
PPP4R4Q6NUP7 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.02□□□□□ -2.41
PPP4R4Q6NUP7 RNU6-519P-201ENST00000410590 108 ntBASIC-0.02□□□□□ -2.41
PPP4R4Q6NUP7 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.02□□□□□ -2.41
PPP4R4Q6NUP7 AC104996.3-201ENST00000590718 94 ntBASIC-0.02□□□□□ -2.41
PPP4R4Q6NUP7 RNU6V-201ENST00000384105 107 ntBASIC-0.03□□□□□ -2.41
PPP4R4Q6NUP7 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.03□□□□□ -2.41
PPP4R4Q6NUP7 SNORA75.1-201ENST00000391130 148 ntBASIC-0.03□□□□□ -2.41
PPP4R4Q6NUP7 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
PPP4R4Q6NUP7 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.03□□□□□ -2.41
PPP4R4Q6NUP7 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.03□□□□□ -2.41
PPP4R4Q6NUP7 U7.3-201ENST00000616123 62 ntBASIC-0.03□□□□□ -2.41
PPP4R4Q6NUP7 AC084368.1-201ENST00000620935 65 ntBASIC-0.03□□□□□ -2.41
PPP4R4Q6NUP7 SNORA63.4-201ENST00000362763 126 ntBASIC-0.04□□□□□ -2.42
PPP4R4Q6NUP7 SNORD116-10-201ENST00000363791 102 ntBASIC-0.04□□□□□ -2.42
PPP4R4Q6NUP7 MIR216B-201ENST00000390186 82 ntBASIC-0.04□□□□□ -2.42
PPP4R4Q6NUP7 RNA5SP292-201ENST00000390974 118 ntBASIC-0.04□□□□□ -2.42
PPP4R4Q6NUP7 MIR892B-201ENST00000401279 77 ntBASIC-0.04□□□□□ -2.42
PPP4R4Q6NUP7 MTATP8P2-201ENST00000435212 202 ntBASIC-0.04□□□□□ -2.42
PPP4R4Q6NUP7 RNU6-162P-201ENST00000516228 103 ntBASIC-0.04□□□□□ -2.42
PPP4R4Q6NUP7 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.04□□□□□ -2.42
PPP4R4Q6NUP7 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.04□□□□□ -2.42
PPP4R4Q6NUP7 RNA5SP163-201ENST00000410304 99 ntBASIC-0.05□□□□□ -2.42
PPP4R4Q6NUP7 RNU6-180P-201ENST00000516697 61 ntBASIC-0.05□□□□□ -2.42
PPP4R4Q6NUP7 AC026421.1-201ENST00000519101 163 ntBASIC-0.05□□□□□ -2.42
PPP4R4Q6NUP7 RN7SL660P-201ENST00000614852 299 ntBASIC-0.05□□□□□ -2.42
PPP4R4Q6NUP7 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.06□□□□□ -2.42
PPP4R4Q6NUP7 RNU6-811P-201ENST00000384069 107 ntBASIC-0.06□□□□□ -2.42
PPP4R4Q6NUP7 U3.27-201ENST00000391237 200 ntBASIC-0.06□□□□□ -2.42
PPP4R4Q6NUP7 RNU7-165P-201ENST00000458864 60 ntBASIC-0.06□□□□□ -2.42
PPP4R4Q6NUP7 RNU6-919P-201ENST00000516731 104 ntBASIC-0.06□□□□□ -2.42
PPP4R4Q6NUP7 RNU7-188P-201ENST00000517063 64 ntBASIC-0.06□□□□□ -2.42
PPP4R4Q6NUP7 RNU6-54P-201ENST00000365563 107 ntBASIC-0.07□□□□□ -2.42
PPP4R4Q6NUP7 MIR548U-201ENST00000390728 81 ntBASIC-0.07□□□□□ -2.42
PPP4R4Q6NUP7 uc_338.10-201ENST00000621872 182 ntBASIC-0.07□□□□□ -2.42
PPP4R4Q6NUP7 MIR6759-201ENST00000638110 65 ntBASIC-0.07□□□□□ -2.42
PPP4R4Q6NUP7 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.08□□□□□ -2.42
PPP4R4Q6NUP7 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.08□□□□□ -2.42
PPP4R4Q6NUP7 RNU6-154P-201ENST00000384306 106 ntBASIC-0.08□□□□□ -2.42
PPP4R4Q6NUP7 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.08□□□□□ -2.42
PPP4R4Q6NUP7 RNU6-35P-201ENST00000384530 107 ntBASIC-0.08□□□□□ -2.42
PPP4R4Q6NUP7 SNORD90-201ENST00000391145 111 ntBASIC-0.08□□□□□ -2.42
PPP4R4Q6NUP7 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.09□□□□□ -2.42
PPP4R4Q6NUP7 SNORA24B-201ENST00000384176 131 ntBASIC-0.09□□□□□ -2.42
PPP4R4Q6NUP7 RNU6-929P-201ENST00000384429 107 ntBASIC-0.09□□□□□ -2.42
PPP4R4Q6NUP7 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
PPP4R4Q6NUP7 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.09□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 226.1 ms