Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 Y_RNA.426-201ENST00000384068 113 ntBASIC0.69□□□□□ -2.3
LTBQ06643 MIR508-201ENST00000384857 115 ntBASIC0.69□□□□□ -2.3
LTBQ06643 MIR548U-201ENST00000390728 81 ntBASIC0.69□□□□□ -2.3
LTBQ06643 RNA5SP193-201ENST00000410353 107 ntBASIC0.69□□□□□ -2.3
LTBQ06643 SNORA25.13-201ENST00000516395 103 ntBASIC0.69□□□□□ -2.3
LTBQ06643 RNU7-13P-201ENST00000516413 62 ntBASIC0.69□□□□□ -2.3
LTBQ06643 RNU6-135P-201ENST00000516769 101 ntBASIC0.69□□□□□ -2.3
LTBQ06643 AC140658.3-201ENST00000567603 271 ntBASIC0.69□□□□□ -2.3
LTBQ06643 MIR4711-201ENST00000578274 70 ntBASIC0.69□□□□□ -2.3
LTBQ06643 MIR4796-201ENST00000580742 81 ntBASIC0.69□□□□□ -2.3
LTBQ06643 MIR548AG2-201ENST00000581228 64 ntBASIC0.69□□□□□ -2.3
LTBQ06643 MIR1245B-201ENST00000636115 69 ntBASIC0.69□□□□□ -2.3
LTBQ06643 Y_RNA.239-201ENST00000364444 113 ntBASIC0.68□□□□□ -2.3
LTBQ06643 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.68□□□□□ -2.3
LTBQ06643 AC067863.3-201ENST00000624172 122 ntBASIC0.68□□□□□ -2.3
LTBQ06643 RNA5SP347-201ENST00000362445 119 ntBASIC0.67□□□□□ -2.3
LTBQ06643 SNORA36.1-201ENST00000363424 132 ntBASIC0.67□□□□□ -2.3
LTBQ06643 SNORD115-37-201ENST00000363768 82 ntBASIC0.67□□□□□ -2.3
LTBQ06643 RNU6-1229P-201ENST00000364295 107 ntBASIC0.67□□□□□ -2.3
LTBQ06643 MIR4666B-201ENST00000578142 81 ntBASIC0.67□□□□□ -2.3
LTBQ06643 MIR6866-201ENST00000638146 69 ntBASIC0.67□□□□□ -2.3
LTBQ06643 RNU6-726P-201ENST00000364680 107 ntBASIC0.66□□□□□ -2.3
LTBQ06643 Y_RNA.313-201ENST00000365095 103 ntBASIC0.66□□□□□ -2.3
LTBQ06643 RNU6-1126P-201ENST00000384002 107 ntBASIC0.66□□□□□ -2.3
LTBQ06643 Y_RNA.437-201ENST00000384113 113 ntBASIC0.66□□□□□ -2.3
LTBQ06643 Y_RNA.607-201ENST00000410597 98 ntBASIC0.66□□□□□ -2.3
LTBQ06643 MIR2113-201ENST00000459007 91 ntBASIC0.66□□□□□ -2.3
LTBQ06643 PSMC1P5-201ENST00000512850 177 ntBASIC0.66□□□□□ -2.3
LTBQ06643 SCARNA16.5-201ENST00000517114 183 ntBASIC0.66□□□□□ -2.3
LTBQ06643 MIR3140-201ENST00000583685 90 ntBASIC0.66□□□□□ -2.3
LTBQ06643 RNU6-228P-201ENST00000362700 106 ntBASIC0.65□□□□□ -2.31
LTBQ06643 RNU6-624P-201ENST00000363411 107 ntBASIC0.65□□□□□ -2.31
LTBQ06643 Y_RNA.219-201ENST00000364232 113 ntBASIC0.65□□□□□ -2.31
LTBQ06643 SNORD115-44-201ENST00000365391 82 ntBASIC0.65□□□□□ -2.31
LTBQ06643 RNU6-1124P-201ENST00000384169 107 ntBASIC0.65□□□□□ -2.31
LTBQ06643 RNU6-110P-201ENST00000384508 104 ntBASIC0.65□□□□□ -2.31
LTBQ06643 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.65□□□□□ -2.31
LTBQ06643 RNU6-1052P-201ENST00000411398 104 ntBASIC0.65□□□□□ -2.31
LTBQ06643 RNU6-719P-201ENST00000516671 104 ntBASIC0.65□□□□□ -2.31
LTBQ06643 RNA5SP94-201ENST00000516917 108 ntBASIC0.65□□□□□ -2.31
LTBQ06643 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.65□□□□□ -2.31
LTBQ06643 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.65□□□□□ -2.31
LTBQ06643 AC243829.3-201ENST00000622177 108 ntBASIC0.65□□□□□ -2.31
LTBQ06643 MIR6828-201ENST00000636181 60 ntBASIC0.65□□□□□ -2.31
LTBQ06643 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
LTBQ06643 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.64□□□□□ -2.31
LTBQ06643 Y_RNA.316-201ENST00000365118 111 ntBASIC0.64□□□□□ -2.31
LTBQ06643 RNU6-1051P-201ENST00000365471 102 ntBASIC0.64□□□□□ -2.31
LTBQ06643 RNU6-652P-201ENST00000365488 107 ntBASIC0.64□□□□□ -2.31
LTBQ06643 SNORA36.2-201ENST00000384004 127 ntBASIC0.64□□□□□ -2.31
LTBQ06643 SNORD78.1-201ENST00000390866 65 ntBASIC0.64□□□□□ -2.31
LTBQ06643 SNORD41.1-201ENST00000391000 69 ntBASIC0.64□□□□□ -2.31
LTBQ06643 RNU6-935P-201ENST00000410371 100 ntBASIC0.64□□□□□ -2.31
LTBQ06643 AL450471.1-201ENST00000447509 127 ntBASIC0.64□□□□□ -2.31
LTBQ06643 RNU4-45P-201ENST00000365469 141 ntBASIC0.63□□□□□ -2.31
LTBQ06643 MIR451A-201ENST00000385059 72 ntBASIC0.63□□□□□ -2.31
LTBQ06643 snoU13.17-201ENST00000458802 104 ntBASIC0.63□□□□□ -2.31
LTBQ06643 FGF7P7-201ENST00000514120 227 ntBASIC0.63□□□□□ -2.31
LTBQ06643 SNORA63.2-201ENST00000362603 126 ntBASIC0.62□□□□□ -2.31
LTBQ06643 RNU6-478P-201ENST00000363904 110 ntBASIC0.62□□□□□ -2.31
LTBQ06643 MIR617-201ENST00000385030 97 ntBASIC0.62□□□□□ -2.31
LTBQ06643 MIR519E-201ENST00000385075 84 ntBASIC0.62□□□□□ -2.31
LTBQ06643 MIR548L-201ENST00000408303 86 ntBASIC0.62□□□□□ -2.31
LTBQ06643 MIR1255A-201ENST00000408338 113 ntBASIC0.62□□□□□ -2.31
LTBQ06643 RNA5SP285-201ENST00000516619 119 ntBASIC0.62□□□□□ -2.31
LTBQ06643 RNA5SP268-201ENST00000516828 124 ntBASIC0.62□□□□□ -2.31
LTBQ06643 MIR2909-201ENST00000617113 69 ntBASIC0.62□□□□□ -2.31
LTBQ06643 RNA5SP517-201ENST00000364724 117 ntBASIC0.61□□□□□ -2.31
LTBQ06643 MIR140-201ENST00000385282 100 ntBASIC0.61□□□□□ -2.31
LTBQ06643 RNU6-269P-201ENST00000391077 97 ntBASIC0.61□□□□□ -2.31
LTBQ06643 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.61□□□□□ -2.31
LTBQ06643 RNA5SP227-201ENST00000516184 113 ntBASIC0.61□□□□□ -2.31
LTBQ06643 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.61□□□□□ -2.31
LTBQ06643 MIR5087-201ENST00000635826 76 ntBASIC0.61□□□□□ -2.31
LTBQ06643 MIR3202-2-201ENST00000635980 79 ntBASIC0.61□□□□□ -2.31
LTBQ06643 RNU6-161P-201ENST00000363051 106 ntBASIC0.6□□□□□ -2.31
LTBQ06643 RNA5SP225-201ENST00000410874 135 ntBASIC0.6□□□□□ -2.31
LTBQ06643 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.6□□□□□ -2.31
LTBQ06643 RNU6-1108P-201ENST00000516308 104 ntBASIC0.6□□□□□ -2.31
LTBQ06643 RNU6-1057P-201ENST00000517162 102 ntBASIC0.6□□□□□ -2.31
LTBQ06643 MIR7107-201ENST00000611489 80 ntBASIC0.6□□□□□ -2.31
LTBQ06643 AL627230.5-201ENST00000619807 58 ntBASIC0.6□□□□□ -2.31
LTBQ06643 Y_RNA.94-201ENST00000363068 106 ntBASIC0.59□□□□□ -2.31
LTBQ06643 SNORA24B-201ENST00000384176 131 ntBASIC0.59□□□□□ -2.31
LTBQ06643 SNORA8.2-201ENST00000384372 139 ntBASIC0.59□□□□□ -2.31
LTBQ06643 RNU6-129P-201ENST00000391022 107 ntBASIC0.59□□□□□ -2.31
LTBQ06643 RNU6-1275P-201ENST00000391087 107 ntBASIC0.59□□□□□ -2.31
LTBQ06643 AL162376.1-201ENST00000624117 175 ntBASIC0.59□□□□□ -2.31
LTBQ06643 AC093423.1-201ENST00000440817 142 ntBASIC0.58□□□□□ -2.32
LTBQ06643 RNU6-557P-201ENST00000516842 110 ntBASIC0.58□□□□□ -2.32
LTBQ06643 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.58□□□□□ -2.32
LTBQ06643 U3.27-201ENST00000391237 200 ntBASIC0.57□□□□□ -2.32
LTBQ06643 Y_RNA.685-201ENST00000516532 108 ntBASIC0.57□□□□□ -2.32
LTBQ06643 SNORA62.5-201ENST00000516634 120 ntBASIC0.57□□□□□ -2.32
LTBQ06643 MIR4712-201ENST00000583750 82 ntBASIC0.57□□□□□ -2.32
LTBQ06643 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
LTBQ06643 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.56□□□□□ -2.32
LTBQ06643 RNU6-208P-201ENST00000362431 107 ntBASIC0.56□□□□□ -2.32
LTBQ06643 RNU1-141P-201ENST00000364623 158 ntBASIC0.56□□□□□ -2.32
LTBQ06643 RNY4P3-201ENST00000365254 95 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 316.3 ms