Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MIR892B-201ENST00000401279 77 ntBASIC0.08□□□□□ -2.4
CLDN20P56880 SNORA25.13-201ENST00000516395 103 ntBASIC0.08□□□□□ -2.4
CLDN20P56880 RNA5SP330-201ENST00000517096 96 ntBASIC0.08□□□□□ -2.4
CLDN20P56880 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.08□□□□□ -2.4
CLDN20P56880 SNORD114-9-201ENST00000364370 72 ntBASIC0.07□□□□□ -2.4
CLDN20P56880 RNU6-755P-201ENST00000364400 103 ntBASIC0.07□□□□□ -2.4
CLDN20P56880 SNORD58A-201ENST00000383875 65 ntBASIC0.07□□□□□ -2.4
CLDN20P56880 MIR1197-201ENST00000408818 88 ntBASIC0.07□□□□□ -2.4
CLDN20P56880 RNU6-109P-201ENST00000516364 107 ntBASIC0.07□□□□□ -2.4
CLDN20P56880 RNU6-184P-201ENST00000516514 107 ntBASIC0.07□□□□□ -2.4
CLDN20P56880 MIR4743-201ENST00000584576 69 ntBASIC0.07□□□□□ -2.4
CLDN20P56880 SNORD116-10-201ENST00000363791 102 ntBASIC0.06□□□□□ -2.4
CLDN20P56880 RNU6-215P-201ENST00000365169 102 ntBASIC0.06□□□□□ -2.4
CLDN20P56880 RNU6-519P-201ENST00000410590 108 ntBASIC0.06□□□□□ -2.4
CLDN20P56880 SNORD4B-201ENST00000459083 72 ntBASIC0.06□□□□□ -2.4
CLDN20P56880 RNU7-61P-201ENST00000515897 61 ntBASIC0.06□□□□□ -2.4
CLDN20P56880 YWHAEP2-201ENST00000580066 112 ntBASIC0.06□□□□□ -2.4
CLDN20P56880 Y_RNA.115-201ENST00000363272 98 ntBASIC0.05□□□□□ -2.4
CLDN20P56880 RNA5SP325-201ENST00000363756 130 ntBASIC0.05□□□□□ -2.4
CLDN20P56880 RNA5SP63-201ENST00000391225 112 ntBASIC0.05□□□□□ -2.4
CLDN20P56880 Y_RNA.660-201ENST00000516002 120 ntBASIC0.05□□□□□ -2.4
CLDN20P56880 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.05□□□□□ -2.4
CLDN20P56880 RNU6-158P-201ENST00000517104 100 ntBASIC0.05□□□□□ -2.4
CLDN20P56880 MIRLET7F1-201ENST00000362202 87 ntBASIC0.04□□□□□ -2.4
CLDN20P56880 MIR548U-201ENST00000390728 81 ntBASIC0.04□□□□□ -2.4
CLDN20P56880 SNORA75.1-201ENST00000391130 148 ntBASIC0.04□□□□□ -2.4
CLDN20P56880 U3.27-201ENST00000391237 200 ntBASIC0.04□□□□□ -2.4
CLDN20P56880 Y_RNA.677-201ENST00000516401 85 ntBASIC0.04□□□□□ -2.4
CLDN20P56880 RNU6-919P-201ENST00000516731 104 ntBASIC0.04□□□□□ -2.4
CLDN20P56880 MIR4473-201ENST00000583731 91 ntBASIC0.04□□□□□ -2.4
CLDN20P56880 MIR3925-201ENST00000584674 77 ntBASIC0.04□□□□□ -2.4
CLDN20P56880 MIR450A1-201ENST00000362262 91 ntBASIC0.03□□□□□ -2.4
CLDN20P56880 RNU6-161P-201ENST00000363051 106 ntBASIC0.03□□□□□ -2.4
CLDN20P56880 RNA5SP457-201ENST00000363657 124 ntBASIC0.03□□□□□ -2.4
CLDN20P56880 SNORD20-201ENST00000384550 80 ntBASIC0.03□□□□□ -2.4
CLDN20P56880 MIR451A-201ENST00000385059 72 ntBASIC0.03□□□□□ -2.4
CLDN20P56880 MIR548H2-201ENST00000408874 88 ntBASIC0.02□□□□□ -2.41
CLDN20P56880 SCARNA11.2-201ENST00000517183 154 ntBASIC0.02□□□□□ -2.41
CLDN20P56880 MIR548O2-201ENST00000616090 70 ntBASIC0.02□□□□□ -2.41
CLDN20P56880 AL109933.3-201ENST00000619095 188 ntBASIC0.02□□□□□ -2.41
CLDN20P56880 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.02□□□□□ -2.41
CLDN20P56880 AC084368.1-201ENST00000620935 65 ntBASIC0.02□□□□□ -2.41
CLDN20P56880 uc_338.10-201ENST00000621872 182 ntBASIC0.02□□□□□ -2.41
CLDN20P56880 MIR2052-201ENST00000636055 55 ntBASIC0.02□□□□□ -2.41
CLDN20P56880 RNU6-132P-201ENST00000383863 107 ntBASIC0.01□□□□□ -2.41
CLDN20P56880 RNU6-811P-201ENST00000384069 107 ntBASIC0.01□□□□□ -2.41
CLDN20P56880 MIR593-201ENST00000384856 100 ntBASIC0.01□□□□□ -2.41
CLDN20P56880 MIR145-201ENST00000384967 88 ntBASIC0.01□□□□□ -2.41
CLDN20P56880 MIR516B1-201ENST00000385211 90 ntBASIC0.01□□□□□ -2.41
CLDN20P56880 MIR876-201ENST00000401147 81 ntBASIC0.01□□□□□ -2.41
CLDN20P56880 RNU5B-6P-201ENST00000516765 68 ntBASIC0.01□□□□□ -2.41
CLDN20P56880 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
CLDN20P56880 MIR3064-201ENST00000581130 66 ntBASIC0.01□□□□□ -2.41
CLDN20P56880 MIR4768-201ENST00000585270 74 ntBASIC0.01□□□□□ -2.41
CLDN20P56880 AC104996.3-201ENST00000590718 94 ntBASIC0.01□□□□□ -2.41
CLDN20P56880 MIR2909-201ENST00000617113 69 ntBASIC0.01□□□□□ -2.41
CLDN20P56880 SNORD114-5-201ENST00000362928 70 ntBASIC0□□□□□ -2.41
CLDN20P56880 Y_RNA.407-201ENST00000383986 113 ntBASIC0□□□□□ -2.41
CLDN20P56880 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0□□□□□ -2.41
CLDN20P56880 MTATP8P2-201ENST00000435212 202 ntBASIC0□□□□□ -2.41
CLDN20P56880 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0□□□□□ -2.41
CLDN20P56880 U7.3-201ENST00000616123 62 ntBASIC0□□□□□ -2.41
CLDN20P56880 AL035461.1-201ENST00000421490 332 ntBASIC-0.01□□□□□ -2.41
CLDN20P56880 MIR4290-201ENST00000583807 95 ntBASIC-0.01□□□□□ -2.41
CLDN20P56880 RNU6V-201ENST00000384105 107 ntBASIC-0.02□□□□□ -2.41
CLDN20P56880 SNORA63.4-201ENST00000362763 126 ntBASIC-0.03□□□□□ -2.41
CLDN20P56880 SNORD114-16-201ENST00000363044 70 ntBASIC-0.03□□□□□ -2.41
CLDN20P56880 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.03□□□□□ -2.41
CLDN20P56880 RNA5SP163-201ENST00000410304 99 ntBASIC-0.03□□□□□ -2.41
CLDN20P56880 RNU7-159P-201ENST00000459284 62 ntBASIC-0.03□□□□□ -2.41
CLDN20P56880 RNU6-162P-201ENST00000516228 103 ntBASIC-0.03□□□□□ -2.41
CLDN20P56880 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.03□□□□□ -2.41
CLDN20P56880 MIR5190-201ENST00000581537 80 ntBASIC-0.03□□□□□ -2.41
CLDN20P56880 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.03□□□□□ -2.41
CLDN20P56880 MIR371B-201ENST00000638082 66 ntBASIC-0.03□□□□□ -2.41
CLDN20P56880 SNORA63.2-201ENST00000362603 126 ntBASIC-0.04□□□□□ -2.42
CLDN20P56880 RNU6-180P-201ENST00000516697 61 ntBASIC-0.04□□□□□ -2.42
CLDN20P56880 AC026421.1-201ENST00000519101 163 ntBASIC-0.04□□□□□ -2.42
CLDN20P56880 MIR548AE1-201ENST00000583292 70 ntBASIC-0.04□□□□□ -2.42
CLDN20P56880 AP001318.4-201ENST00000616637 121 ntBASIC-0.04□□□□□ -2.42
CLDN20P56880 SNORD114-29-201ENST00000364819 70 ntBASIC-0.05□□□□□ -2.42
CLDN20P56880 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.05□□□□□ -2.42
CLDN20P56880 RNU6-154P-201ENST00000384306 106 ntBASIC-0.05□□□□□ -2.42
CLDN20P56880 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.05□□□□□ -2.42
CLDN20P56880 RNU7-165P-201ENST00000458864 60 ntBASIC-0.05□□□□□ -2.42
CLDN20P56880 FGF7P7-201ENST00000514120 227 ntBASIC-0.05□□□□□ -2.42
CLDN20P56880 SNORA40.13-201ENST00000516379 120 ntBASIC-0.05□□□□□ -2.42
CLDN20P56880 RNU6-32P-201ENST00000383948 107 ntBASIC-0.06□□□□□ -2.42
CLDN20P56880 RNU6-13P-201ENST00000384248 107 ntBASIC-0.06□□□□□ -2.42
CLDN20P56880 RNU6-12P-201ENST00000384604 107 ntBASIC-0.06□□□□□ -2.42
CLDN20P56880 RNU6-41P-201ENST00000384741 107 ntBASIC-0.06□□□□□ -2.42
CLDN20P56880 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
CLDN20P56880 RNA5SP292-201ENST00000390974 118 ntBASIC-0.06□□□□□ -2.42
CLDN20P56880 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.06□□□□□ -2.42
CLDN20P56880 RNU6-719P-201ENST00000516671 104 ntBASIC-0.06□□□□□ -2.42
CLDN20P56880 RNU7-188P-201ENST00000517063 64 ntBASIC-0.06□□□□□ -2.42
CLDN20P56880 CR383656.4-201ENST00000546909 122 ntBASIC-0.06□□□□□ -2.42
CLDN20P56880 RNU4-32P-201ENST00000363404 141 ntBASIC-0.07□□□□□ -2.42
CLDN20P56880 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.07□□□□□ -2.42
CLDN20P56880 RNY4P3-201ENST00000365254 95 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms