Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 Y_RNA.491-201ENST00000384417 107 ntBASIC0.54□□□□□ -2.32
COPB1P53618 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
COPB1P53618 MIR1236-201ENST00000408340 102 ntBASIC0.54□□□□□ -2.32
COPB1P53618 AC069271.1-201ENST00000445577 156 ntBASIC0.54□□□□□ -2.32
COPB1P53618 RNU7-74P-201ENST00000459104 62 ntBASIC0.54□□□□□ -2.32
COPB1P53618 RNU6-229P-201ENST00000516614 102 ntBASIC0.54□□□□□ -2.32
COPB1P53618 SNORA18.5-201ENST00000516616 101 ntBASIC0.54□□□□□ -2.32
COPB1P53618 RNU1-29P-201ENST00000606574 126 ntBASIC0.54□□□□□ -2.32
COPB1P53618 MIR8087-201ENST00000612745 78 ntBASIC0.54□□□□□ -2.32
COPB1P53618 RNU7-153P-201ENST00000516455 62 ntBASIC0.53□□□□□ -2.32
COPB1P53618 Y_RNA.558-201ENST00000384685 113 ntBASIC0.52□□□□□ -2.33
COPB1P53618 MIR519C-201ENST00000385053 87 ntBASIC0.52□□□□□ -2.33
COPB1P53618 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
COPB1P53618 SNORD71-201ENST00000411292 86 ntBASIC0.52□□□□□ -2.33
COPB1P53618 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.52□□□□□ -2.33
COPB1P53618 Y_RNA.30-201ENST00000362572 97 ntBASIC0.51□□□□□ -2.33
COPB1P53618 SNORD44.1-201ENST00000363202 61 ntBASIC0.51□□□□□ -2.33
COPB1P53618 RNU1-141P-201ENST00000364623 158 ntBASIC0.51□□□□□ -2.33
COPB1P53618 RNA5SP193-201ENST00000410353 107 ntBASIC0.51□□□□□ -2.33
COPB1P53618 RNU2-59P-201ENST00000410482 191 ntBASIC0.51□□□□□ -2.33
COPB1P53618 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.51□□□□□ -2.33
COPB1P53618 RNA5SP121-201ENST00000516537 101 ntBASIC0.51□□□□□ -2.33
COPB1P53618 RNA5SP330-201ENST00000517096 96 ntBASIC0.51□□□□□ -2.33
COPB1P53618 AC243829.6-201ENST00000612652 106 ntBASIC0.51□□□□□ -2.33
COPB1P53618 MIR330-201ENST00000362196 94 ntBASIC0.5□□□□□ -2.33
COPB1P53618 MIR451A-201ENST00000385059 72 ntBASIC0.5□□□□□ -2.33
COPB1P53618 SNORD90-201ENST00000391145 111 ntBASIC0.5□□□□□ -2.33
COPB1P53618 AC114737.2-201ENST00000421583 173 ntBASIC0.5□□□□□ -2.33
COPB1P53618 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.5□□□□□ -2.33
COPB1P53618 SNORA68.3-201ENST00000515906 83 ntBASIC0.5□□□□□ -2.33
COPB1P53618 MIR4752-201ENST00000579672 72 ntBASIC0.5□□□□□ -2.33
COPB1P53618 MIR548BB-201ENST00000626714 66 ntBASIC0.5□□□□□ -2.33
COPB1P53618 SNORA50A-201ENST00000384225 134 ntBASIC0.49□□□□□ -2.33
COPB1P53618 RNA5SP484-201ENST00000458857 111 ntBASIC0.49□□□□□ -2.33
COPB1P53618 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.49□□□□□ -2.33
COPB1P53618 MIR4796-201ENST00000580742 81 ntBASIC0.49□□□□□ -2.33
COPB1P53618 AC073869.9-201ENST00000641610 120 ntBASIC0.49□□□□□ -2.33
COPB1P53618 RNU6-1051P-201ENST00000365471 102 ntBASIC0.48□□□□□ -2.33
COPB1P53618 MIR450A2-201ENST00000385022 100 ntBASIC0.48□□□□□ -2.33
COPB1P53618 U3.27-201ENST00000391237 200 ntBASIC0.48□□□□□ -2.33
COPB1P53618 RNU6-762P-201ENST00000517107 102 ntBASIC0.48□□□□□ -2.33
COPB1P53618 RNU6-1057P-201ENST00000517162 102 ntBASIC0.48□□□□□ -2.33
COPB1P53618 AC006254.2-201ENST00000603259 279 ntBASIC0.48□□□□□ -2.33
COPB1P53618 SNORA70.25-201ENST00000612741 95 ntBASIC0.48□□□□□ -2.33
COPB1P53618 MIR6755-201ENST00000619993 66 ntBASIC0.48□□□□□ -2.33
COPB1P53618 SNORA63.2-201ENST00000362603 126 ntBASIC0.47□□□□□ -2.33
COPB1P53618 AC093729.1-201ENST00000513074 128 ntBASIC0.47□□□□□ -2.33
COPB1P53618 RNU6-848P-201ENST00000515948 107 ntBASIC0.47□□□□□ -2.33
COPB1P53618 RNU6-617P-201ENST00000516147 107 ntBASIC0.47□□□□□ -2.33
COPB1P53618 RNU6-473P-201ENST00000516164 107 ntBASIC0.47□□□□□ -2.33
COPB1P53618 RNU6-1049P-201ENST00000516414 107 ntBASIC0.47□□□□□ -2.33
COPB1P53618 MIR3140-201ENST00000583685 90 ntBASIC0.47□□□□□ -2.33
COPB1P53618 IGLL4P-201ENST00000614590 133 ntBASIC0.47□□□□□ -2.33
COPB1P53618 AL109933.3-201ENST00000619095 188 ntBASIC0.47□□□□□ -2.33
COPB1P53618 MIRLET7D-201ENST00000362263 87 ntBASIC0.46□□□□□ -2.34
COPB1P53618 Y_RNA.73-201ENST00000362910 113 ntBASIC0.46□□□□□ -2.34
COPB1P53618 RNY1P1-201ENST00000364372 112 ntBASIC0.46□□□□□ -2.34
COPB1P53618 SNORD73B-201ENST00000364394 72 ntBASIC0.46□□□□□ -2.34
COPB1P53618 VTRNA1-3-201ENST00000365645 89 ntBASIC0.46□□□□□ -2.34
COPB1P53618 SNORA24B-201ENST00000384176 131 ntBASIC0.46□□□□□ -2.34
COPB1P53618 RNU6-863P-201ENST00000515989 104 ntBASIC0.46□□□□□ -2.34
COPB1P53618 SNORA62.5-201ENST00000516634 120 ntBASIC0.46□□□□□ -2.34
COPB1P53618 NAMPTP3-201ENST00000569273 224 ntBASIC0.46□□□□□ -2.34
COPB1P53618 MIR548O2-201ENST00000616090 70 ntBASIC0.46□□□□□ -2.34
COPB1P53618 Y_RNA.258-201ENST00000364613 105 ntBASIC0.45□□□□□ -2.34
COPB1P53618 MT-TY-201ENST00000387409 66 ntBASIC0.45□□□□□ -2.34
COPB1P53618 MIR216B-201ENST00000390186 82 ntBASIC0.45□□□□□ -2.34
COPB1P53618 Y_RNA.611-201ENST00000410682 108 ntBASIC0.45□□□□□ -2.34
COPB1P53618 FGF7P7-201ENST00000514120 227 ntBASIC0.45□□□□□ -2.34
COPB1P53618 SNORA25.13-201ENST00000516395 103 ntBASIC0.45□□□□□ -2.34
COPB1P53618 AC140658.3-201ENST00000567603 271 ntBASIC0.45□□□□□ -2.34
COPB1P53618 MIR5706-201ENST00000579841 80 ntBASIC0.45□□□□□ -2.34
COPB1P53618 AC062037.1-201ENST00000605302 128 ntBASIC0.45□□□□□ -2.34
COPB1P53618 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.45□□□□□ -2.34
COPB1P53618 MIR4679-1-201ENST00000637619 75 ntBASIC0.45□□□□□ -2.34
COPB1P53618 AC006160.2-201ENST00000637708 154 ntBASIC0.45□□□□□ -2.34
COPB1P53618 MIR103A1-201ENST00000362165 78 ntBASIC0.44□□□□□ -2.34
COPB1P53618 RNU6-979P-201ENST00000383896 107 ntBASIC0.44□□□□□ -2.34
COPB1P53618 RNU6-820P-201ENST00000384273 107 ntBASIC0.44□□□□□ -2.34
COPB1P53618 RNU6-1052P-201ENST00000411398 104 ntBASIC0.44□□□□□ -2.34
COPB1P53618 RNU6-719P-201ENST00000516671 104 ntBASIC0.44□□□□□ -2.34
COPB1P53618 MIR4460-201ENST00000577862 86 ntBASIC0.44□□□□□ -2.34
COPB1P53618 MIR5588-201ENST00000581890 63 ntBASIC0.44□□□□□ -2.34
COPB1P53618 AC069503.3-201ENST00000618674 145 ntBASIC0.44□□□□□ -2.34
COPB1P53618 MIR494-201ENST00000349529 81 ntBASIC0.43□□□□□ -2.34
COPB1P53618 SNORD115-37-201ENST00000363768 82 ntBASIC0.43□□□□□ -2.34
COPB1P53618 Y_RNA.423-201ENST00000384057 113 ntBASIC0.43□□□□□ -2.34
COPB1P53618 RNU6-1232P-201ENST00000516299 86 ntBASIC0.43□□□□□ -2.34
COPB1P53618 RNU6-624P-201ENST00000363411 107 ntBASIC0.42□□□□□ -2.34
COPB1P53618 SNORA2A-201ENST00000383885 135 ntBASIC0.42□□□□□ -2.34
COPB1P53618 SNORD110-201ENST00000408189 75 ntBASIC0.42□□□□□ -2.34
COPB1P53618 AC006210.1-201ENST00000424882 111 ntBASIC0.42□□□□□ -2.34
COPB1P53618 snoU13.17-201ENST00000458802 104 ntBASIC0.42□□□□□ -2.34
COPB1P53618 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
COPB1P53618 RNA5SP257-201ENST00000363023 116 ntBASIC0.41□□□□□ -2.34
COPB1P53618 RNY4P3-201ENST00000365254 95 ntBASIC0.41□□□□□ -2.34
COPB1P53618 MIR1197-201ENST00000408818 88 ntBASIC0.41□□□□□ -2.34
COPB1P53618 AC022137.1-201ENST00000483735 151 ntBASIC0.41□□□□□ -2.34
COPB1P53618 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.41□□□□□ -2.34
COPB1P53618 RNU6-1152P-201ENST00000384576 107 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 202.6 ms