Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 MIR4290-201ENST00000583807 95 ntBASIC0.06□□□□□ -2.4
LBX1P52954 AC104408.1-201ENST00000605241 170 ntBASIC0.06□□□□□ -2.4
LBX1P52954 Y_RNA.283-201ENST00000364798 112 ntBASIC0.05□□□□□ -2.4
LBX1P52954 RNU6-1107P-201ENST00000364817 104 ntBASIC0.05□□□□□ -2.4
LBX1P52954 RNU6-1014P-201ENST00000383940 103 ntBASIC0.05□□□□□ -2.4
LBX1P52954 RNU6-22P-201ENST00000384355 107 ntBASIC0.05□□□□□ -2.4
LBX1P52954 MIR181B2-201ENST00000385004 89 ntBASIC0.05□□□□□ -2.4
LBX1P52954 Y_RNA.596-201ENST00000410462 109 ntBASIC0.05□□□□□ -2.4
LBX1P52954 AC109327.2-201ENST00000448339 378 ntBASIC0.05□□□□□ -2.4
LBX1P52954 RNU6-537P-201ENST00000517277 103 ntBASIC0.05□□□□□ -2.4
LBX1P52954 U7.6-201ENST00000610841 64 ntBASIC0.05□□□□□ -2.4
LBX1P52954 MIR499B-201ENST00000636498 73 ntBASIC0.05□□□□□ -2.4
LBX1P52954 RNU6-834P-201ENST00000362367 110 ntBASIC0.04□□□□□ -2.4
LBX1P52954 SNORD114-5-201ENST00000362928 70 ntBASIC0.04□□□□□ -2.4
LBX1P52954 Y_RNA.95-201ENST00000363079 95 ntBASIC0.04□□□□□ -2.4
LBX1P52954 RNA5SP214-201ENST00000363378 118 ntBASIC0.04□□□□□ -2.4
LBX1P52954 RNU6-1125P-201ENST00000363601 107 ntBASIC0.04□□□□□ -2.4
LBX1P52954 RNU6-480P-201ENST00000384332 107 ntBASIC0.04□□□□□ -2.4
LBX1P52954 RNU6-476P-201ENST00000384726 107 ntBASIC0.04□□□□□ -2.4
LBX1P52954 MIR643-201ENST00000385267 97 ntBASIC0.04□□□□□ -2.4
LBX1P52954 MIR876-201ENST00000401147 81 ntBASIC0.04□□□□□ -2.4
LBX1P52954 AC006210.1-201ENST00000424882 111 ntBASIC0.04□□□□□ -2.4
LBX1P52954 RNU6-287P-201ENST00000516230 98 ntBASIC0.04□□□□□ -2.4
LBX1P52954 RNU6-479P-201ENST00000516348 105 ntBASIC0.04□□□□□ -2.4
LBX1P52954 MIR3925-201ENST00000584674 77 ntBASIC0.04□□□□□ -2.4
LBX1P52954 AC025521.1-201ENST00000621624 286 ntBASIC0.04□□□□□ -2.4
LBX1P52954 Y_RNA.163-201ENST00000363702 113 ntBASIC0.03□□□□□ -2.4
LBX1P52954 Y_RNA.207-201ENST00000364142 106 ntBASIC0.03□□□□□ -2.4
LBX1P52954 SNORA32.1-201ENST00000364514 115 ntBASIC0.03□□□□□ -2.4
LBX1P52954 SNORD45B-201ENST00000364617 72 ntBASIC0.03□□□□□ -2.4
LBX1P52954 SNORA51.5-201ENST00000384126 131 ntBASIC0.03□□□□□ -2.4
LBX1P52954 SNORD110-201ENST00000408189 75 ntBASIC0.03□□□□□ -2.4
LBX1P52954 RNU6-904P-201ENST00000516206 101 ntBASIC0.03□□□□□ -2.4
LBX1P52954 SNORA25.13-201ENST00000516395 103 ntBASIC0.03□□□□□ -2.4
LBX1P52954 AC069503.3-201ENST00000618674 145 ntBASIC0.03□□□□□ -2.4
LBX1P52954 AC132825.6-201ENST00000638861 357 ntBASIC0.03□□□□□ -2.4
LBX1P52954 RNU6-466P-201ENST00000391224 103 ntBASIC0.02□□□□□ -2.41
LBX1P52954 RNU6-412P-201ENST00000516434 106 ntBASIC0.02□□□□□ -2.41
LBX1P52954 RNU6-589P-201ENST00000516485 107 ntBASIC0.02□□□□□ -2.41
LBX1P52954 MIR4777-201ENST00000583710 86 ntBASIC0.02□□□□□ -2.41
LBX1P52954 RNY4P27-201ENST00000363341 96 ntBASIC0.01□□□□□ -2.41
LBX1P52954 RNU6-1117P-201ENST00000384525 104 ntBASIC0.01□□□□□ -2.41
LBX1P52954 MIR587-201ENST00000384845 96 ntBASIC0.01□□□□□ -2.41
LBX1P52954 MIR4696-201ENST00000581431 70 ntBASIC0.01□□□□□ -2.41
LBX1P52954 RN7SL660P-201ENST00000614852 299 ntBASIC0.01□□□□□ -2.41
LBX1P52954 Y_RNA.601-201ENST00000410500 113 ntBASIC0□□□□□ -2.41
LBX1P52954 SNORA19.1-201ENST00000410656 129 ntBASIC0□□□□□ -2.41
LBX1P52954 RNU7-85P-201ENST00000458851 63 ntBASIC0□□□□□ -2.41
LBX1P52954 AL513043.2-201ENST00000573941 143 ntBASIC0□□□□□ -2.41
LBX1P52954 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC0□□□□□ -2.41
LBX1P52954 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0□□□□□ -2.41
LBX1P52954 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.01□□□□□ -2.41
LBX1P52954 RNU6-756P-201ENST00000383997 107 ntBASIC-0.01□□□□□ -2.41
LBX1P52954 MIR145-201ENST00000384967 88 ntBASIC-0.01□□□□□ -2.41
LBX1P52954 MT-TY-201ENST00000387409 66 ntBASIC-0.01□□□□□ -2.41
LBX1P52954 MIR548Z-201ENST00000584743 97 ntBASIC-0.01□□□□□ -2.41
LBX1P52954 RNU6-86P-201ENST00000606534 107 ntBASIC-0.01□□□□□ -2.41
LBX1P52954 RNU6-664P-201ENST00000362381 107 ntBASIC-0.02□□□□□ -2.41
LBX1P52954 SNORD101-201ENST00000384027 73 ntBASIC-0.02□□□□□ -2.41
LBX1P52954 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.02□□□□□ -2.41
LBX1P52954 RNU6-813P-201ENST00000384691 107 ntBASIC-0.02□□□□□ -2.41
LBX1P52954 MIR610-201ENST00000385139 96 ntBASIC-0.02□□□□□ -2.41
LBX1P52954 MIR892B-201ENST00000401279 77 ntBASIC-0.02□□□□□ -2.41
LBX1P52954 MIR378F-201ENST00000578143 78 ntBASIC-0.02□□□□□ -2.41
LBX1P52954 AC012531.4-201ENST00000616509 177 ntBASIC-0.02□□□□□ -2.41
LBX1P52954 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.03□□□□□ -2.41
LBX1P52954 RNU4-36P-201ENST00000364294 144 ntBASIC-0.03□□□□□ -2.41
LBX1P52954 RNU6-106P-201ENST00000384405 107 ntBASIC-0.03□□□□□ -2.41
LBX1P52954 RNU6-644P-201ENST00000391155 98 ntBASIC-0.03□□□□□ -2.41
LBX1P52954 RNU6-935P-201ENST00000410371 100 ntBASIC-0.03□□□□□ -2.41
LBX1P52954 RNU6-554P-201ENST00000410466 106 ntBASIC-0.03□□□□□ -2.41
LBX1P52954 RNU7-165P-201ENST00000458864 60 ntBASIC-0.03□□□□□ -2.41
LBX1P52954 MIR6129-201ENST00000616087 109 ntBASIC-0.03□□□□□ -2.41
LBX1P52954 MIR593-201ENST00000384856 100 ntBASIC-0.04□□□□□ -2.42
LBX1P52954 SNORA75.1-201ENST00000391130 148 ntBASIC-0.04□□□□□ -2.42
LBX1P52954 RNU6-406P-201ENST00000516470 107 ntBASIC-0.04□□□□□ -2.42
LBX1P52954 RNU6-62P-201ENST00000516526 102 ntBASIC-0.04□□□□□ -2.42
LBX1P52954 RNU6-180P-201ENST00000516697 61 ntBASIC-0.04□□□□□ -2.42
LBX1P52954 MIR365A-201ENST00000362260 87 ntBASIC-0.05□□□□□ -2.42
LBX1P52954 RNU2-51P-201ENST00000410708 197 ntBASIC-0.05□□□□□ -2.42
LBX1P52954 RNU6-795P-201ENST00000516323 103 ntBASIC-0.05□□□□□ -2.42
LBX1P52954 RNA5SP461-201ENST00000516451 104 ntBASIC-0.05□□□□□ -2.42
LBX1P52954 MIR548AE1-201ENST00000583292 70 ntBASIC-0.05□□□□□ -2.42
LBX1P52954 AC103810.7-201ENST00000607821 91 ntBASIC-0.05□□□□□ -2.42
LBX1P52954 MIR548O2-201ENST00000616090 70 ntBASIC-0.05□□□□□ -2.42
LBX1P52954 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.05□□□□□ -2.42
LBX1P52954 RNU6-652P-201ENST00000365488 107 ntBASIC-0.06□□□□□ -2.42
LBX1P52954 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.06□□□□□ -2.42
LBX1P52954 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.06□□□□□ -2.42
LBX1P52954 SCARNA23-201ENST00000516060 130 ntBASIC-0.06□□□□□ -2.42
LBX1P52954 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.06□□□□□ -2.42
LBX1P52954 RNU6-313P-201ENST00000516317 112 ntBASIC-0.06□□□□□ -2.42
LBX1P52954 MIR148A-201ENST00000362215 68 ntBASIC-0.07□□□□□ -2.42
LBX1P52954 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.07□□□□□ -2.42
LBX1P52954 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.07□□□□□ -2.42
LBX1P52954 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.07□□□□□ -2.42
LBX1P52954 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.07□□□□□ -2.42
LBX1P52954 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.07□□□□□ -2.42
LBX1P52954 MIR4460-201ENST00000577862 86 ntBASIC-0.07□□□□□ -2.42
LBX1P52954 YWHAEP2-201ENST00000580066 112 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 178.5 ms