Protein–RNA interactions for Protein: P48436

SOX9, Transcription factor SOX-9, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9P48436 AC010487.4-201ENST00000637027 61 ntBASIC0.81□□□□□ -2.28
SOX9P48436 RNU6-242P-201ENST00000384359 107 ntBASIC0.8□□□□□ -2.28
SOX9P48436 MIR508-201ENST00000384857 115 ntBASIC0.8□□□□□ -2.28
SOX9P48436 MIR6835-201ENST00000621552 64 ntBASIC0.8□□□□□ -2.28
SOX9P48436 RNU7-153P-201ENST00000516455 62 ntBASIC0.79□□□□□ -2.28
SOX9P48436 AC018659.1-201ENST00000551083 169 ntBASIC0.79□□□□□ -2.28
SOX9P48436 AC073869.9-201ENST00000641610 120 ntBASIC0.79□□□□□ -2.28
SOX9P48436 SNORD114-2-201ENST00000363953 78 ntBASIC0.78□□□□□ -2.28
SOX9P48436 RNU6-945P-201ENST00000383947 107 ntBASIC0.78□□□□□ -2.28
SOX9P48436 Y_RNA.426-201ENST00000384068 113 ntBASIC0.78□□□□□ -2.28
SOX9P48436 SNORA26.2-201ENST00000390922 122 ntBASIC0.78□□□□□ -2.28
SOX9P48436 RNU6-269P-201ENST00000391077 97 ntBASIC0.78□□□□□ -2.28
SOX9P48436 FGF7P7-201ENST00000514120 227 ntBASIC0.78□□□□□ -2.28
SOX9P48436 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.78□□□□□ -2.28
SOX9P48436 RN7SKP12-201ENST00000516275 143 ntBASIC0.78□□□□□ -2.28
SOX9P48436 RNA5SP121-201ENST00000516537 101 ntBASIC0.78□□□□□ -2.28
SOX9P48436 MIR548AG2-201ENST00000581228 64 ntBASIC0.78□□□□□ -2.28
SOX9P48436 AL162376.1-201ENST00000624117 175 ntBASIC0.78□□□□□ -2.28
SOX9P48436 MIR4679-1-201ENST00000637619 75 ntBASIC0.78□□□□□ -2.28
SOX9P48436 Y_RNA.73-201ENST00000362910 113 ntBASIC0.77□□□□□ -2.29
SOX9P48436 MIR518A1-201ENST00000385068 85 ntBASIC0.77□□□□□ -2.29
SOX9P48436 MIR519E-201ENST00000385075 84 ntBASIC0.77□□□□□ -2.29
SOX9P48436 U3.27-201ENST00000391237 200 ntBASIC0.77□□□□□ -2.29
SOX9P48436 MIR1302-4-201ENST00000408701 150 ntBASIC0.77□□□□□ -2.29
SOX9P48436 RNU5F-1-201ENST00000362507 117 ntBASIC0.76□□□□□ -2.29
SOX9P48436 SNORD118-201ENST00000363593 134 ntBASIC0.76□□□□□ -2.29
SOX9P48436 Y_RNA.433-201ENST00000384089 102 ntBASIC0.76□□□□□ -2.29
SOX9P48436 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
SOX9P48436 MIR936-201ENST00000401264 98 ntBASIC0.76□□□□□ -2.29
SOX9P48436 AC022137.1-201ENST00000483735 151 ntBASIC0.76□□□□□ -2.29
SOX9P48436 RNU6-351P-201ENST00000516097 100 ntBASIC0.76□□□□□ -2.29
SOX9P48436 RNA5SP330-201ENST00000517096 96 ntBASIC0.76□□□□□ -2.29
SOX9P48436 RNU6-1051P-201ENST00000365471 102 ntBASIC0.75□□□□□ -2.29
SOX9P48436 AC062037.1-201ENST00000605302 128 ntBASIC0.75□□□□□ -2.29
SOX9P48436 AC006160.2-201ENST00000637708 154 ntBASIC0.75□□□□□ -2.29
SOX9P48436 MIR6866-201ENST00000638146 69 ntBASIC0.75□□□□□ -2.29
SOX9P48436 SNORA25.13-201ENST00000516395 103 ntBASIC0.74□□□□□ -2.29
SOX9P48436 RNU4-54P-201ENST00000516428 129 ntBASIC0.74□□□□□ -2.29
SOX9P48436 MIR4460-201ENST00000577862 86 ntBASIC0.74□□□□□ -2.29
SOX9P48436 MIR5588-201ENST00000581890 63 ntBASIC0.74□□□□□ -2.29
SOX9P48436 AL109933.3-201ENST00000619095 188 ntBASIC0.74□□□□□ -2.29
SOX9P48436 SNORA63.2-201ENST00000362603 126 ntBASIC0.73□□□□□ -2.29
SOX9P48436 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.73□□□□□ -2.29
SOX9P48436 RNU2-59P-201ENST00000410482 191 ntBASIC0.73□□□□□ -2.29
SOX9P48436 RNA5SP257-201ENST00000363023 116 ntBASIC0.72□□□□□ -2.29
SOX9P48436 RNU6-497P-201ENST00000365316 104 ntBASIC0.72□□□□□ -2.29
SOX9P48436 RNU6-1052P-201ENST00000411398 104 ntBASIC0.72□□□□□ -2.29
SOX9P48436 AC069271.1-201ENST00000445577 156 ntBASIC0.72□□□□□ -2.29
SOX9P48436 RNU6-719P-201ENST00000516671 104 ntBASIC0.72□□□□□ -2.29
SOX9P48436 MIR8087-201ENST00000612745 78 ntBASIC0.72□□□□□ -2.29
SOX9P48436 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
SOX9P48436 Y_RNA.258-201ENST00000364613 105 ntBASIC0.71□□□□□ -2.3
SOX9P48436 RNU1-141P-201ENST00000364623 158 ntBASIC0.71□□□□□ -2.3
SOX9P48436 RNY4P29-201ENST00000410801 97 ntBASIC0.71□□□□□ -2.3
SOX9P48436 AC006210.1-201ENST00000424882 111 ntBASIC0.71□□□□□ -2.3
SOX9P48436 NAMPTP3-201ENST00000569273 224 ntBASIC0.71□□□□□ -2.3
SOX9P48436 RNA5SP193-201ENST00000410353 107 ntBASIC0.7□□□□□ -2.3
SOX9P48436 RNA5SP484-201ENST00000458857 111 ntBASIC0.7□□□□□ -2.3
SOX9P48436 RNU6-979P-201ENST00000383896 107 ntBASIC0.69□□□□□ -2.3
SOX9P48436 Y_RNA.607-201ENST00000410597 98 ntBASIC0.69□□□□□ -2.3
SOX9P48436 AC098934.3-201ENST00000430450 190 ntBASIC0.69□□□□□ -2.3
SOX9P48436 RNA5SP62-201ENST00000363457 110 ntBASIC0.68□□□□□ -2.3
SOX9P48436 RNU6-1276P-201ENST00000365372 104 ntBASIC0.68□□□□□ -2.3
SOX9P48436 SNORD110-201ENST00000408189 75 ntBASIC0.68□□□□□ -2.3
SOX9P48436 RNU6-863P-201ENST00000515989 104 ntBASIC0.68□□□□□ -2.3
SOX9P48436 AC140658.3-201ENST00000567603 271 ntBASIC0.68□□□□□ -2.3
SOX9P48436 MIR3140-201ENST00000583685 90 ntBASIC0.68□□□□□ -2.3
SOX9P48436 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.68□□□□□ -2.3
SOX9P48436 MIR330-201ENST00000362196 94 ntBASIC0.67□□□□□ -2.3
SOX9P48436 RNA5SP347-201ENST00000362445 119 ntBASIC0.67□□□□□ -2.3
SOX9P48436 SNORA2A-201ENST00000383885 135 ntBASIC0.67□□□□□ -2.3
SOX9P48436 Y_RNA.423-201ENST00000384057 113 ntBASIC0.67□□□□□ -2.3
SOX9P48436 AL450471.1-201ENST00000447509 127 ntBASIC0.67□□□□□ -2.3
SOX9P48436 RNA5SP395-201ENST00000516567 118 ntBASIC0.67□□□□□ -2.3
SOX9P48436 MIR4711-201ENST00000578274 70 ntBASIC0.67□□□□□ -2.3
SOX9P48436 MIR4752-201ENST00000579672 72 ntBASIC0.67□□□□□ -2.3
SOX9P48436 RNA5SP499-201ENST00000363982 119 ntBASIC0.66□□□□□ -2.3
SOX9P48436 AC093423.1-201ENST00000440817 142 ntBASIC0.66□□□□□ -2.3
SOX9P48436 SNORA72.7-201ENST00000516349 94 ntBASIC0.66□□□□□ -2.3
SOX9P48436 RNU6-229P-201ENST00000516614 102 ntBASIC0.66□□□□□ -2.3
SOX9P48436 U7.6-201ENST00000610841 64 ntBASIC0.66□□□□□ -2.3
SOX9P48436 AC069503.3-201ENST00000618674 145 ntBASIC0.66□□□□□ -2.3
SOX9P48436 MT-TY-201ENST00000387409 66 ntBASIC0.65□□□□□ -2.31
SOX9P48436 RNU7-171P-201ENST00000459581 62 ntBASIC0.65□□□□□ -2.31
SOX9P48436 MIR5706-201ENST00000579841 80 ntBASIC0.65□□□□□ -2.31
SOX9P48436 MIR548O2-201ENST00000616090 70 ntBASIC0.65□□□□□ -2.31
SOX9P48436 Y_RNA.264-201ENST00000364665 102 ntBASIC0.64□□□□□ -2.31
SOX9P48436 SNORD77.2-201ENST00000391045 68 ntBASIC0.64□□□□□ -2.31
SOX9P48436 SNORD90-201ENST00000391145 111 ntBASIC0.64□□□□□ -2.31
SOX9P48436 AC243829.3-201ENST00000622177 108 ntBASIC0.64□□□□□ -2.31
SOX9P48436 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
SOX9P48436 RNU6-208P-201ENST00000362431 107 ntBASIC0.63□□□□□ -2.31
SOX9P48436 RNU6-1152P-201ENST00000384576 107 ntBASIC0.63□□□□□ -2.31
SOX9P48436 Y_RNA.660-201ENST00000516002 120 ntBASIC0.63□□□□□ -2.31
SOX9P48436 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.63□□□□□ -2.31
SOX9P48436 YWHAEP2-201ENST00000580066 112 ntBASIC0.63□□□□□ -2.31
SOX9P48436 RNU6V-201ENST00000384105 107 ntBASIC0.62□□□□□ -2.31
SOX9P48436 RNU6-1177P-201ENST00000391058 104 ntBASIC0.62□□□□□ -2.31
SOX9P48436 MIR1197-201ENST00000408818 88 ntBASIC0.62□□□□□ -2.31
SOX9P48436 RNU6-848P-201ENST00000515948 107 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms