Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.88□□□□□ -2.55
BRCA1P38398 RNU6-337P-201ENST00000391243 106 ntBASIC-0.88□□□□□ -2.55
BRCA1P38398 RNU6-935P-201ENST00000410371 100 ntBASIC-0.88□□□□□ -2.55
BRCA1P38398 SNORA7.5-201ENST00000410672 110 ntBASIC-0.88□□□□□ -2.55
BRCA1P38398 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.89□□□□□ -2.55
BRCA1P38398 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.89□□□□□ -2.55
BRCA1P38398 RNU6-54P-201ENST00000365563 107 ntBASIC-0.89□□□□□ -2.55
BRCA1P38398 AC097510.1-201ENST00000510945 133 ntBASIC-0.89□□□□□ -2.55
BRCA1P38398 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.89□□□□□ -2.55
BRCA1P38398 YWHAEP3-201ENST00000582767 121 ntBASIC-0.89□□□□□ -2.55
BRCA1P38398 AC145423.2-201ENST00000610631 239 ntBASIC-0.89□□□□□ -2.55
BRCA1P38398 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.9□□□□□ -2.55
BRCA1P38398 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.9□□□□□ -2.55
BRCA1P38398 RNU6-476P-201ENST00000384726 107 ntBASIC-0.9□□□□□ -2.55
BRCA1P38398 SNORD83B-201ENST00000386745 93 ntBASIC-0.9□□□□□ -2.55
BRCA1P38398 RNU7-197P-201ENST00000458836 62 ntBASIC-0.9□□□□□ -2.55
BRCA1P38398 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.9□□□□□ -2.55
BRCA1P38398 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.9□□□□□ -2.55
BRCA1P38398 RNY1P11-201ENST00000363759 113 ntBASIC-0.9□□□□□ -2.55
BRCA1P38398 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.9□□□□□ -2.55
BRCA1P38398 AL513043.2-201ENST00000573941 143 ntBASIC-0.91□□□□□ -2.56
BRCA1P38398 SNORD115-25-201ENST00000362619 82 ntBASIC-0.92□□□□□ -2.56
BRCA1P38398 RNU4-11P-201ENST00000365287 132 ntBASIC-0.92□□□□□ -2.56
BRCA1P38398 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.92□□□□□ -2.56
BRCA1P38398 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.92□□□□□ -2.56
BRCA1P38398 RNU7-24P-201ENST00000458867 62 ntBASIC-0.92□□□□□ -2.56
BRCA1P38398 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.92□□□□□ -2.56
BRCA1P38398 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.92□□□□□ -2.56
BRCA1P38398 RNU6-973P-201ENST00000364690 107 ntBASIC-0.92□□□□□ -2.56
BRCA1P38398 RNU6-915P-201ENST00000364943 103 ntBASIC-0.92□□□□□ -2.56
BRCA1P38398 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.92□□□□□ -2.56
BRCA1P38398 MTATP6P29-201ENST00000415057 132 ntBASIC-0.92□□□□□ -2.56
BRCA1P38398 SNORD42B-201ENST00000458893 67 ntBASIC-0.92□□□□□ -2.56
BRCA1P38398 RNU6-1045P-201ENST00000516321 107 ntBASIC-0.92□□□□□ -2.56
BRCA1P38398 MIR6773-201ENST00000612812 74 ntBASIC-0.92□□□□□ -2.56
BRCA1P38398 AP001340.1-201ENST00000624405 217 ntBASIC-0.92□□□□□ -2.56
BRCA1P38398 SNORD114-25-201ENST00000363742 72 ntBASIC-0.93□□□□□ -2.56
BRCA1P38398 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.93□□□□□ -2.56
BRCA1P38398 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.93□□□□□ -2.56
BRCA1P38398 AC025521.1-201ENST00000621624 286 ntBASIC-0.93□□□□□ -2.56
BRCA1P38398 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.94□□□□□ -2.56
BRCA1P38398 RNU6-682P-201ENST00000363843 106 ntBASIC-0.94□□□□□ -2.56
BRCA1P38398 AC022137.1-201ENST00000483735 151 ntBASIC-0.94□□□□□ -2.56
BRCA1P38398 RNU6-762P-201ENST00000517107 102 ntBASIC-0.94□□□□□ -2.56
BRCA1P38398 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.95□□□□□ -2.56
BRCA1P38398 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.95□□□□□ -2.56
BRCA1P38398 snoU13.13-201ENST00000458842 104 ntBASIC-0.95□□□□□ -2.56
BRCA1P38398 AC025166.1-201ENST00000612411 163 ntBASIC-0.95□□□□□ -2.56
BRCA1P38398 Y_RNA.489-201ENST00000384410 101 ntBASIC-0.95□□□□□ -2.56
BRCA1P38398 RNU7-85P-201ENST00000458851 63 ntBASIC-0.95□□□□□ -2.56
BRCA1P38398 RNU4-32P-201ENST00000363404 141 ntBASIC-0.96□□□□□ -2.56
BRCA1P38398 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.96□□□□□ -2.56
BRCA1P38398 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.96□□□□□ -2.56
BRCA1P38398 RNU6-10P-201ENST00000384036 107 ntBASIC-0.96□□□□□ -2.56
BRCA1P38398 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.96□□□□□ -2.56
BRCA1P38398 AL118496.2-201ENST00000448300 230 ntBASIC-0.96□□□□□ -2.56
BRCA1P38398 RNU7-120P-201ENST00000459334 63 ntBASIC-0.96□□□□□ -2.56
BRCA1P38398 MIR5704-201ENST00000584029 77 ntBASIC-0.96□□□□□ -2.56
BRCA1P38398 SNORA63.2-201ENST00000362603 126 ntBASIC-0.97□□□□□ -2.56
BRCA1P38398 RNU6-132P-201ENST00000383863 107 ntBASIC-0.97□□□□□ -2.56
BRCA1P38398 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.97□□□□□ -2.56
BRCA1P38398 MIR517B-201ENST00000385102 67 ntBASIC-0.97□□□□□ -2.56
BRCA1P38398 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.97□□□□□ -2.56
BRCA1P38398 AP001328.1-201ENST00000528550 176 ntBASIC-0.97□□□□□ -2.56
BRCA1P38398 RNU6-379P-201ENST00000363813 104 ntBASIC-0.97□□□□□ -2.57
BRCA1P38398 RNU6-574P-201ENST00000384265 107 ntBASIC-0.97□□□□□ -2.57
BRCA1P38398 SCARNA17-201ENST00000516183 144 ntBASIC-0.97□□□□□ -2.57
BRCA1P38398 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.98□□□□□ -2.57
BRCA1P38398 RNU6-196P-201ENST00000384315 107 ntBASIC-0.98□□□□□ -2.57
BRCA1P38398 MIR548U-201ENST00000390728 81 ntBASIC-0.98□□□□□ -2.57
BRCA1P38398 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.98□□□□□ -2.57
BRCA1P38398 MIR3613-201ENST00000579844 87 ntBASIC-0.98□□□□□ -2.57
BRCA1P38398 AL353621.2-201ENST00000605340 133 ntBASIC-0.98□□□□□ -2.57
BRCA1P38398 U7.2-201ENST00000607576 63 ntBASIC-0.98□□□□□ -2.57
BRCA1P38398 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.99□□□□□ -2.57
BRCA1P38398 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.99□□□□□ -2.57
BRCA1P38398 RNU6-781P-201ENST00000516377 101 ntBASIC-0.99□□□□□ -2.57
BRCA1P38398 SNORD45B-201ENST00000364617 72 ntBASIC-1□□□□□ -2.57
BRCA1P38398 RNU6-80P-201ENST00000384195 107 ntBASIC-1□□□□□ -2.57
BRCA1P38398 RNA5SP192-201ENST00000364404 120 ntBASIC-1.01□□□□□ -2.57
BRCA1P38398 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.01□□□□□ -2.57
BRCA1P38398 RNU6-816P-201ENST00000390914 107 ntBASIC-1.01□□□□□ -2.57
BRCA1P38398 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.01□□□□□ -2.57
BRCA1P38398 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.01□□□□□ -2.57
BRCA1P38398 CYP3A54P-201ENST00000566950 75 ntBASIC-1.01□□□□□ -2.57
BRCA1P38398 MIR3165-201ENST00000579874 75 ntBASIC-1.01□□□□□ -2.57
BRCA1P38398 SNORD4B-201ENST00000459083 72 ntBASIC-1.01□□□□□ -2.57
BRCA1P38398 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.01□□□□□ -2.57
BRCA1P38398 AC068339.1-201ENST00000526965 141 ntBASIC-1.01□□□□□ -2.57
BRCA1P38398 MIR4679-2-201ENST00000578358 77 ntBASIC-1.01□□□□□ -2.57
BRCA1P38398 MIR6509-201ENST00000614603 85 ntBASIC-1.01□□□□□ -2.57
BRCA1P38398 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.02□□□□□ -2.57
BRCA1P38398 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.02□□□□□ -2.57
BRCA1P38398 MIR587-201ENST00000384845 96 ntBASIC-1.02□□□□□ -2.57
BRCA1P38398 RNU6-62P-201ENST00000516526 102 ntBASIC-1.02□□□□□ -2.57
BRCA1P38398 SNORD115-23-201ENST00000364461 82 ntBASIC-1.03□□□□□ -2.57
BRCA1P38398 SNORD114-3-201ENST00000364969 75 ntBASIC-1.03□□□□□ -2.57
BRCA1P38398 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.03□□□□□ -2.57
BRCA1P38398 MIR582-201ENST00000365731 98 ntBASIC-1.03□□□□□ -2.57
BRCA1P38398 SNORD75.2-201ENST00000408784 58 ntBASIC-1.03□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 272.7 ms