Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 RNU6-675P-201ENST00000384236 104 ntBASIC0.36□□□□□ -2.35
SHC1P29353 Y_RNA.491-201ENST00000384417 107 ntBASIC0.36□□□□□ -2.35
SHC1P29353 AC093423.1-201ENST00000440817 142 ntBASIC0.36□□□□□ -2.35
SHC1P29353 SNORA70.25-201ENST00000612741 95 ntBASIC0.36□□□□□ -2.35
SHC1P29353 MIR6755-201ENST00000619993 66 ntBASIC0.36□□□□□ -2.35
SHC1P29353 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.36□□□□□ -2.35
SHC1P29353 RNU6-509P-201ENST00000363519 107 ntBASIC0.35□□□□□ -2.35
SHC1P29353 RNU1-141P-201ENST00000364623 158 ntBASIC0.35□□□□□ -2.35
SHC1P29353 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
SHC1P29353 RNA5SP484-201ENST00000458857 111 ntBASIC0.35□□□□□ -2.35
SHC1P29353 RNU6-1232P-201ENST00000516299 86 ntBASIC0.35□□□□□ -2.35
SHC1P29353 RNA5SP480-201ENST00000516840 109 ntBASIC0.35□□□□□ -2.35
SHC1P29353 MIR3140-201ENST00000583685 90 ntBASIC0.35□□□□□ -2.35
SHC1P29353 MIR103A1-201ENST00000362165 78 ntBASIC0.34□□□□□ -2.36
SHC1P29353 SNORD114-26-201ENST00000363543 72 ntBASIC0.34□□□□□ -2.36
SHC1P29353 MIR519C-201ENST00000385053 87 ntBASIC0.34□□□□□ -2.36
SHC1P29353 MIR451A-201ENST00000385059 72 ntBASIC0.34□□□□□ -2.36
SHC1P29353 MIR548U-201ENST00000390728 81 ntBASIC0.34□□□□□ -2.36
SHC1P29353 MIR1236-201ENST00000408340 102 ntBASIC0.34□□□□□ -2.36
SHC1P29353 RNU6-935P-201ENST00000410371 100 ntBASIC0.34□□□□□ -2.36
SHC1P29353 RNU2-59P-201ENST00000410482 191 ntBASIC0.34□□□□□ -2.36
SHC1P29353 SNORD71-201ENST00000411292 86 ntBASIC0.34□□□□□ -2.36
SHC1P29353 AC243829.6-201ENST00000612652 106 ntBASIC0.34□□□□□ -2.36
SHC1P29353 RNU6-1051P-201ENST00000365471 102 ntBASIC0.33□□□□□ -2.36
SHC1P29353 Y_RNA.423-201ENST00000384057 113 ntBASIC0.33□□□□□ -2.36
SHC1P29353 MIR4796-201ENST00000580742 81 ntBASIC0.33□□□□□ -2.36
SHC1P29353 MIR548BB-201ENST00000626714 66 ntBASIC0.33□□□□□ -2.36
SHC1P29353 MIRLET7D-201ENST00000362263 87 ntBASIC0.32□□□□□ -2.36
SHC1P29353 Y_RNA.73-201ENST00000362910 113 ntBASIC0.32□□□□□ -2.36
SHC1P29353 VTRNA1-3-201ENST00000365645 89 ntBASIC0.32□□□□□ -2.36
SHC1P29353 Y_RNA.558-201ENST00000384685 113 ntBASIC0.32□□□□□ -2.36
SHC1P29353 snoU13.17-201ENST00000458802 104 ntBASIC0.32□□□□□ -2.36
SHC1P29353 RNU7-74P-201ENST00000459104 62 ntBASIC0.32□□□□□ -2.36
SHC1P29353 FGF7P7-201ENST00000514120 227 ntBASIC0.32□□□□□ -2.36
SHC1P29353 RNU6-762P-201ENST00000517107 102 ntBASIC0.32□□□□□ -2.36
SHC1P29353 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.32□□□□□ -2.36
SHC1P29353 NAMPTP3-201ENST00000569273 224 ntBASIC0.32□□□□□ -2.36
SHC1P29353 AC010487.4-201ENST00000637027 61 ntBASIC0.32□□□□□ -2.36
SHC1P29353 RNY1P1-201ENST00000364372 112 ntBASIC0.31□□□□□ -2.36
SHC1P29353 MT-TY-201ENST00000387409 66 ntBASIC0.31□□□□□ -2.36
SHC1P29353 Y_RNA.611-201ENST00000410682 108 ntBASIC0.31□□□□□ -2.36
SHC1P29353 RNU6-863P-201ENST00000515989 104 ntBASIC0.31□□□□□ -2.36
SHC1P29353 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.31□□□□□ -2.36
SHC1P29353 RNU6-1057P-201ENST00000517162 102 ntBASIC0.31□□□□□ -2.36
SHC1P29353 IGLL4P-201ENST00000614590 133 ntBASIC0.31□□□□□ -2.36
SHC1P29353 MIR494-201ENST00000349529 81 ntBASIC0.3□□□□□ -2.36
SHC1P29353 AC090625.1-201ENST00000357130 210 ntBASIC0.3□□□□□ -2.36
SHC1P29353 SNORA63.2-201ENST00000362603 126 ntBASIC0.3□□□□□ -2.36
SHC1P29353 SNORD73B-201ENST00000364394 72 ntBASIC0.3□□□□□ -2.36
SHC1P29353 SNORA24B-201ENST00000384176 131 ntBASIC0.3□□□□□ -2.36
SHC1P29353 SNORA25.13-201ENST00000516395 103 ntBASIC0.3□□□□□ -2.36
SHC1P29353 RNU5B-6P-201ENST00000516765 68 ntBASIC0.3□□□□□ -2.36
SHC1P29353 MIR4460-201ENST00000577862 86 ntBASIC0.3□□□□□ -2.36
SHC1P29353 MIR548O2-201ENST00000616090 70 ntBASIC0.3□□□□□ -2.36
SHC1P29353 AC073869.9-201ENST00000641610 120 ntBASIC0.3□□□□□ -2.36
SHC1P29353 SNORA2A-201ENST00000383885 135 ntBASIC0.29□□□□□ -2.36
SHC1P29353 MIR450A2-201ENST00000385022 100 ntBASIC0.29□□□□□ -2.36
SHC1P29353 U3.27-201ENST00000391237 200 ntBASIC0.29□□□□□ -2.36
SHC1P29353 SNORD110-201ENST00000408189 75 ntBASIC0.29□□□□□ -2.36
SHC1P29353 HMGN2P22-201ENST00000427588 175 ntBASIC0.29□□□□□ -2.36
SHC1P29353 AC093729.1-201ENST00000513074 128 ntBASIC0.29□□□□□ -2.36
SHC1P29353 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.29□□□□□ -2.36
SHC1P29353 AC062037.1-201ENST00000605302 128 ntBASIC0.29□□□□□ -2.36
SHC1P29353 MIR4679-1-201ENST00000637619 75 ntBASIC0.29□□□□□ -2.36
SHC1P29353 RNU6-815P-201ENST00000384080 113 ntBASIC0.28□□□□□ -2.36
SHC1P29353 MIR193B-201ENST00000384907 83 ntBASIC0.28□□□□□ -2.36
SHC1P29353 AC006210.1-201ENST00000424882 111 ntBASIC0.28□□□□□ -2.36
SHC1P29353 AC140658.3-201ENST00000567603 271 ntBASIC0.28□□□□□ -2.36
SHC1P29353 YWHAEP2-201ENST00000580066 112 ntBASIC0.28□□□□□ -2.36
SHC1P29353 AC006254.2-201ENST00000603259 279 ntBASIC0.28□□□□□ -2.36
SHC1P29353 AC069503.3-201ENST00000618674 145 ntBASIC0.28□□□□□ -2.36
SHC1P29353 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.28□□□□□ -2.37
SHC1P29353 RNU6-979P-201ENST00000383896 107 ntBASIC0.27□□□□□ -2.37
SHC1P29353 RNU6V-201ENST00000384105 107 ntBASIC0.27□□□□□ -2.37
SHC1P29353 AC022137.1-201ENST00000483735 151 ntBASIC0.27□□□□□ -2.37
SHC1P29353 MIR5706-201ENST00000579841 80 ntBASIC0.27□□□□□ -2.37
SHC1P29353 AC006160.2-201ENST00000637708 154 ntBASIC0.27□□□□□ -2.37
SHC1P29353 RNU6-624P-201ENST00000363411 107 ntBASIC0.26□□□□□ -2.37
SHC1P29353 Y_RNA.205-201ENST00000364128 113 ntBASIC0.26□□□□□ -2.37
SHC1P29353 RNU6-54P-201ENST00000365563 107 ntBASIC0.26□□□□□ -2.37
SHC1P29353 Y_RNA.388-201ENST00000383919 113 ntBASIC0.26□□□□□ -2.37
SHC1P29353 MIR760-201ENST00000390220 80 ntBASIC0.26□□□□□ -2.37
SHC1P29353 AC108740.1-201ENST00000498629 225 ntBASIC0.26□□□□□ -2.37
SHC1P29353 RNU6-848P-201ENST00000515948 107 ntBASIC0.26□□□□□ -2.37
SHC1P29353 RNU6-617P-201ENST00000516147 107 ntBASIC0.26□□□□□ -2.37
SHC1P29353 RNU6-473P-201ENST00000516164 107 ntBASIC0.26□□□□□ -2.37
SHC1P29353 RNU6-1049P-201ENST00000516414 107 ntBASIC0.26□□□□□ -2.37
SHC1P29353 MIR5588-201ENST00000581890 63 ntBASIC0.26□□□□□ -2.37
SHC1P29353 MIR499B-201ENST00000636498 73 ntBASIC0.26□□□□□ -2.37
SHC1P29353 SNORD115-37-201ENST00000363768 82 ntBASIC0.25□□□□□ -2.37
SHC1P29353 Y_RNA.258-201ENST00000364613 105 ntBASIC0.25□□□□□ -2.37
SHC1P29353 RNY4P3-201ENST00000365254 95 ntBASIC0.25□□□□□ -2.37
SHC1P29353 MIR7-2-201ENST00000384970 110 ntBASIC0.25□□□□□ -2.37
SHC1P29353 MIR216B-201ENST00000390186 82 ntBASIC0.25□□□□□ -2.37
SHC1P29353 MIR501-201ENST00000390204 84 ntBASIC0.25□□□□□ -2.37
SHC1P29353 RNU6-592P-201ENST00000411333 103 ntBASIC0.25□□□□□ -2.37
SHC1P29353 RNA5SP134-201ENST00000516492 96 ntBASIC0.25□□□□□ -2.37
SHC1P29353 MIR1273G-201ENST00000577677 100 ntBASIC0.25□□□□□ -2.37
SHC1P29353 MIR548AE1-201ENST00000583292 70 ntBASIC0.25□□□□□ -2.37
SHC1P29353 MIR6779-201ENST00000617283 64 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 185.1 ms