Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 MT-TY-201ENST00000387409 66 ntBASIC0.23□□□□□ -2.37
HLA-DOBP13765 RNU7-129P-201ENST00000516128 62 ntBASIC0.23□□□□□ -2.37
HLA-DOBP13765 MIR6515-201ENST00000619843 57 ntBASIC0.23□□□□□ -2.37
HLA-DOBP13765 MIR4315-1-201ENST00000636800 73 ntBASIC0.23□□□□□ -2.37
HLA-DOBP13765 MIR4315-2-201ENST00000640925 73 ntBASIC0.23□□□□□ -2.37
HLA-DOBP13765 RNU4-32P-201ENST00000363404 141 ntBASIC0.22□□□□□ -2.37
HLA-DOBP13765 MIR1236-201ENST00000408340 102 ntBASIC0.22□□□□□ -2.37
HLA-DOBP13765 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.21□□□□□ -2.38
HLA-DOBP13765 Y_RNA.125-201ENST00000363371 111 ntBASIC0.21□□□□□ -2.38
HLA-DOBP13765 SNORD116-22-201ENST00000384430 92 ntBASIC0.21□□□□□ -2.38
HLA-DOBP13765 MIR501-201ENST00000390204 84 ntBASIC0.21□□□□□ -2.38
HLA-DOBP13765 RNU6-1232P-201ENST00000516299 86 ntBASIC0.21□□□□□ -2.38
HLA-DOBP13765 Y_RNA.694-201ENST00000516677 117 ntBASIC0.21□□□□□ -2.38
HLA-DOBP13765 YWHAEP2-201ENST00000580066 112 ntBASIC0.21□□□□□ -2.38
HLA-DOBP13765 MIR548AD-201ENST00000584780 82 ntBASIC0.21□□□□□ -2.38
HLA-DOBP13765 MIR548O2-201ENST00000616090 70 ntBASIC0.21□□□□□ -2.38
HLA-DOBP13765 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
HLA-DOBP13765 RNY4P3-201ENST00000365254 95 ntBASIC0.2□□□□□ -2.38
HLA-DOBP13765 RNA5SP292-201ENST00000390974 118 ntBASIC0.2□□□□□ -2.38
HLA-DOBP13765 HMGN2P22-201ENST00000427588 175 ntBASIC0.2□□□□□ -2.38
HLA-DOBP13765 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.2□□□□□ -2.38
HLA-DOBP13765 SNORA25.13-201ENST00000516395 103 ntBASIC0.2□□□□□ -2.38
HLA-DOBP13765 SNORA18.5-201ENST00000516616 101 ntBASIC0.2□□□□□ -2.38
HLA-DOBP13765 MIR4668-201ENST00000582284 70 ntBASIC0.2□□□□□ -2.38
HLA-DOBP13765 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.2□□□□□ -2.38
HLA-DOBP13765 SNORA63.2-201ENST00000362603 126 ntBASIC0.19□□□□□ -2.38
HLA-DOBP13765 MTATP6P29-201ENST00000415057 132 ntBASIC0.19□□□□□ -2.38
HLA-DOBP13765 MIR4677-201ENST00000584153 80 ntBASIC0.19□□□□□ -2.38
HLA-DOBP13765 RNU6-633P-201ENST00000362612 103 ntBASIC0.18□□□□□ -2.38
HLA-DOBP13765 Y_RNA.355-201ENST00000365462 98 ntBASIC0.18□□□□□ -2.38
HLA-DOBP13765 RNU6-652P-201ENST00000365488 107 ntBASIC0.18□□□□□ -2.38
HLA-DOBP13765 RNY1P4-201ENST00000384595 115 ntBASIC0.18□□□□□ -2.38
HLA-DOBP13765 RNU6-127P-201ENST00000390897 107 ntBASIC0.18□□□□□ -2.38
HLA-DOBP13765 FGF7P7-201ENST00000514120 227 ntBASIC0.18□□□□□ -2.38
HLA-DOBP13765 MIR5093-201ENST00000583199 100 ntBASIC0.18□□□□□ -2.38
HLA-DOBP13765 MIR499B-201ENST00000636498 73 ntBASIC0.18□□□□□ -2.38
HLA-DOBP13765 RNU6-1051P-201ENST00000365471 102 ntBASIC0.17□□□□□ -2.38
HLA-DOBP13765 RNY1P7-201ENST00000384743 110 ntBASIC0.17□□□□□ -2.38
HLA-DOBP13765 MIR519C-201ENST00000385053 87 ntBASIC0.17□□□□□ -2.38
HLA-DOBP13765 Y_RNA.620-201ENST00000411009 88 ntBASIC0.17□□□□□ -2.38
HLA-DOBP13765 RNU6-782P-201ENST00000516852 104 ntBASIC0.17□□□□□ -2.38
HLA-DOBP13765 RNU6-844P-201ENST00000517175 102 ntBASIC0.17□□□□□ -2.38
HLA-DOBP13765 SNORA42.1-201ENST00000363515 137 ntBASIC0.16□□□□□ -2.38
HLA-DOBP13765 RNU6-1131P-201ENST00000364955 107 ntBASIC0.16□□□□□ -2.38
HLA-DOBP13765 Y_RNA.407-201ENST00000383986 113 ntBASIC0.16□□□□□ -2.38
HLA-DOBP13765 RNU6V-201ENST00000384105 107 ntBASIC0.16□□□□□ -2.38
HLA-DOBP13765 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.16□□□□□ -2.38
HLA-DOBP13765 RNU5B-6P-201ENST00000516765 68 ntBASIC0.16□□□□□ -2.38
HLA-DOBP13765 MIR4796-201ENST00000580742 81 ntBASIC0.16□□□□□ -2.38
HLA-DOBP13765 MIR4473-201ENST00000583731 91 ntBASIC0.16□□□□□ -2.38
HLA-DOBP13765 RNU5F-1-201ENST00000362507 117 ntBASIC0.15□□□□□ -2.39
HLA-DOBP13765 Y_RNA.558-201ENST00000384685 113 ntBASIC0.15□□□□□ -2.39
HLA-DOBP13765 MIR598-201ENST00000384868 97 ntBASIC0.15□□□□□ -2.39
HLA-DOBP13765 RNY4P30-201ENST00000410216 95 ntBASIC0.15□□□□□ -2.39
HLA-DOBP13765 RNU6-1052P-201ENST00000411398 104 ntBASIC0.15□□□□□ -2.39
HLA-DOBP13765 RNU6-719P-201ENST00000516671 104 ntBASIC0.15□□□□□ -2.39
HLA-DOBP13765 uc_338.10-201ENST00000621872 182 ntBASIC0.15□□□□□ -2.39
HLA-DOBP13765 SNORD115-27-201ENST00000364430 82 ntBASIC0.14□□□□□ -2.39
HLA-DOBP13765 RNU6-219P-201ENST00000364728 107 ntBASIC0.14□□□□□ -2.39
HLA-DOBP13765 RNU6-49P-201ENST00000384256 107 ntBASIC0.14□□□□□ -2.39
HLA-DOBP13765 MIR892B-201ENST00000401279 77 ntBASIC0.14□□□□□ -2.39
HLA-DOBP13765 MIR3140-201ENST00000583685 90 ntBASIC0.14□□□□□ -2.39
HLA-DOBP13765 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.14□□□□□ -2.39
HLA-DOBP13765 SNORD114-23-201ENST00000363536 72 ntBASIC0.13□□□□□ -2.39
HLA-DOBP13765 SNORD115-37-201ENST00000363768 82 ntBASIC0.13□□□□□ -2.39
HLA-DOBP13765 RNU6-1134P-201ENST00000365156 101 ntBASIC0.13□□□□□ -2.39
HLA-DOBP13765 Y_RNA.437-201ENST00000384113 113 ntBASIC0.13□□□□□ -2.39
HLA-DOBP13765 SNORA24B-201ENST00000384176 131 ntBASIC0.13□□□□□ -2.39
HLA-DOBP13765 MIR610-201ENST00000385139 96 ntBASIC0.13□□□□□ -2.39
HLA-DOBP13765 MIR516B1-201ENST00000385211 90 ntBASIC0.13□□□□□ -2.39
HLA-DOBP13765 SNORA75.1-201ENST00000391130 148 ntBASIC0.13□□□□□ -2.39
HLA-DOBP13765 RNU6-402P-201ENST00000410678 103 ntBASIC0.13□□□□□ -2.39
HLA-DOBP13765 snoU13.18-201ENST00000459483 104 ntBASIC0.13□□□□□ -2.39
HLA-DOBP13765 MIR4743-201ENST00000584576 69 ntBASIC0.13□□□□□ -2.39
HLA-DOBP13765 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.13□□□□□ -2.39
HLA-DOBP13765 PVT1_3.1-201ENST00000620853 95 ntBASIC0.13□□□□□ -2.39
HLA-DOBP13765 MIR643-201ENST00000385267 97 ntBASIC0.12□□□□□ -2.39
HLA-DOBP13765 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
HLA-DOBP13765 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
HLA-DOBP13765 AC084368.1-201ENST00000620935 65 ntBASIC0.12□□□□□ -2.39
HLA-DOBP13765 MIR924-201ENST00000638017 53 ntBASIC0.12□□□□□ -2.39
HLA-DOBP13765 SNORD114-4-201ENST00000363962 75 ntBASIC0.11□□□□□ -2.39
HLA-DOBP13765 RNU6-54P-201ENST00000365563 107 ntBASIC0.11□□□□□ -2.39
HLA-DOBP13765 RNU6-675P-201ENST00000384236 104 ntBASIC0.11□□□□□ -2.39
HLA-DOBP13765 RNU6-1177P-201ENST00000391058 104 ntBASIC0.11□□□□□ -2.39
HLA-DOBP13765 SNORD90-201ENST00000391145 111 ntBASIC0.11□□□□□ -2.39
HLA-DOBP13765 MIR876-201ENST00000401147 81 ntBASIC0.11□□□□□ -2.39
HLA-DOBP13765 RNU7-153P-201ENST00000516455 62 ntBASIC0.11□□□□□ -2.39
HLA-DOBP13765 MIR548AE1-201ENST00000583292 70 ntBASIC0.11□□□□□ -2.39
HLA-DOBP13765 MIR3925-201ENST00000584674 77 ntBASIC0.11□□□□□ -2.39
HLA-DOBP13765 AC104408.1-201ENST00000605241 170 ntBASIC0.11□□□□□ -2.39
HLA-DOBP13765 RNU6-161P-201ENST00000363051 106 ntBASIC0.1□□□□□ -2.39
HLA-DOBP13765 RNA5SP214-201ENST00000363378 118 ntBASIC0.1□□□□□ -2.39
HLA-DOBP13765 RNU6-497P-201ENST00000365316 104 ntBASIC0.1□□□□□ -2.39
HLA-DOBP13765 RNU6-154P-201ENST00000384306 106 ntBASIC0.1□□□□□ -2.39
HLA-DOBP13765 Y_RNA.660-201ENST00000516002 120 ntBASIC0.1□□□□□ -2.39
HLA-DOBP13765 Y_RNA.17-201ENST00000362433 111 ntBASIC0.09□□□□□ -2.4
HLA-DOBP13765 RNA5SP325-201ENST00000363756 130 ntBASIC0.09□□□□□ -2.4
HLA-DOBP13765 SNORD114-9-201ENST00000364370 72 ntBASIC0.09□□□□□ -2.4
HLA-DOBP13765 SNORD114-29-201ENST00000364819 70 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 227.6 ms