Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 MIR4636-201ENST00000582271 80 ntBASIC-0.33□□□□□ -2.46
RAB40ALP0C0E4 RNU4-36P-201ENST00000364294 144 ntBASIC-0.34□□□□□ -2.46
RAB40ALP0C0E4 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.34□□□□□ -2.46
RAB40ALP0C0E4 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.34□□□□□ -2.46
RAB40ALP0C0E4 RNU6-412P-201ENST00000516434 106 ntBASIC-0.34□□□□□ -2.46
RAB40ALP0C0E4 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.34□□□□□ -2.46
RAB40ALP0C0E4 MIR4536-1-201ENST00000583537 88 ntBASIC-0.34□□□□□ -2.46
RAB40ALP0C0E4 SNORD49B-201ENST00000365172 72 ntBASIC-0.35□□□□□ -2.47
RAB40ALP0C0E4 SNORD116-21-201ENST00000384507 92 ntBASIC-0.35□□□□□ -2.47
RAB40ALP0C0E4 MIR451A-201ENST00000385059 72 ntBASIC-0.35□□□□□ -2.47
RAB40ALP0C0E4 RNA5SP300-201ENST00000391197 107 ntBASIC-0.35□□□□□ -2.47
RAB40ALP0C0E4 AC096531.1-201ENST00000419107 107 ntBASIC-0.35□□□□□ -2.47
RAB40ALP0C0E4 RNU6-75P-201ENST00000515944 104 ntBASIC-0.35□□□□□ -2.47
RAB40ALP0C0E4 MIR4802-201ENST00000581881 80 ntBASIC-0.35□□□□□ -2.47
RAB40ALP0C0E4 RNA5SP275-201ENST00000363936 118 ntBASIC-0.36□□□□□ -2.47
RAB40ALP0C0E4 RNU6-813P-201ENST00000384691 107 ntBASIC-0.36□□□□□ -2.47
RAB40ALP0C0E4 MIR196A2-201ENST00000385189 110 ntBASIC-0.36□□□□□ -2.47
RAB40ALP0C0E4 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.36□□□□□ -2.47
RAB40ALP0C0E4 MIR4645-201ENST00000583158 77 ntBASIC-0.36□□□□□ -2.47
RAB40ALP0C0E4 AL590491.3-201ENST00000610731 82 ntBASIC-0.36□□□□□ -2.47
RAB40ALP0C0E4 MIR548O2-201ENST00000616090 70 ntBASIC-0.36□□□□□ -2.47
RAB40ALP0C0E4 RNA5SP98-201ENST00000363158 137 ntBASIC-0.37□□□□□ -2.47
RAB40ALP0C0E4 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.37□□□□□ -2.47
RAB40ALP0C0E4 AC244250.2-201ENST00000418731 148 ntBASIC-0.37□□□□□ -2.47
RAB40ALP0C0E4 AC103810.7-201ENST00000607821 91 ntBASIC-0.37□□□□□ -2.47
RAB40ALP0C0E4 MIR20A-201ENST00000362279 71 ntBASIC-0.38□□□□□ -2.47
RAB40ALP0C0E4 SNORD114-11-201ENST00000363738 75 ntBASIC-0.38□□□□□ -2.47
RAB40ALP0C0E4 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.38□□□□□ -2.47
RAB40ALP0C0E4 RNU6-644P-201ENST00000391155 98 ntBASIC-0.38□□□□□ -2.47
RAB40ALP0C0E4 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.38□□□□□ -2.47
RAB40ALP0C0E4 MIR6507-201ENST00000613630 70 ntBASIC-0.38□□□□□ -2.47
RAB40ALP0C0E4 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.39□□□□□ -2.47
RAB40ALP0C0E4 RNA5SP205-201ENST00000364653 136 ntBASIC-0.39□□□□□ -2.47
RAB40ALP0C0E4 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.39□□□□□ -2.47
RAB40ALP0C0E4 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.39□□□□□ -2.47
RAB40ALP0C0E4 RNU6-959P-201ENST00000384671 107 ntBASIC-0.39□□□□□ -2.47
RAB40ALP0C0E4 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.39□□□□□ -2.47
RAB40ALP0C0E4 U3.27-201ENST00000391237 200 ntBASIC-0.39□□□□□ -2.47
RAB40ALP0C0E4 RNU7-85P-201ENST00000458851 63 ntBASIC-0.39□□□□□ -2.47
RAB40ALP0C0E4 SNORD126-201ENST00000459475 77 ntBASIC-0.39□□□□□ -2.47
RAB40ALP0C0E4 RNU6-175P-201ENST00000516896 107 ntBASIC-0.39□□□□□ -2.47
RAB40ALP0C0E4 MIR3666-201ENST00000607845 111 ntBASIC-0.39□□□□□ -2.47
RAB40ALP0C0E4 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.39□□□□□ -2.47
RAB40ALP0C0E4 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.4□□□□□ -2.47
RAB40ALP0C0E4 RNU6-811P-201ENST00000384069 107 ntBASIC-0.4□□□□□ -2.47
RAB40ALP0C0E4 SNORA32.3-201ENST00000384772 121 ntBASIC-0.4□□□□□ -2.47
RAB40ALP0C0E4 MIR652-201ENST00000385278 98 ntBASIC-0.4□□□□□ -2.47
RAB40ALP0C0E4 AC008267.6-201ENST00000441664 139 ntBASIC-0.4□□□□□ -2.47
RAB40ALP0C0E4 SNORD14C-201ENST00000365382 88 ntBASIC-0.41□□□□□ -2.48
RAB40ALP0C0E4 AC244090.1-201ENST00000441884 93 ntBASIC-0.41□□□□□ -2.48
RAB40ALP0C0E4 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.41□□□□□ -2.48
RAB40ALP0C0E4 RNU6-795P-201ENST00000516323 103 ntBASIC-0.41□□□□□ -2.48
RAB40ALP0C0E4 AP001180.6-201ENST00000584918 159 ntBASIC-0.41□□□□□ -2.48
RAB40ALP0C0E4 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.41□□□□□ -2.48
RAB40ALP0C0E4 SNORD114-28-201ENST00000363610 72 ntBASIC-0.42□□□□□ -2.48
RAB40ALP0C0E4 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.42□□□□□ -2.48
RAB40ALP0C0E4 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.42□□□□□ -2.48
RAB40ALP0C0E4 MIR548M-201ENST00000408260 86 ntBASIC-0.42□□□□□ -2.48
RAB40ALP0C0E4 MIR1265-201ENST00000408444 86 ntBASIC-0.42□□□□□ -2.48
RAB40ALP0C0E4 RNA5SP476-201ENST00000516613 103 ntBASIC-0.42□□□□□ -2.48
RAB40ALP0C0E4 MIR4263-201ENST00000584745 83 ntBASIC-0.42□□□□□ -2.48
RAB40ALP0C0E4 MIR8064-201ENST00000612863 90 ntBASIC-0.42□□□□□ -2.48
RAB40ALP0C0E4 AL391099.1-201ENST00000624635 187 ntBASIC-0.42□□□□□ -2.48
RAB40ALP0C0E4 MIR548U-201ENST00000390728 81 ntBASIC-0.43□□□□□ -2.48
RAB40ALP0C0E4 Z95118.1-201ENST00000421372 247 ntBASIC-0.43□□□□□ -2.48
RAB40ALP0C0E4 MIR4777-201ENST00000583710 86 ntBASIC-0.43□□□□□ -2.48
RAB40ALP0C0E4 MIR548Z-201ENST00000584743 97 ntBASIC-0.43□□□□□ -2.48
RAB40ALP0C0E4 AC012531.4-201ENST00000616509 177 ntBASIC-0.43□□□□□ -2.48
RAB40ALP0C0E4 uc_338.36-201ENST00000622331 158 ntBASIC-0.43□□□□□ -2.48
RAB40ALP0C0E4 RNU6-54P-201ENST00000365563 107 ntBASIC-0.44□□□□□ -2.48
RAB40ALP0C0E4 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.44□□□□□ -2.48
RAB40ALP0C0E4 FGF7P7-201ENST00000514120 227 ntBASIC-0.44□□□□□ -2.48
RAB40ALP0C0E4 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.44□□□□□ -2.48
RAB40ALP0C0E4 RNU6-762P-201ENST00000517107 102 ntBASIC-0.44□□□□□ -2.48
RAB40ALP0C0E4 MIR4493-201ENST00000584016 73 ntBASIC-0.44□□□□□ -2.48
RAB40ALP0C0E4 MIR4436A-201ENST00000585278 85 ntBASIC-0.44□□□□□ -2.48
RAB40ALP0C0E4 MIR6086-201ENST00000638065 55 ntBASIC-0.44□□□□□ -2.48
RAB40ALP0C0E4 RNU6-132P-201ENST00000383863 107 ntBASIC-0.45□□□□□ -2.48
RAB40ALP0C0E4 RNU6-284P-201ENST00000411105 106 ntBASIC-0.45□□□□□ -2.48
RAB40ALP0C0E4 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.45□□□□□ -2.48
RAB40ALP0C0E4 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.45□□□□□ -2.48
RAB40ALP0C0E4 SCARNA23-201ENST00000516060 130 ntBASIC-0.45□□□□□ -2.48
RAB40ALP0C0E4 RNU6-719P-201ENST00000516671 104 ntBASIC-0.45□□□□□ -2.48
RAB40ALP0C0E4 MIR4432-201ENST00000581823 84 ntBASIC-0.45□□□□□ -2.48
RAB40ALP0C0E4 MIR4788-201ENST00000639104 80 ntBASIC-0.45□□□□□ -2.48
RAB40ALP0C0E4 RNU6-81P-201ENST00000365608 104 ntBASIC-0.46□□□□□ -2.48
RAB40ALP0C0E4 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.46□□□□□ -2.48
RAB40ALP0C0E4 RNU6-519P-201ENST00000410590 108 ntBASIC-0.46□□□□□ -2.48
RAB40ALP0C0E4 SNORA19.1-201ENST00000410656 129 ntBASIC-0.46□□□□□ -2.48
RAB40ALP0C0E4 RPS29P8-201ENST00000445109 171 ntBASIC-0.46□□□□□ -2.48
RAB40ALP0C0E4 RNU6-904P-201ENST00000516206 101 ntBASIC-0.46□□□□□ -2.48
RAB40ALP0C0E4 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.46□□□□□ -2.48
RAB40ALP0C0E4 SNORD114-4-201ENST00000363962 75 ntBASIC-0.47□□□□□ -2.48
RAB40ALP0C0E4 RNU6-476P-201ENST00000384726 107 ntBASIC-0.47□□□□□ -2.48
RAB40ALP0C0E4 SNORD4B-201ENST00000459083 72 ntBASIC-0.47□□□□□ -2.48
RAB40ALP0C0E4 RNA5SP169-201ENST00000517268 117 ntBASIC-0.47□□□□□ -2.48
RAB40ALP0C0E4 MIR548AZ-201ENST00000616567 95 ntBASIC-0.47□□□□□ -2.48
RAB40ALP0C0E4 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.48□□□□□ -2.49
RAB40ALP0C0E4 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.48□□□□□ -2.49
RAB40ALP0C0E4 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.48□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 865.5 ms