Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.27□□□□□ -2.45
MRPL3P09001 AL365222.1-201ENST00000614661 98 ntBASIC-0.27□□□□□ -2.45
MRPL3P09001 RNA5SP98-201ENST00000363158 137 ntBASIC-0.28□□□□□ -2.45
MRPL3P09001 RNU6-81P-201ENST00000365608 104 ntBASIC-0.28□□□□□ -2.45
MRPL3P09001 MIR582-201ENST00000365731 98 ntBASIC-0.28□□□□□ -2.45
MRPL3P09001 MIR1197-201ENST00000408818 88 ntBASIC-0.28□□□□□ -2.45
MRPL3P09001 RNU6-904P-201ENST00000516206 101 ntBASIC-0.28□□□□□ -2.45
MRPL3P09001 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.28□□□□□ -2.45
MRPL3P09001 MIR3140-201ENST00000583685 90 ntBASIC-0.28□□□□□ -2.45
MRPL3P09001 AC145423.2-201ENST00000610631 239 ntBASIC-0.28□□□□□ -2.45
MRPL3P09001 MIR20A-201ENST00000362279 71 ntBASIC-0.29□□□□□ -2.46
MRPL3P09001 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.29□□□□□ -2.46
MRPL3P09001 RNA5SP300-201ENST00000391197 107 ntBASIC-0.29□□□□□ -2.46
MRPL3P09001 AC097510.1-201ENST00000510945 133 ntBASIC-0.29□□□□□ -2.46
MRPL3P09001 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.29□□□□□ -2.46
MRPL3P09001 RNU6-537P-201ENST00000517277 103 ntBASIC-0.29□□□□□ -2.46
MRPL3P09001 MIR3064-201ENST00000581130 66 ntBASIC-0.29□□□□□ -2.46
MRPL3P09001 MIR3666-201ENST00000607845 111 ntBASIC-0.29□□□□□ -2.46
MRPL3P09001 AL590491.3-201ENST00000610731 82 ntBASIC-0.29□□□□□ -2.46
MRPL3P09001 RNU4-36P-201ENST00000364294 144 ntBASIC-0.3□□□□□ -2.46
MRPL3P09001 MIR216B-201ENST00000390186 82 ntBASIC-0.3□□□□□ -2.46
MRPL3P09001 RNA5SP292-201ENST00000390974 118 ntBASIC-0.3□□□□□ -2.46
MRPL3P09001 SNORD90-201ENST00000391145 111 ntBASIC-0.3□□□□□ -2.46
MRPL3P09001 U3.27-201ENST00000391237 200 ntBASIC-0.3□□□□□ -2.46
MRPL3P09001 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.3□□□□□ -2.46
MRPL3P09001 AC244090.1-201ENST00000441884 93 ntBASIC-0.3□□□□□ -2.46
MRPL3P09001 FGF7P7-201ENST00000514120 227 ntBASIC-0.3□□□□□ -2.46
MRPL3P09001 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.31□□□□□ -2.46
MRPL3P09001 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.31□□□□□ -2.46
MRPL3P09001 MIR9-2-201ENST00000384838 87 ntBASIC-0.31□□□□□ -2.46
MRPL3P09001 MIR548E-201ENST00000408287 88 ntBASIC-0.31□□□□□ -2.46
MRPL3P09001 AC104996.3-201ENST00000590718 94 ntBASIC-0.31□□□□□ -2.46
MRPL3P09001 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.32□□□□□ -2.46
MRPL3P09001 SNORD58A-201ENST00000383875 65 ntBASIC-0.32□□□□□ -2.46
MRPL3P09001 SNORA24B-201ENST00000384176 131 ntBASIC-0.32□□□□□ -2.46
MRPL3P09001 RNU6-455P-201ENST00000384681 107 ntBASIC-0.32□□□□□ -2.46
MRPL3P09001 MIR590-201ENST00000385008 97 ntBASIC-0.32□□□□□ -2.46
MRPL3P09001 SCARNA23-201ENST00000516060 130 ntBASIC-0.32□□□□□ -2.46
MRPL3P09001 RNU6-412P-201ENST00000516434 106 ntBASIC-0.32□□□□□ -2.46
MRPL3P09001 SNORA63.2-201ENST00000362603 126 ntBASIC-0.33□□□□□ -2.46
MRPL3P09001 RNU6-106P-201ENST00000384405 107 ntBASIC-0.33□□□□□ -2.46
MRPL3P09001 RNU6-476P-201ENST00000384726 107 ntBASIC-0.33□□□□□ -2.46
MRPL3P09001 AC008267.6-201ENST00000441664 139 ntBASIC-0.33□□□□□ -2.46
MRPL3P09001 MIR6129-201ENST00000616087 109 ntBASIC-0.33□□□□□ -2.46
MRPL3P09001 SNORD114-11-201ENST00000363738 75 ntBASIC-0.34□□□□□ -2.46
MRPL3P09001 SNORA19-201ENST00000384737 128 ntBASIC-0.34□□□□□ -2.46
MRPL3P09001 RNU6-554P-201ENST00000410466 106 ntBASIC-0.34□□□□□ -2.46
MRPL3P09001 RNU6-109P-201ENST00000516364 107 ntBASIC-0.34□□□□□ -2.46
MRPL3P09001 RNU6-184P-201ENST00000516514 107 ntBASIC-0.34□□□□□ -2.46
MRPL3P09001 RNA5SP330-201ENST00000517096 96 ntBASIC-0.34□□□□□ -2.46
MRPL3P09001 AP000676.1-201ENST00000533307 52 ntBASIC-0.34□□□□□ -2.46
MRPL3P09001 MIR2909-201ENST00000617113 69 ntBASIC-0.34□□□□□ -2.46
MRPL3P09001 MIR4788-201ENST00000639104 80 ntBASIC-0.34□□□□□ -2.46
MRPL3P09001 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.35□□□□□ -2.47
MRPL3P09001 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.35□□□□□ -2.47
MRPL3P09001 MIR548M-201ENST00000408260 86 ntBASIC-0.35□□□□□ -2.47
MRPL3P09001 RNU6-519P-201ENST00000410590 108 ntBASIC-0.35□□□□□ -2.47
MRPL3P09001 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.35□□□□□ -2.47
MRPL3P09001 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.35□□□□□ -2.47
MRPL3P09001 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.35□□□□□ -2.47
MRPL3P09001 AC026421.1-201ENST00000519101 163 ntBASIC-0.35□□□□□ -2.47
MRPL3P09001 RNU6-495P-201ENST00000362995 107 ntBASIC-0.36□□□□□ -2.47
MRPL3P09001 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.36□□□□□ -2.47
MRPL3P09001 MIR489-201ENST00000384923 84 ntBASIC-0.36□□□□□ -2.47
MRPL3P09001 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.36□□□□□ -2.47
MRPL3P09001 MIR548U-201ENST00000390728 81 ntBASIC-0.36□□□□□ -2.47
MRPL3P09001 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.36□□□□□ -2.47
MRPL3P09001 RNU6-887P-201ENST00000410660 100 ntBASIC-0.36□□□□□ -2.47
MRPL3P09001 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.36□□□□□ -2.47
MRPL3P09001 SNORA18.5-201ENST00000516616 101 ntBASIC-0.36□□□□□ -2.47
MRPL3P09001 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.36□□□□□ -2.47
MRPL3P09001 SNORD115-25-201ENST00000362619 82 ntBASIC-0.37□□□□□ -2.47
MRPL3P09001 RNU6-22P-201ENST00000384355 107 ntBASIC-0.37□□□□□ -2.47
MRPL3P09001 SNORD56B-201ENST00000384713 71 ntBASIC-0.37□□□□□ -2.47
MRPL3P09001 MIR214-201ENST00000385214 110 ntBASIC-0.37□□□□□ -2.47
MRPL3P09001 RNU6-972P-201ENST00000391208 107 ntBASIC-0.37□□□□□ -2.47
MRPL3P09001 RNU7-61P-201ENST00000515897 61 ntBASIC-0.37□□□□□ -2.47
MRPL3P09001 RNU6-589P-201ENST00000516485 107 ntBASIC-0.37□□□□□ -2.47
MRPL3P09001 RNU6-320P-201ENST00000516511 106 ntBASIC-0.37□□□□□ -2.47
MRPL3P09001 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.37□□□□□ -2.47
MRPL3P09001 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.38□□□□□ -2.47
MRPL3P09001 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.38□□□□□ -2.47
MRPL3P09001 RNU6-900P-201ENST00000384498 102 ntBASIC-0.38□□□□□ -2.47
MRPL3P09001 MIR1302-5-201ENST00000408164 150 ntBASIC-0.38□□□□□ -2.47
MRPL3P09001 snoU13.13-201ENST00000458842 104 ntBASIC-0.38□□□□□ -2.47
MRPL3P09001 RNU6-62P-201ENST00000516526 102 ntBASIC-0.38□□□□□ -2.47
MRPL3P09001 MIR3910-1-201ENST00000580936 111 ntBASIC-0.38□□□□□ -2.47
MRPL3P09001 MIR4263-201ENST00000584745 83 ntBASIC-0.38□□□□□ -2.47
MRPL3P09001 RNU6-502P-201ENST00000362419 108 ntBASIC-0.39□□□□□ -2.47
MRPL3P09001 RNU4-32P-201ENST00000363404 141 ntBASIC-0.39□□□□□ -2.47
MRPL3P09001 RNU6-990P-201ENST00000364385 104 ntBASIC-0.39□□□□□ -2.47
MRPL3P09001 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.39□□□□□ -2.47
MRPL3P09001 RNU7-55P-201ENST00000459426 62 ntBASIC-0.39□□□□□ -2.47
MRPL3P09001 SNORA40.17-201ENST00000517256 115 ntBASIC-0.39□□□□□ -2.47
MRPL3P09001 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.4□□□□□ -2.47
MRPL3P09001 SNORD114-4-201ENST00000363962 75 ntBASIC-0.4□□□□□ -2.47
MRPL3P09001 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.4□□□□□ -2.47
MRPL3P09001 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.4□□□□□ -2.47
MRPL3P09001 snoU13.17-201ENST00000458802 104 ntBASIC-0.4□□□□□ -2.47
MRPL3P09001 SNORD126-201ENST00000459475 77 ntBASIC-0.4□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 1055.7 ms