Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC019288.1-201ENST00000557918 224 ntBASIC0.77□□□□□ -2.29
COL2A1P02458 SNORD92-201ENST00000585078 85 ntBASIC0.77□□□□□ -2.29
COL2A1P02458 AC145423.2-201ENST00000610631 239 ntBASIC0.77□□□□□ -2.29
COL2A1P02458 AL136317.1-201ENST00000612653 226 ntBASIC0.77□□□□□ -2.29
COL2A1P02458 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.77□□□□□ -2.29
COL2A1P02458 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
COL2A1P02458 MIRLET7A1-201ENST00000362295 80 ntBASIC0.76□□□□□ -2.29
COL2A1P02458 Y_RNA.12-201ENST00000362393 112 ntBASIC0.76□□□□□ -2.29
COL2A1P02458 RNU6-1094P-201ENST00000362416 104 ntBASIC0.76□□□□□ -2.29
COL2A1P02458 RNU6-208P-201ENST00000362431 107 ntBASIC0.76□□□□□ -2.29
COL2A1P02458 RNU6-1335P-201ENST00000365426 107 ntBASIC0.76□□□□□ -2.29
COL2A1P02458 SNORD101-201ENST00000384027 73 ntBASIC0.76□□□□□ -2.29
COL2A1P02458 RNU6-287P-201ENST00000516230 98 ntBASIC0.76□□□□□ -2.29
COL2A1P02458 Y_RNA.32-201ENST00000362589 110 ntBASIC0.75□□□□□ -2.29
COL2A1P02458 RNU6-686P-201ENST00000364839 107 ntBASIC0.75□□□□□ -2.29
COL2A1P02458 RNU6-1296P-201ENST00000383879 107 ntBASIC0.75□□□□□ -2.29
COL2A1P02458 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.75□□□□□ -2.29
COL2A1P02458 SNORD124-201ENST00000459577 104 ntBASIC0.75□□□□□ -2.29
COL2A1P02458 RNU6-70P-201ENST00000516438 60 ntBASIC0.75□□□□□ -2.29
COL2A1P02458 AC138869.1-201ENST00000568623 124 ntBASIC0.75□□□□□ -2.29
COL2A1P02458 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.75□□□□□ -2.29
COL2A1P02458 RNU6-1260P-201ENST00000362944 107 ntBASIC0.74□□□□□ -2.29
COL2A1P02458 SNORD115-24-201ENST00000363528 82 ntBASIC0.74□□□□□ -2.29
COL2A1P02458 SNORD77.2-201ENST00000391045 68 ntBASIC0.74□□□□□ -2.29
COL2A1P02458 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.73□□□□□ -2.29
COL2A1P02458 RNU6-1187P-201ENST00000364771 110 ntBASIC0.73□□□□□ -2.29
COL2A1P02458 SNORA25-201ENST00000384384 134 ntBASIC0.73□□□□□ -2.29
COL2A1P02458 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.73□□□□□ -2.29
COL2A1P02458 Y_RNA.596-201ENST00000410462 109 ntBASIC0.73□□□□□ -2.29
COL2A1P02458 MIR2113-201ENST00000459007 91 ntBASIC0.73□□□□□ -2.29
COL2A1P02458 RNU7-10P-201ENST00000607194 63 ntBASIC0.73□□□□□ -2.29
COL2A1P02458 uc_338.16-201ENST00000621804 95 ntBASIC0.73□□□□□ -2.29
COL2A1P02458 AC067863.3-201ENST00000624172 122 ntBASIC0.73□□□□□ -2.29
COL2A1P02458 MIR451A-201ENST00000385059 72 ntBASIC0.73□□□□□ -2.29
COL2A1P02458 MIR146A-201ENST00000385201 99 ntBASIC0.73□□□□□ -2.29
COL2A1P02458 RNU7-104P-201ENST00000459398 79 ntBASIC0.73□□□□□ -2.29
COL2A1P02458 RNU6-523P-201ENST00000516304 54 ntBASIC0.73□□□□□ -2.29
COL2A1P02458 RNA5SP285-201ENST00000516619 119 ntBASIC0.73□□□□□ -2.29
COL2A1P02458 RNU6-315P-201ENST00000362666 107 ntBASIC0.72□□□□□ -2.29
COL2A1P02458 AC067940.1-201ENST00000458411 300 ntBASIC0.72□□□□□ -2.29
COL2A1P02458 RPL39P28-201ENST00000465655 155 ntBASIC0.72□□□□□ -2.29
COL2A1P02458 RNU6-765P-201ENST00000516916 99 ntBASIC0.72□□□□□ -2.29
COL2A1P02458 RNU7-161P-201ENST00000517289 62 ntBASIC0.72□□□□□ -2.29
COL2A1P02458 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.72□□□□□ -2.29
COL2A1P02458 RNU6-824P-201ENST00000363724 104 ntBASIC0.71□□□□□ -2.3
COL2A1P02458 RNA5SP117-201ENST00000365294 118 ntBASIC0.71□□□□□ -2.3
COL2A1P02458 MIR203A-201ENST00000384836 110 ntBASIC0.71□□□□□ -2.3
COL2A1P02458 MIR942-201ENST00000401111 86 ntBASIC0.71□□□□□ -2.3
COL2A1P02458 AC139453.2-201ENST00000487255 133 ntBASIC0.71□□□□□ -2.3
COL2A1P02458 YWHAEP2-201ENST00000580066 112 ntBASIC0.71□□□□□ -2.3
COL2A1P02458 MIR548AG2-201ENST00000581228 64 ntBASIC0.71□□□□□ -2.3
COL2A1P02458 YWHAEP3-201ENST00000582767 121 ntBASIC0.71□□□□□ -2.3
COL2A1P02458 AC023932.2-201ENST00000603176 175 ntBASIC0.71□□□□□ -2.3
COL2A1P02458 MIR4773-1-201ENST00000637203 78 ntBASIC0.71□□□□□ -2.3
COL2A1P02458 SNORA8.1-201ENST00000384250 140 ntBASIC0.7□□□□□ -2.3
COL2A1P02458 Y_RNA.545-201ENST00000384652 105 ntBASIC0.7□□□□□ -2.3
COL2A1P02458 MIR1827-201ENST00000408549 66 ntBASIC0.7□□□□□ -2.3
COL2A1P02458 AC097635.1-201ENST00000450678 155 ntBASIC0.7□□□□□ -2.3
COL2A1P02458 RNU6-557P-201ENST00000516842 110 ntBASIC0.7□□□□□ -2.3
COL2A1P02458 RNU6-1015P-201ENST00000517121 99 ntBASIC0.7□□□□□ -2.3
COL2A1P02458 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
COL2A1P02458 AC002350.1-201ENST00000490759 375 ntBASIC0.69□□□□□ -2.3
COL2A1P02458 RNU6-1057P-201ENST00000517162 102 ntBASIC0.69□□□□□ -2.3
COL2A1P02458 NAMPTP3-201ENST00000569273 224 ntBASIC0.69□□□□□ -2.3
COL2A1P02458 MIR3920-201ENST00000581751 86 ntBASIC0.69□□□□□ -2.3
COL2A1P02458 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
COL2A1P02458 RNU6-340P-201ENST00000364005 107 ntBASIC0.68□□□□□ -2.3
COL2A1P02458 MIR519A1-201ENST00000385257 85 ntBASIC0.68□□□□□ -2.3
COL2A1P02458 SNORD105-201ENST00000386910 85 ntBASIC0.68□□□□□ -2.3
COL2A1P02458 RNA5SP63-201ENST00000391225 112 ntBASIC0.68□□□□□ -2.3
COL2A1P02458 AC073261.1-201ENST00000429409 121 ntBASIC0.68□□□□□ -2.3
COL2A1P02458 RNU7-13P-201ENST00000516413 62 ntBASIC0.68□□□□□ -2.3
COL2A1P02458 RNU6-229P-201ENST00000516614 102 ntBASIC0.68□□□□□ -2.3
COL2A1P02458 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.68□□□□□ -2.3
COL2A1P02458 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.68□□□□□ -2.3
COL2A1P02458 AC244669.1-204ENST00000621564 178 ntBASIC0.68□□□□□ -2.3
COL2A1P02458 RNU6-382P-201ENST00000365181 106 ntBASIC0.67□□□□□ -2.3
COL2A1P02458 RNU6-154P-201ENST00000384306 106 ntBASIC0.67□□□□□ -2.3
COL2A1P02458 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
COL2A1P02458 MIR548L-201ENST00000408303 86 ntBASIC0.67□□□□□ -2.3
COL2A1P02458 RNU6-380P-201ENST00000410207 107 ntBASIC0.67□□□□□ -2.3
COL2A1P02458 AC244505.6-201ENST00000452829 130 ntBASIC0.67□□□□□ -2.3
COL2A1P02458 RNU6-1265P-201ENST00000516342 103 ntBASIC0.67□□□□□ -2.3
COL2A1P02458 AC011195.1-201ENST00000578177 177 ntBASIC0.67□□□□□ -2.3
COL2A1P02458 MIR3678-201ENST00000578455 94 ntBASIC0.67□□□□□ -2.3
COL2A1P02458 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.67□□□□□ -2.3
COL2A1P02458 RNU5F-1-201ENST00000362507 117 ntBASIC0.67□□□□□ -2.3
COL2A1P02458 SNORD45.1-201ENST00000363181 77 ntBASIC0.67□□□□□ -2.3
COL2A1P02458 RNY4P3-201ENST00000365254 95 ntBASIC0.67□□□□□ -2.3
COL2A1P02458 SNORD115-31-201ENST00000365318 82 ntBASIC0.67□□□□□ -2.3
COL2A1P02458 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
COL2A1P02458 SNORD99-201ENST00000408612 74 ntBASIC0.67□□□□□ -2.3
COL2A1P02458 RNU6-935P-201ENST00000410371 100 ntBASIC0.67□□□□□ -2.3
COL2A1P02458 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.67□□□□□ -2.3
COL2A1P02458 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.67□□□□□ -2.3
COL2A1P02458 RNU6-687P-201ENST00000516443 89 ntBASIC0.67□□□□□ -2.3
COL2A1P02458 RNU5B-6P-201ENST00000516765 68 ntBASIC0.67□□□□□ -2.3
COL2A1P02458 RNU6-303P-201ENST00000517091 106 ntBASIC0.67□□□□□ -2.3
COL2A1P02458 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.66□□□□□ -2.3
COL2A1P02458 RNA5SP403-201ENST00000363598 108 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 229.1 ms