Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 MIR548X2-201ENST00000579776 100 ntBASIC-0.92□□□□□ -2.56
CHMP2AO43633 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.92□□□□□ -2.56
CHMP2AO43633 AC025166.1-201ENST00000612411 163 ntBASIC-0.92□□□□□ -2.56
CHMP2AO43633 MIR3179-4-201ENST00000617599 84 ntBASIC-0.92□□□□□ -2.56
CHMP2AO43633 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.93□□□□□ -2.56
CHMP2AO43633 RNU6-379P-201ENST00000363813 104 ntBASIC-0.93□□□□□ -2.56
CHMP2AO43633 RNU6-990P-201ENST00000364385 104 ntBASIC-0.93□□□□□ -2.56
CHMP2AO43633 SNORD58C-201ENST00000365223 64 ntBASIC-0.93□□□□□ -2.56
CHMP2AO43633 SNORD50.2-201ENST00000365465 70 ntBASIC-0.93□□□□□ -2.56
CHMP2AO43633 MIR216B-201ENST00000390186 82 ntBASIC-0.93□□□□□ -2.56
CHMP2AO43633 RNU6-394P-201ENST00000410735 107 ntBASIC-0.93□□□□□ -2.56
CHMP2AO43633 MTND5P41-201ENST00000517498 206 ntBASIC-0.93□□□□□ -2.56
CHMP2AO43633 AL513043.2-201ENST00000573941 143 ntBASIC-0.93□□□□□ -2.56
CHMP2AO43633 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.93□□□□□ -2.56
CHMP2AO43633 MIR4536-1-201ENST00000583537 88 ntBASIC-0.93□□□□□ -2.56
CHMP2AO43633 AC108676.2-201ENST00000605225 163 ntBASIC-0.93□□□□□ -2.56
CHMP2AO43633 RNY4P6-201ENST00000363667 96 ntBASIC-0.94□□□□□ -2.56
CHMP2AO43633 RNU6-200P-201ENST00000364743 107 ntBASIC-0.94□□□□□ -2.56
CHMP2AO43633 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.94□□□□□ -2.56
CHMP2AO43633 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.94□□□□□ -2.56
CHMP2AO43633 RNU6-337P-201ENST00000391243 106 ntBASIC-0.94□□□□□ -2.56
CHMP2AO43633 Z95118.1-201ENST00000421372 247 ntBASIC-0.94□□□□□ -2.56
CHMP2AO43633 RNU6-65P-201ENST00000516332 98 ntBASIC-0.94□□□□□ -2.56
CHMP2AO43633 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.95□□□□□ -2.56
CHMP2AO43633 SNORD95.1-201ENST00000364099 68 ntBASIC-0.95□□□□□ -2.56
CHMP2AO43633 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.95□□□□□ -2.56
CHMP2AO43633 Y_RNA.489-201ENST00000384410 101 ntBASIC-0.95□□□□□ -2.56
CHMP2AO43633 MIR517B-201ENST00000385102 67 ntBASIC-0.95□□□□□ -2.56
CHMP2AO43633 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.95□□□□□ -2.56
CHMP2AO43633 SNORD90-201ENST00000391145 111 ntBASIC-0.95□□□□□ -2.56
CHMP2AO43633 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.95□□□□□ -2.56
CHMP2AO43633 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.95□□□□□ -2.56
CHMP2AO43633 AC021146.6-201ENST00000514659 117 ntBASIC-0.95□□□□□ -2.56
CHMP2AO43633 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.95□□□□□ -2.56
CHMP2AO43633 RNU6-881P-201ENST00000516813 102 ntBASIC-0.95□□□□□ -2.56
CHMP2AO43633 U7.2-201ENST00000607576 63 ntBASIC-0.95□□□□□ -2.56
CHMP2AO43633 MIR6773-201ENST00000612812 74 ntBASIC-0.95□□□□□ -2.56
CHMP2AO43633 AC004792.1-201ENST00000614523 137 ntBASIC-0.95□□□□□ -2.56
CHMP2AO43633 SNORD114-25-201ENST00000363742 72 ntBASIC-0.96□□□□□ -2.56
CHMP2AO43633 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.96□□□□□ -2.56
CHMP2AO43633 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.96□□□□□ -2.56
CHMP2AO43633 MIR518B-201ENST00000385127 83 ntBASIC-0.96□□□□□ -2.56
CHMP2AO43633 AP000533.3-201ENST00000447704 118 ntBASIC-0.96□□□□□ -2.56
CHMP2AO43633 RNU6-426P-201ENST00000516464 97 ntBASIC-0.96□□□□□ -2.56
CHMP2AO43633 MIR6854-201ENST00000614935 69 ntBASIC-0.96□□□□□ -2.56
CHMP2AO43633 MIR6086-201ENST00000638065 55 ntBASIC-0.96□□□□□ -2.56
CHMP2AO43633 RNU6-832P-201ENST00000363319 107 ntBASIC-0.97□□□□□ -2.56
CHMP2AO43633 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.97□□□□□ -2.56
CHMP2AO43633 MIR3144-201ENST00000579460 79 ntBASIC-0.97□□□□□ -2.56
CHMP2AO43633 MIR548Z-201ENST00000584743 97 ntBASIC-0.97□□□□□ -2.56
CHMP2AO43633 AC096720.1-201ENST00000604441 183 ntBASIC-0.97□□□□□ -2.56
CHMP2AO43633 RNA5SP368-201ENST00000364298 116 ntBASIC-0.98□□□□□ -2.57
CHMP2AO43633 RNU6-463P-201ENST00000384340 107 ntBASIC-0.98□□□□□ -2.57
CHMP2AO43633 U3.27-201ENST00000391237 200 ntBASIC-0.98□□□□□ -2.57
CHMP2AO43633 RNA5SP25-201ENST00000410815 110 ntBASIC-0.98□□□□□ -2.57
CHMP2AO43633 RNU6-592P-201ENST00000411333 103 ntBASIC-0.98□□□□□ -2.57
CHMP2AO43633 AC090617.8-201ENST00000623339 167 ntBASIC-0.98□□□□□ -2.57
CHMP2AO43633 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.99□□□□□ -2.57
CHMP2AO43633 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.99□□□□□ -2.57
CHMP2AO43633 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.99□□□□□ -2.57
CHMP2AO43633 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.99□□□□□ -2.57
CHMP2AO43633 AC022137.1-201ENST00000483735 151 ntBASIC-0.99□□□□□ -2.57
CHMP2AO43633 MIR3064-201ENST00000581130 66 ntBASIC-0.99□□□□□ -2.57
CHMP2AO43633 SNORD114-4-201ENST00000363962 75 ntBASIC-1□□□□□ -2.57
CHMP2AO43633 Y_RNA.400-201ENST00000383963 111 ntBASIC-1□□□□□ -2.57
CHMP2AO43633 Y_RNA.555-201ENST00000384673 110 ntBASIC-1□□□□□ -2.57
CHMP2AO43633 MIRLET7B-201ENST00000385140 83 ntBASIC-1□□□□□ -2.57
CHMP2AO43633 MIR4694-201ENST00000578534 80 ntBASIC-1□□□□□ -2.57
CHMP2AO43633 AC103810.7-201ENST00000607821 91 ntBASIC-1□□□□□ -2.57
CHMP2AO43633 RNU6-495P-201ENST00000362995 107 ntBASIC-1.01□□□□□ -2.57
CHMP2AO43633 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.01□□□□□ -2.57
CHMP2AO43633 SNORA63.6-201ENST00000364921 119 ntBASIC-1.01□□□□□ -2.57
CHMP2AO43633 RNA5SP292-201ENST00000390974 118 ntBASIC-1.01□□□□□ -2.57
CHMP2AO43633 RNU6-772P-201ENST00000516042 105 ntBASIC-1.01□□□□□ -2.57
CHMP2AO43633 RNA5SP476-201ENST00000516613 103 ntBASIC-1.01□□□□□ -2.57
CHMP2AO43633 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.02□□□□□ -2.57
CHMP2AO43633 SNORD115-23-201ENST00000364461 82 ntBASIC-1.02□□□□□ -2.57
CHMP2AO43633 SNORA24B-201ENST00000384176 131 ntBASIC-1.02□□□□□ -2.57
CHMP2AO43633 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.02□□□□□ -2.57
CHMP2AO43633 MTND4LP9-201ENST00000427694 174 ntBASIC-1.02□□□□□ -2.57
CHMP2AO43633 RNU7-107P-201ENST00000459121 61 ntBASIC-1.02□□□□□ -2.57
CHMP2AO43633 SNORD2-201ENST00000459163 69 ntBASIC-1.02□□□□□ -2.57
CHMP2AO43633 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.02□□□□□ -2.57
CHMP2AO43633 snoR1.1-201ENST00000628177 80 ntBASIC-1.02□□□□□ -2.57
CHMP2AO43633 SNORA63.2-201ENST00000362603 126 ntBASIC-1.03□□□□□ -2.57
CHMP2AO43633 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.03□□□□□ -2.57
CHMP2AO43633 MIR196A1-201ENST00000388006 70 ntBASIC-1.03□□□□□ -2.57
CHMP2AO43633 AL500527.2-201ENST00000454105 95 ntBASIC-1.03□□□□□ -2.57
CHMP2AO43633 RNY3P2-201ENST00000362918 102 ntBASIC-1.04□□□□□ -2.58
CHMP2AO43633 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.04□□□□□ -2.58
CHMP2AO43633 SNORD4B-201ENST00000459083 72 ntBASIC-1.04□□□□□ -2.58
CHMP2AO43633 AC068339.1-201ENST00000526965 141 ntBASIC-1.04□□□□□ -2.58
CHMP2AO43633 AC104996.3-201ENST00000590718 94 ntBASIC-1.04□□□□□ -2.58
CHMP2AO43633 RNU4-36P-201ENST00000364294 144 ntBASIC-1.05□□□□□ -2.58
CHMP2AO43633 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.05□□□□□ -2.58
CHMP2AO43633 MIR124-2-201ENST00000385081 109 ntBASIC-1.05□□□□□ -2.58
CHMP2AO43633 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.05□□□□□ -2.58
CHMP2AO43633 RNU6-795P-201ENST00000516323 103 ntBASIC-1.05□□□□□ -2.58
CHMP2AO43633 MIR224-201ENST00000384889 81 ntBASIC-1.06□□□□□ -2.58
CHMP2AO43633 SNORA13-201ENST00000458790 133 ntBASIC-1.06□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 232.3 ms