Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 RNA5SP484-201ENST00000458857 111 ntBASIC0.3□□□□□ -2.36
NPC1O15118 snoU13.19-201ENST00000459148 104 ntBASIC0.3□□□□□ -2.36
NPC1O15118 RNU6-1232P-201ENST00000516299 86 ntBASIC0.3□□□□□ -2.36
NPC1O15118 NAMPTP3-201ENST00000569273 224 ntBASIC0.3□□□□□ -2.36
NPC1O15118 MIR2052-201ENST00000636055 55 ntBASIC0.3□□□□□ -2.36
NPC1O15118 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.3□□□□□ -2.36
NPC1O15118 SNORD116-10-201ENST00000363791 102 ntBASIC0.29□□□□□ -2.36
NPC1O15118 RNU1-141P-201ENST00000364623 158 ntBASIC0.29□□□□□ -2.36
NPC1O15118 RNU6-519P-201ENST00000410590 108 ntBASIC0.29□□□□□ -2.36
NPC1O15118 MTATP8P2-201ENST00000435212 202 ntBASIC0.29□□□□□ -2.36
NPC1O15118 SNORA9.1-201ENST00000362412 131 ntBASIC0.28□□□□□ -2.36
NPC1O15118 RNA5SP128-201ENST00000365305 116 ntBASIC0.28□□□□□ -2.36
NPC1O15118 RNU6-147P-201ENST00000383983 107 ntBASIC0.28□□□□□ -2.36
NPC1O15118 SNORD110-201ENST00000408189 75 ntBASIC0.28□□□□□ -2.36
NPC1O15118 RNU6-1057P-201ENST00000517162 102 ntBASIC0.28□□□□□ -2.36
NPC1O15118 AC069113.3-201ENST00000521019 150 ntBASIC0.28□□□□□ -2.36
NPC1O15118 MIR4514-201ENST00000581410 57 ntBASIC0.28□□□□□ -2.36
NPC1O15118 U7.6-201ENST00000610841 64 ntBASIC0.28□□□□□ -2.36
NPC1O15118 U7.3-201ENST00000616123 62 ntBASIC0.28□□□□□ -2.36
NPC1O15118 Y_RNA.239-201ENST00000364444 113 ntBASIC0.27□□□□□ -2.37
NPC1O15118 RNU6-32P-201ENST00000383948 107 ntBASIC0.27□□□□□ -2.37
NPC1O15118 RNU6-13P-201ENST00000384248 107 ntBASIC0.27□□□□□ -2.37
NPC1O15118 RNU6-12P-201ENST00000384604 107 ntBASIC0.27□□□□□ -2.37
NPC1O15118 RNU6-41P-201ENST00000384741 107 ntBASIC0.27□□□□□ -2.37
NPC1O15118 AC093423.1-201ENST00000440817 142 ntBASIC0.27□□□□□ -2.37
NPC1O15118 SNORD4B-201ENST00000459083 72 ntBASIC0.27□□□□□ -2.37
NPC1O15118 RNU7-129P-201ENST00000516128 62 ntBASIC0.27□□□□□ -2.37
NPC1O15118 AP001318.4-201ENST00000616637 121 ntBASIC0.27□□□□□ -2.37
NPC1O15118 RNU6-640P-201ENST00000363693 105 ntBASIC0.26□□□□□ -2.37
NPC1O15118 Y_RNA.348-201ENST00000365403 103 ntBASIC0.26□□□□□ -2.37
NPC1O15118 RNU6-935P-201ENST00000410371 100 ntBASIC0.26□□□□□ -2.37
NPC1O15118 RNU6-162P-201ENST00000516228 103 ntBASIC0.26□□□□□ -2.37
NPC1O15118 SNORA40.13-201ENST00000516379 120 ntBASIC0.26□□□□□ -2.37
NPC1O15118 MIR4315-1-201ENST00000636800 73 ntBASIC0.26□□□□□ -2.37
NPC1O15118 MIR4315-2-201ENST00000640925 73 ntBASIC0.26□□□□□ -2.37
NPC1O15118 RNU6-132P-201ENST00000383863 107 ntBASIC0.25□□□□□ -2.37
NPC1O15118 RNU6-905P-201ENST00000384434 107 ntBASIC0.25□□□□□ -2.37
NPC1O15118 Z95118.1-201ENST00000421372 247 ntBASIC0.25□□□□□ -2.37
NPC1O15118 MIRLET7F1-201ENST00000362202 87 ntBASIC0.24□□□□□ -2.37
NPC1O15118 Y_RNA.185-201ENST00000363894 100 ntBASIC0.24□□□□□ -2.37
NPC1O15118 MIR548U-201ENST00000390728 81 ntBASIC0.24□□□□□ -2.37
NPC1O15118 MIR4460-201ENST00000577862 86 ntBASIC0.24□□□□□ -2.37
NPC1O15118 Y_RNA.190-201ENST00000363964 101 ntBASIC0.23□□□□□ -2.37
NPC1O15118 Y_RNA.290-201ENST00000364879 114 ntBASIC0.23□□□□□ -2.37
NPC1O15118 MIR488-201ENST00000365739 83 ntBASIC0.23□□□□□ -2.37
NPC1O15118 Y_RNA.495-201ENST00000384435 112 ntBASIC0.23□□□□□ -2.37
NPC1O15118 MIR4768-201ENST00000585270 74 ntBASIC0.23□□□□□ -2.37
NPC1O15118 AC069503.3-201ENST00000618674 145 ntBASIC0.23□□□□□ -2.37
NPC1O15118 MIR499B-201ENST00000636498 73 ntBASIC0.23□□□□□ -2.37
NPC1O15118 MIR371B-201ENST00000638082 66 ntBASIC0.23□□□□□ -2.37
NPC1O15118 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.23□□□□□ -2.37
NPC1O15118 RNU6-153P-201ENST00000364422 104 ntBASIC0.22□□□□□ -2.37
NPC1O15118 MIR216B-201ENST00000390186 82 ntBASIC0.22□□□□□ -2.37
NPC1O15118 MIR501-201ENST00000390204 84 ntBASIC0.22□□□□□ -2.37
NPC1O15118 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.22□□□□□ -2.37
NPC1O15118 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
NPC1O15118 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.22□□□□□ -2.37
NPC1O15118 MIR2909-201ENST00000617113 69 ntBASIC0.22□□□□□ -2.37
NPC1O15118 MIR6759-201ENST00000638110 65 ntBASIC0.22□□□□□ -2.37
NPC1O15118 SNORD90-201ENST00000391145 111 ntBASIC0.21□□□□□ -2.38
NPC1O15118 MIR548H2-201ENST00000408874 88 ntBASIC0.21□□□□□ -2.38
NPC1O15118 Y_RNA.609-201ENST00000410669 89 ntBASIC0.21□□□□□ -2.38
NPC1O15118 HMGN2P22-201ENST00000427588 175 ntBASIC0.21□□□□□ -2.38
NPC1O15118 AC026421.1-201ENST00000519101 163 ntBASIC0.21□□□□□ -2.38
NPC1O15118 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.21□□□□□ -2.38
NPC1O15118 RNU6-811P-201ENST00000384069 107 ntBASIC0.2□□□□□ -2.38
NPC1O15118 MIR451A-201ENST00000385059 72 ntBASIC0.2□□□□□ -2.38
NPC1O15118 RNU6-127P-201ENST00000390897 107 ntBASIC0.2□□□□□ -2.38
NPC1O15118 RNA5SP292-201ENST00000390974 118 ntBASIC0.2□□□□□ -2.38
NPC1O15118 MIR5589-201ENST00000579442 60 ntBASIC0.2□□□□□ -2.38
NPC1O15118 YWHAEP2-201ENST00000580066 112 ntBASIC0.2□□□□□ -2.38
NPC1O15118 MIR3064-201ENST00000581130 66 ntBASIC0.2□□□□□ -2.38
NPC1O15118 MIR548AD-201ENST00000584780 82 ntBASIC0.2□□□□□ -2.38
NPC1O15118 AC104996.3-201ENST00000590718 94 ntBASIC0.2□□□□□ -2.38
NPC1O15118 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.2□□□□□ -2.38
NPC1O15118 Y_RNA.81-201ENST00000362997 102 ntBASIC0.19□□□□□ -2.38
NPC1O15118 Y_RNA.125-201ENST00000363371 111 ntBASIC0.19□□□□□ -2.38
NPC1O15118 RNU6-30P-201ENST00000384561 107 ntBASIC0.19□□□□□ -2.38
NPC1O15118 MT-TY-201ENST00000387409 66 ntBASIC0.19□□□□□ -2.38
NPC1O15118 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
NPC1O15118 RNA5SP89-201ENST00000410300 108 ntBASIC0.19□□□□□ -2.38
NPC1O15118 Y_RNA.677-201ENST00000516401 85 ntBASIC0.19□□□□□ -2.38
NPC1O15118 RNU6-161P-201ENST00000363051 106 ntBASIC0.18□□□□□ -2.38
NPC1O15118 SNORD115-27-201ENST00000364430 82 ntBASIC0.18□□□□□ -2.38
NPC1O15118 IGLVI-20-201ENST00000519296 130 ntBASIC0.18□□□□□ -2.38
NPC1O15118 MIR4677-201ENST00000584153 80 ntBASIC0.18□□□□□ -2.38
NPC1O15118 MIR3925-201ENST00000584674 77 ntBASIC0.18□□□□□ -2.38
NPC1O15118 RNU6-652P-201ENST00000365488 107 ntBASIC0.17□□□□□ -2.38
NPC1O15118 Y_RNA.491-201ENST00000384417 107 ntBASIC0.17□□□□□ -2.38
NPC1O15118 RNY1P7-201ENST00000384743 110 ntBASIC0.17□□□□□ -2.38
NPC1O15118 U3.27-201ENST00000391237 200 ntBASIC0.17□□□□□ -2.38
NPC1O15118 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.17□□□□□ -2.38
NPC1O15118 SNORA25.13-201ENST00000516395 103 ntBASIC0.17□□□□□ -2.38
NPC1O15118 RNA5SP67-201ENST00000516422 131 ntBASIC0.17□□□□□ -2.38
NPC1O15118 MIR4636-201ENST00000582271 80 ntBASIC0.17□□□□□ -2.38
NPC1O15118 MIR548AE1-201ENST00000583292 70 ntBASIC0.17□□□□□ -2.38
NPC1O15118 MIR4473-201ENST00000583731 91 ntBASIC0.17□□□□□ -2.38
NPC1O15118 MALAT1.1-201ENST00000618249 95 ntBASIC0.17□□□□□ -2.38
NPC1O15118 RNU4-32P-201ENST00000363404 141 ntBASIC0.16□□□□□ -2.38
NPC1O15118 RNY4P3-201ENST00000365254 95 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 278.9 ms