Protein–RNA interactions for Protein: A2RU48

SMCO3, Single-pass membrane and coiled-coil domain-containing protein 3, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3A2RU48 RNU6-151P-201ENST00000364158 107 ntBASIC-1.57□□□□□ -2.66
SMCO3A2RU48 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.57□□□□□ -2.66
SMCO3A2RU48 RNU6-738P-201ENST00000384531 106 ntBASIC-1.57□□□□□ -2.66
SMCO3A2RU48 RNU7-85P-201ENST00000458851 63 ntBASIC-1.57□□□□□ -2.66
SMCO3A2RU48 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.57□□□□□ -2.66
SMCO3A2RU48 SNORD18.2-201ENST00000459604 70 ntBASIC-1.57□□□□□ -2.66
SMCO3A2RU48 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.57□□□□□ -2.66
SMCO3A2RU48 RNU6-495P-201ENST00000362995 107 ntBASIC-1.58□□□□□ -2.66
SMCO3A2RU48 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.58□□□□□ -2.66
SMCO3A2RU48 RNU6-431P-201ENST00000383874 107 ntBASIC-1.58□□□□□ -2.66
SMCO3A2RU48 SNORD64-201ENST00000386683 67 ntBASIC-1.58□□□□□ -2.66
SMCO3A2RU48 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.58□□□□□ -2.66
SMCO3A2RU48 RNU6-132P-201ENST00000383863 107 ntBASIC-1.59□□□□□ -2.66
SMCO3A2RU48 MIR1302-3-201ENST00000408128 138 ntBASIC-1.59□□□□□ -2.66
SMCO3A2RU48 RNU6-990P-201ENST00000364385 104 ntBASIC-1.6□□□□□ -2.67
SMCO3A2RU48 MIR577-201ENST00000385196 96 ntBASIC-1.6□□□□□ -2.67
SMCO3A2RU48 AL158147.1-201ENST00000443970 75 ntBASIC-1.6□□□□□ -2.67
SMCO3A2RU48 MIR3140-201ENST00000583685 90 ntBASIC-1.6□□□□□ -2.67
SMCO3A2RU48 uc_338.19-201ENST00000616808 99 ntBASIC-1.6□□□□□ -2.67
SMCO3A2RU48 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.6□□□□□ -2.67
SMCO3A2RU48 AP001340.1-201ENST00000624405 217 ntBASIC-1.6□□□□□ -2.67
SMCO3A2RU48 SNORA63.2-201ENST00000362603 126 ntBASIC-1.61□□□□□ -2.67
SMCO3A2RU48 SNORD114-15-201ENST00000364687 72 ntBASIC-1.61□□□□□ -2.67
SMCO3A2RU48 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.61□□□□□ -2.67
SMCO3A2RU48 MIR147A-201ENST00000385079 72 ntBASIC-1.61□□□□□ -2.67
SMCO3A2RU48 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.61□□□□□ -2.67
SMCO3A2RU48 MIR124-2-201ENST00000385081 109 ntBASIC-1.62□□□□□ -2.67
SMCO3A2RU48 RNU6-274P-201ENST00000459566 107 ntBASIC-1.62□□□□□ -2.67
SMCO3A2RU48 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.62□□□□□ -2.67
SMCO3A2RU48 RNU6-861P-201ENST00000516745 106 ntBASIC-1.62□□□□□ -2.67
SMCO3A2RU48 AL513043.2-201ENST00000573941 143 ntBASIC-1.62□□□□□ -2.67
SMCO3A2RU48 MIR4499-201ENST00000584834 69 ntBASIC-1.62□□□□□ -2.67
SMCO3A2RU48 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.63□□□□□ -2.67
SMCO3A2RU48 MIR513C-201ENST00000401352 84 ntBASIC-1.63□□□□□ -2.67
SMCO3A2RU48 AP001094.1-201ENST00000579805 193 ntBASIC-1.63□□□□□ -2.67
SMCO3A2RU48 AC140658.3-201ENST00000567603 271 ntBASIC-1.64□□□□□ -2.67
SMCO3A2RU48 YWHAEP3-201ENST00000582767 121 ntBASIC-1.64□□□□□ -2.67
SMCO3A2RU48 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.64□□□□□ -2.67
SMCO3A2RU48 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.64□□□□□ -2.67
SMCO3A2RU48 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.64□□□□□ -2.67
SMCO3A2RU48 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.64□□□□□ -2.67
SMCO3A2RU48 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.64□□□□□ -2.67
SMCO3A2RU48 SNORA62.4-201ENST00000365504 151 ntBASIC-1.65□□□□□ -2.67
SMCO3A2RU48 AC021146.9-201ENST00000512503 156 ntBASIC-1.65□□□□□ -2.67
SMCO3A2RU48 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.65□□□□□ -2.67
SMCO3A2RU48 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.66□□□□□ -2.68
SMCO3A2RU48 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.66□□□□□ -2.68
SMCO3A2RU48 SNORA24B-201ENST00000384176 131 ntBASIC-1.66□□□□□ -2.68
SMCO3A2RU48 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.66□□□□□ -2.68
SMCO3A2RU48 MIR4694-201ENST00000578534 80 ntBASIC-1.66□□□□□ -2.68
SMCO3A2RU48 MIR3064-201ENST00000581130 66 ntBASIC-1.66□□□□□ -2.68
SMCO3A2RU48 AC025166.1-201ENST00000612411 163 ntBASIC-1.66□□□□□ -2.68
SMCO3A2RU48 MIR382-201ENST00000637119 76 ntBASIC-1.66□□□□□ -2.68
SMCO3A2RU48 RNU6-208P-201ENST00000362431 107 ntBASIC-1.67□□□□□ -2.68
SMCO3A2RU48 RNU6-682P-201ENST00000363843 106 ntBASIC-1.67□□□□□ -2.68
SMCO3A2RU48 SNORD114-17-201ENST00000364699 75 ntBASIC-1.67□□□□□ -2.68
SMCO3A2RU48 RNY4P3-201ENST00000365254 95 ntBASIC-1.67□□□□□ -2.68
SMCO3A2RU48 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.67□□□□□ -2.68
SMCO3A2RU48 AC090617.8-201ENST00000623339 167 ntBASIC-1.67□□□□□ -2.68
SMCO3A2RU48 U6.96-201ENST00000636425 70 ntBASIC-1.67□□□□□ -2.68
SMCO3A2RU48 RNU6-832P-201ENST00000363319 107 ntBASIC-1.68□□□□□ -2.68
SMCO3A2RU48 MIR548U-201ENST00000390728 81 ntBASIC-1.68□□□□□ -2.68
SMCO3A2RU48 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.68□□□□□ -2.68
SMCO3A2RU48 AC068339.1-201ENST00000526965 141 ntBASIC-1.68□□□□□ -2.68
SMCO3A2RU48 SNORD75.2-201ENST00000408784 58 ntBASIC-1.69□□□□□ -2.68
SMCO3A2RU48 SCARNA18B-201ENST00000458806 135 ntBASIC-1.69□□□□□ -2.68
SMCO3A2RU48 RNU7-24P-201ENST00000458867 62 ntBASIC-1.69□□□□□ -2.68
SMCO3A2RU48 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.69□□□□□ -2.68
SMCO3A2RU48 RNU7-120P-201ENST00000459334 63 ntBASIC-1.69□□□□□ -2.68
SMCO3A2RU48 MIR378F-201ENST00000578143 78 ntBASIC-1.69□□□□□ -2.68
SMCO3A2RU48 U7.2-201ENST00000607576 63 ntBASIC-1.69□□□□□ -2.68
SMCO3A2RU48 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.69□□□□□ -2.68
SMCO3A2RU48 SNORA63-201ENST00000363450 132 ntBASIC-1.7□□□□□ -2.68
SMCO3A2RU48 SNORD58C-201ENST00000365223 64 ntBASIC-1.7□□□□□ -2.68
SMCO3A2RU48 AL118496.2-201ENST00000448300 230 ntBASIC-1.7□□□□□ -2.68
SMCO3A2RU48 MIR3613-201ENST00000579844 87 ntBASIC-1.7□□□□□ -2.68
SMCO3A2RU48 MIR4464-201ENST00000580818 92 ntBASIC-1.7□□□□□ -2.68
SMCO3A2RU48 AC104996.3-201ENST00000590718 94 ntBASIC-1.7□□□□□ -2.68
SMCO3A2RU48 MIR6738-201ENST00000619620 64 ntBASIC-1.7□□□□□ -2.68
SMCO3A2RU48 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.71□□□□□ -2.68
SMCO3A2RU48 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.72□□□□□ -2.68
SMCO3A2RU48 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.72□□□□□ -2.68
SMCO3A2RU48 SNORD116-18-201ENST00000383961 92 ntBASIC-1.72□□□□□ -2.68
SMCO3A2RU48 RNU6-24P-201ENST00000384440 107 ntBASIC-1.72□□□□□ -2.68
SMCO3A2RU48 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.72□□□□□ -2.68
SMCO3A2RU48 RNA5SP470-201ENST00000516463 106 ntBASIC-1.72□□□□□ -2.68
SMCO3A2RU48 MIR548X2-201ENST00000579776 100 ntBASIC-1.72□□□□□ -2.68
SMCO3A2RU48 MIR4324-201ENST00000584846 72 ntBASIC-1.72□□□□□ -2.68
SMCO3A2RU48 AL353803.5-201ENST00000599815 141 ntBASIC-1.72□□□□□ -2.68
SMCO3A2RU48 RNY3P2-201ENST00000362918 102 ntBASIC-1.73□□□□□ -2.69
SMCO3A2RU48 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.73□□□□□ -2.69
SMCO3A2RU48 MIR548A1-201ENST00000385041 97 ntBASIC-1.73□□□□□ -2.69
SMCO3A2RU48 SNORD4B-201ENST00000459083 72 ntBASIC-1.73□□□□□ -2.69
SMCO3A2RU48 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.73□□□□□ -2.69
SMCO3A2RU48 MIR6086-201ENST00000638065 55 ntBASIC-1.73□□□□□ -2.69
SMCO3A2RU48 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.74□□□□□ -2.69
SMCO3A2RU48 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.74□□□□□ -2.69
SMCO3A2RU48 RNU6-644P-201ENST00000391155 98 ntBASIC-1.74□□□□□ -2.69
SMCO3A2RU48 AL035470.1-201ENST00000622571 220 ntBASIC-1.74□□□□□ -2.69
SMCO3A2RU48 snoU83B.1-201ENST00000517136 88 ntBASIC-1.75□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 249.4 ms