Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 MIR548O2-201ENST00000616090 70 ntBASIC0.21□□□□□ -2.38
TCRBV7S3A2A0A539 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
TCRBV7S3A2A0A539 Y_RNA.491-201ENST00000384417 107 ntBASIC0.2□□□□□ -2.38
TCRBV7S3A2A0A539 RNU6-127P-201ENST00000390897 107 ntBASIC0.2□□□□□ -2.38
TCRBV7S3A2A0A539 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.2□□□□□ -2.38
TCRBV7S3A2A0A539 SNORA25.13-201ENST00000516395 103 ntBASIC0.2□□□□□ -2.38
TCRBV7S3A2A0A539 MIR4677-201ENST00000584153 80 ntBASIC0.2□□□□□ -2.38
TCRBV7S3A2A0A539 SNORA42.1-201ENST00000363515 137 ntBASIC0.19□□□□□ -2.38
TCRBV7S3A2A0A539 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
TCRBV7S3A2A0A539 RNA5SP89-201ENST00000410300 108 ntBASIC0.19□□□□□ -2.38
TCRBV7S3A2A0A539 RNU6-782P-201ENST00000516852 104 ntBASIC0.19□□□□□ -2.38
TCRBV7S3A2A0A539 YWHAEP2-201ENST00000580066 112 ntBASIC0.19□□□□□ -2.38
TCRBV7S3A2A0A539 MIR499B-201ENST00000636498 73 ntBASIC0.19□□□□□ -2.38
TCRBV7S3A2A0A539 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.18□□□□□ -2.38
TCRBV7S3A2A0A539 RNA5SP292-201ENST00000390974 118 ntBASIC0.18□□□□□ -2.38
TCRBV7S3A2A0A539 RNU7-129P-201ENST00000516128 62 ntBASIC0.18□□□□□ -2.38
TCRBV7S3A2A0A539 MIR488-201ENST00000365739 83 ntBASIC0.17□□□□□ -2.38
TCRBV7S3A2A0A539 SNORA18.5-201ENST00000516616 101 ntBASIC0.17□□□□□ -2.38
TCRBV7S3A2A0A539 SNORA63.2-201ENST00000362603 126 ntBASIC0.16□□□□□ -2.38
TCRBV7S3A2A0A539 RNU6-161P-201ENST00000363051 106 ntBASIC0.16□□□□□ -2.38
TCRBV7S3A2A0A539 RNU6-652P-201ENST00000365488 107 ntBASIC0.16□□□□□ -2.38
TCRBV7S3A2A0A539 RNU4-32P-201ENST00000363404 141 ntBASIC0.15□□□□□ -2.39
TCRBV7S3A2A0A539 MIR1236-201ENST00000408340 102 ntBASIC0.15□□□□□ -2.39
TCRBV7S3A2A0A539 Y_RNA.676-201ENST00000516393 96 ntBASIC0.15□□□□□ -2.39
TCRBV7S3A2A0A539 MIR4743-201ENST00000584576 69 ntBASIC0.15□□□□□ -2.39
TCRBV7S3A2A0A539 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.15□□□□□ -2.39
TCRBV7S3A2A0A539 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.14□□□□□ -2.39
TCRBV7S3A2A0A539 Y_RNA.220-201ENST00000364244 109 ntBASIC0.14□□□□□ -2.39
TCRBV7S3A2A0A539 RNU6-1051P-201ENST00000365471 102 ntBASIC0.14□□□□□ -2.39
TCRBV7S3A2A0A539 RNU5B-6P-201ENST00000516765 68 ntBASIC0.14□□□□□ -2.39
TCRBV7S3A2A0A539 MIR3925-201ENST00000584674 77 ntBASIC0.14□□□□□ -2.39
TCRBV7S3A2A0A539 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.14□□□□□ -2.39
TCRBV7S3A2A0A539 AC022709.1-201ENST00000615967 87 ntBASIC0.14□□□□□ -2.39
TCRBV7S3A2A0A539 uc_338.10-201ENST00000621872 182 ntBASIC0.14□□□□□ -2.39
TCRBV7S3A2A0A539 RNY4P3-201ENST00000365254 95 ntBASIC0.13□□□□□ -2.39
TCRBV7S3A2A0A539 RNU6V-201ENST00000384105 107 ntBASIC0.13□□□□□ -2.39
TCRBV7S3A2A0A539 FGF7P7-201ENST00000514120 227 ntBASIC0.13□□□□□ -2.39
TCRBV7S3A2A0A539 MIR4668-201ENST00000582284 70 ntBASIC0.13□□□□□ -2.39
TCRBV7S3A2A0A539 RNU6-633P-201ENST00000362612 103 ntBASIC0.12□□□□□ -2.39
TCRBV7S3A2A0A539 RNA5SP214-201ENST00000363378 118 ntBASIC0.12□□□□□ -2.39
TCRBV7S3A2A0A539 SNORD114-9-201ENST00000364370 72 ntBASIC0.12□□□□□ -2.39
TCRBV7S3A2A0A539 Y_RNA.407-201ENST00000383986 113 ntBASIC0.12□□□□□ -2.39
TCRBV7S3A2A0A539 SNORA24B-201ENST00000384176 131 ntBASIC0.12□□□□□ -2.39
TCRBV7S3A2A0A539 SNORD116-22-201ENST00000384430 92 ntBASIC0.12□□□□□ -2.39
TCRBV7S3A2A0A539 MIR876-201ENST00000401147 81 ntBASIC0.12□□□□□ -2.39
TCRBV7S3A2A0A539 MIR892B-201ENST00000401279 77 ntBASIC0.12□□□□□ -2.39
TCRBV7S3A2A0A539 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
TCRBV7S3A2A0A539 MIR548H2-201ENST00000408874 88 ntBASIC0.12□□□□□ -2.39
TCRBV7S3A2A0A539 MTATP6P29-201ENST00000415057 132 ntBASIC0.12□□□□□ -2.39
TCRBV7S3A2A0A539 SNORA62.5-201ENST00000516634 120 ntBASIC0.12□□□□□ -2.39
TCRBV7S3A2A0A539 MIR4473-201ENST00000583731 91 ntBASIC0.12□□□□□ -2.39
TCRBV7S3A2A0A539 SNORD114-23-201ENST00000363536 72 ntBASIC0.11□□□□□ -2.39
TCRBV7S3A2A0A539 Y_RNA.437-201ENST00000384113 113 ntBASIC0.11□□□□□ -2.39
TCRBV7S3A2A0A539 MIR610-201ENST00000385139 96 ntBASIC0.11□□□□□ -2.39
TCRBV7S3A2A0A539 Y_RNA.620-201ENST00000411009 88 ntBASIC0.11□□□□□ -2.39
TCRBV7S3A2A0A539 RNU6-1052P-201ENST00000411398 104 ntBASIC0.11□□□□□ -2.39
TCRBV7S3A2A0A539 RNU6-719P-201ENST00000516671 104 ntBASIC0.11□□□□□ -2.39
TCRBV7S3A2A0A539 Y_RNA.694-201ENST00000516677 117 ntBASIC0.11□□□□□ -2.39
TCRBV7S3A2A0A539 MIR3140-201ENST00000583685 90 ntBASIC0.11□□□□□ -2.39
TCRBV7S3A2A0A539 AC104408.1-201ENST00000605241 170 ntBASIC0.11□□□□□ -2.39
TCRBV7S3A2A0A539 RNY1P4-201ENST00000384595 115 ntBASIC0.1□□□□□ -2.39
TCRBV7S3A2A0A539 MIR516B1-201ENST00000385211 90 ntBASIC0.1□□□□□ -2.39
TCRBV7S3A2A0A539 MIR643-201ENST00000385267 97 ntBASIC0.1□□□□□ -2.39
TCRBV7S3A2A0A539 SNORA75.1-201ENST00000391130 148 ntBASIC0.1□□□□□ -2.39
TCRBV7S3A2A0A539 RNA5SP299-201ENST00000391203 116 ntBASIC0.1□□□□□ -2.39
TCRBV7S3A2A0A539 snoU13.18-201ENST00000459483 104 ntBASIC0.1□□□□□ -2.39
TCRBV7S3A2A0A539 MIR4796-201ENST00000580742 81 ntBASIC0.1□□□□□ -2.39
TCRBV7S3A2A0A539 MIR548AE1-201ENST00000583292 70 ntBASIC0.1□□□□□ -2.39
TCRBV7S3A2A0A539 AC084368.1-201ENST00000620935 65 ntBASIC0.1□□□□□ -2.39
TCRBV7S3A2A0A539 SNORD115-27-201ENST00000364430 82 ntBASIC0.09□□□□□ -2.4
TCRBV7S3A2A0A539 RNU6-219P-201ENST00000364728 107 ntBASIC0.09□□□□□ -2.4
TCRBV7S3A2A0A539 Y_RNA.558-201ENST00000384685 113 ntBASIC0.09□□□□□ -2.4
TCRBV7S3A2A0A539 RNY1P7-201ENST00000384743 110 ntBASIC0.09□□□□□ -2.4
TCRBV7S3A2A0A539 MIR519C-201ENST00000385053 87 ntBASIC0.09□□□□□ -2.4
TCRBV7S3A2A0A539 RNU6-497P-201ENST00000365316 104 ntBASIC0.08□□□□□ -2.4
TCRBV7S3A2A0A539 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
TCRBV7S3A2A0A539 SNORD90-201ENST00000391145 111 ntBASIC0.08□□□□□ -2.4
TCRBV7S3A2A0A539 MIR1287-201ENST00000408492 90 ntBASIC0.08□□□□□ -2.4
TCRBV7S3A2A0A539 RNU6-844P-201ENST00000517175 102 ntBASIC0.08□□□□□ -2.4
TCRBV7S3A2A0A539 SCARNA11.2-201ENST00000517183 154 ntBASIC0.08□□□□□ -2.4
TCRBV7S3A2A0A539 MIR6515-201ENST00000619843 57 ntBASIC0.08□□□□□ -2.4
TCRBV7S3A2A0A539 MIR924-201ENST00000638017 53 ntBASIC0.08□□□□□ -2.4
TCRBV7S3A2A0A539 RNU6-54P-201ENST00000365563 107 ntBASIC0.07□□□□□ -2.4
TCRBV7S3A2A0A539 RNA5SP325-201ENST00000363756 130 ntBASIC0.06□□□□□ -2.4
TCRBV7S3A2A0A539 Y_RNA.226-201ENST00000364337 114 ntBASIC0.06□□□□□ -2.4
TCRBV7S3A2A0A539 RNU6-675P-201ENST00000384236 104 ntBASIC0.06□□□□□ -2.4
TCRBV7S3A2A0A539 RNU6-154P-201ENST00000384306 106 ntBASIC0.06□□□□□ -2.4
TCRBV7S3A2A0A539 RNU6-1177P-201ENST00000391058 104 ntBASIC0.06□□□□□ -2.4
TCRBV7S3A2A0A539 RNU7-153P-201ENST00000516455 62 ntBASIC0.06□□□□□ -2.4
TCRBV7S3A2A0A539 AC010487.4-201ENST00000637027 61 ntBASIC0.06□□□□□ -2.4
TCRBV7S3A2A0A539 RNU6-495P-201ENST00000362995 107 ntBASIC0.05□□□□□ -2.4
TCRBV7S3A2A0A539 SNORD114-4-201ENST00000363962 75 ntBASIC0.05□□□□□ -2.4
TCRBV7S3A2A0A539 SNORD114-29-201ENST00000364819 70 ntBASIC0.05□□□□□ -2.4
TCRBV7S3A2A0A539 RNU6-1131P-201ENST00000364955 107 ntBASIC0.05□□□□□ -2.4
TCRBV7S3A2A0A539 RNU6-49P-201ENST00000384256 107 ntBASIC0.05□□□□□ -2.4
TCRBV7S3A2A0A539 MIR598-201ENST00000384868 97 ntBASIC0.05□□□□□ -2.4
TCRBV7S3A2A0A539 MIR145-201ENST00000384967 88 ntBASIC0.05□□□□□ -2.4
TCRBV7S3A2A0A539 MIR652-201ENST00000385278 98 ntBASIC0.05□□□□□ -2.4
TCRBV7S3A2A0A539 RNU6-402P-201ENST00000410678 103 ntBASIC0.05□□□□□ -2.4
TCRBV7S3A2A0A539 RNU7-24P-201ENST00000458867 62 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 215.1 ms