Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 RNU7-6P-201ENST00000516845 62 ntBASIC-1.42□□□□□ -2.64
VAPAQ9P0L0 MIR6874-201ENST00000635894 71 ntBASIC-1.42□□□□□ -2.64
VAPAQ9P0L0 U6.96-201ENST00000636425 70 ntBASIC-1.42□□□□□ -2.64
VAPAQ9P0L0 MIR4320-201ENST00000636981 65 ntBASIC-1.42□□□□□ -2.64
VAPAQ9P0L0 SNORD115-22-201ENST00000364456 82 ntBASIC-1.43□□□□□ -2.64
VAPAQ9P0L0 Y_RNA.277-201ENST00000364754 102 ntBASIC-1.43□□□□□ -2.64
VAPAQ9P0L0 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.43□□□□□ -2.64
VAPAQ9P0L0 RNU6-576P-201ENST00000390854 102 ntBASIC-1.43□□□□□ -2.64
VAPAQ9P0L0 RNU6-466P-201ENST00000391224 103 ntBASIC-1.43□□□□□ -2.64
VAPAQ9P0L0 Y_RNA.651-201ENST00000459380 103 ntBASIC-1.43□□□□□ -2.64
VAPAQ9P0L0 MTND1P19-201ENST00000511780 315 ntBASIC-1.43□□□□□ -2.64
VAPAQ9P0L0 AC021146.9-201ENST00000512503 156 ntBASIC-1.43□□□□□ -2.64
VAPAQ9P0L0 MIR5591-201ENST00000578248 65 ntBASIC-1.43□□□□□ -2.64
VAPAQ9P0L0 AC091912.2-201ENST00000624798 167 ntBASIC-1.43□□□□□ -2.64
VAPAQ9P0L0 RNA5SP26-201ENST00000362406 119 ntBASIC-1.44□□□□□ -2.64
VAPAQ9P0L0 SNORD18B-201ENST00000365659 72 ntBASIC-1.44□□□□□ -2.64
VAPAQ9P0L0 MT-TI-201ENST00000387365 69 ntBASIC-1.44□□□□□ -2.64
VAPAQ9P0L0 MT-TD-201ENST00000387419 68 ntBASIC-1.44□□□□□ -2.64
VAPAQ9P0L0 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.44□□□□□ -2.64
VAPAQ9P0L0 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.44□□□□□ -2.64
VAPAQ9P0L0 AC026421.1-201ENST00000519101 163 ntBASIC-1.44□□□□□ -2.64
VAPAQ9P0L0 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.44□□□□□ -2.64
VAPAQ9P0L0 MIR1255B1-201ENST00000636325 63 ntBASIC-1.44□□□□□ -2.64
VAPAQ9P0L0 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.45□□□□□ -2.64
VAPAQ9P0L0 RNU6-226P-201ENST00000363778 107 ntBASIC-1.45□□□□□ -2.64
VAPAQ9P0L0 AC138207.3-201ENST00000585289 166 ntBASIC-1.45□□□□□ -2.64
VAPAQ9P0L0 Y_RNA.804-201ENST00000615262 101 ntBASIC-1.45□□□□□ -2.64
VAPAQ9P0L0 AL137067.1-201ENST00000615933 120 ntBASIC-1.45□□□□□ -2.64
VAPAQ9P0L0 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.45□□□□□ -2.64
VAPAQ9P0L0 U6.106-201ENST00000636360 105 ntBASIC-1.45□□□□□ -2.64
VAPAQ9P0L0 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.46□□□□□ -2.64
VAPAQ9P0L0 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.46□□□□□ -2.64
VAPAQ9P0L0 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.46□□□□□ -2.64
VAPAQ9P0L0 Y_RNA.512-201ENST00000384518 102 ntBASIC-1.46□□□□□ -2.64
VAPAQ9P0L0 MIR29B1-201ENST00000385015 81 ntBASIC-1.46□□□□□ -2.64
VAPAQ9P0L0 SNORA26.4-201ENST00000391188 123 ntBASIC-1.46□□□□□ -2.64
VAPAQ9P0L0 SNORA75.5-201ENST00000391291 81 ntBASIC-1.46□□□□□ -2.64
VAPAQ9P0L0 MIR548H3-201ENST00000408771 118 ntBASIC-1.46□□□□□ -2.64
VAPAQ9P0L0 RNU6-75P-201ENST00000515944 104 ntBASIC-1.46□□□□□ -2.64
VAPAQ9P0L0 AC108081.1-201ENST00000604358 221 ntBASIC-1.46□□□□□ -2.64
VAPAQ9P0L0 MTND4P29-201ENST00000503122 1372 ntBASIC-1.47□□□□□ -2.64
VAPAQ9P0L0 RNU4-32P-201ENST00000363404 141 ntBASIC-1.47□□□□□ -2.64
VAPAQ9P0L0 Y_RNA.352-201ENST00000365439 102 ntBASIC-1.47□□□□□ -2.64
VAPAQ9P0L0 MIR548G-201ENST00000408442 89 ntBASIC-1.47□□□□□ -2.64
VAPAQ9P0L0 SNORA7.5-201ENST00000410672 110 ntBASIC-1.47□□□□□ -2.64
VAPAQ9P0L0 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.47□□□□□ -2.64
VAPAQ9P0L0 SNORD57-201ENST00000448188 72 ntBASIC-1.47□□□□□ -2.64
VAPAQ9P0L0 RNU6-1137P-201ENST00000517073 99 ntBASIC-1.47□□□□□ -2.64
VAPAQ9P0L0 MIR3140-201ENST00000583685 90 ntBASIC-1.47□□□□□ -2.64
VAPAQ9P0L0 RNU6-309P-201ENST00000364573 106 ntBASIC-1.48□□□□□ -2.65
VAPAQ9P0L0 Y_RNA.584-201ENST00000391090 114 ntBASIC-1.48□□□□□ -2.65
VAPAQ9P0L0 MIR1302-6-201ENST00000408466 90 ntBASIC-1.48□□□□□ -2.65
VAPAQ9P0L0 RNU6-412P-201ENST00000516434 106 ntBASIC-1.48□□□□□ -2.65
VAPAQ9P0L0 RNU6-90P-201ENST00000606352 106 ntBASIC-1.48□□□□□ -2.65
VAPAQ9P0L0 U6.104-201ENST00000637979 90 ntBASIC-1.48□□□□□ -2.65
VAPAQ9P0L0 Y_RNA.75-201ENST00000362927 97 ntBASIC-1.49□□□□□ -2.65
VAPAQ9P0L0 RNU6-495P-201ENST00000362995 107 ntBASIC-1.49□□□□□ -2.65
VAPAQ9P0L0 SNORA2.1-201ENST00000363089 137 ntBASIC-1.49□□□□□ -2.65
VAPAQ9P0L0 SNORD115-33-201ENST00000363723 82 ntBASIC-1.49□□□□□ -2.65
VAPAQ9P0L0 RNY4P28-201ENST00000365281 93 ntBASIC-1.49□□□□□ -2.65
VAPAQ9P0L0 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.49□□□□□ -2.65
VAPAQ9P0L0 MIR507-201ENST00000385234 94 ntBASIC-1.49□□□□□ -2.65
VAPAQ9P0L0 MT-TW-201ENST00000387382 68 ntBASIC-1.49□□□□□ -2.65
VAPAQ9P0L0 U3.27-201ENST00000391237 200 ntBASIC-1.49□□□□□ -2.65
VAPAQ9P0L0 MIR1255B2-201ENST00000408618 67 ntBASIC-1.49□□□□□ -2.65
VAPAQ9P0L0 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.49□□□□□ -2.65
VAPAQ9P0L0 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.49□□□□□ -2.65
VAPAQ9P0L0 MIR3149-201ENST00000584629 83 ntBASIC-1.49□□□□□ -2.65
VAPAQ9P0L0 MIR6502-201ENST00000617296 76 ntBASIC-1.49□□□□□ -2.65
VAPAQ9P0L0 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.49□□□□□ -2.65
VAPAQ9P0L0 MIR6844-201ENST00000637122 62 ntBASIC-1.49□□□□□ -2.65
VAPAQ9P0L0 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.5□□□□□ -2.65
VAPAQ9P0L0 Y_RNA.216-201ENST00000364205 93 ntBASIC-1.5□□□□□ -2.65
VAPAQ9P0L0 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.5□□□□□ -2.65
VAPAQ9P0L0 RNA5SP147-201ENST00000516493 109 ntBASIC-1.5□□□□□ -2.65
VAPAQ9P0L0 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.5□□□□□ -2.65
VAPAQ9P0L0 AC134503.1-201ENST00000633048 54 ntBASIC-1.5□□□□□ -2.65
VAPAQ9P0L0 RNU6-924P-201ENST00000362926 108 ntBASIC-1.51□□□□□ -2.65
VAPAQ9P0L0 SNORD115-19-201ENST00000363098 82 ntBASIC-1.51□□□□□ -2.65
VAPAQ9P0L0 SNORD115-18-201ENST00000363293 82 ntBASIC-1.51□□□□□ -2.65
VAPAQ9P0L0 SNORD115-17-201ENST00000364612 82 ntBASIC-1.51□□□□□ -2.65
VAPAQ9P0L0 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.51□□□□□ -2.65
VAPAQ9P0L0 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.51□□□□□ -2.65
VAPAQ9P0L0 AC022028.1-201ENST00000412054 408 ntBASIC-1.51□□□□□ -2.65
VAPAQ9P0L0 AP002795.1-201ENST00000534879 84 ntBASIC-1.51□□□□□ -2.65
VAPAQ9P0L0 AL512310.12-203ENST00000640543 90 ntBASIC-1.51□□□□□ -2.65
VAPAQ9P0L0 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.52□□□□□ -2.65
VAPAQ9P0L0 SNORA33.1-201ENST00000364957 130 ntBASIC-1.52□□□□□ -2.65
VAPAQ9P0L0 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.52□□□□□ -2.65
VAPAQ9P0L0 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.52□□□□□ -2.65
VAPAQ9P0L0 Y_RNA.461-201ENST00000384263 103 ntBASIC-1.52□□□□□ -2.65
VAPAQ9P0L0 MIR548P-201ENST00000408336 84 ntBASIC-1.52□□□□□ -2.65
VAPAQ9P0L0 RNU6-985P-201ENST00000410182 104 ntBASIC-1.52□□□□□ -2.65
VAPAQ9P0L0 RPL35AP4-201ENST00000412007 102 ntBASIC-1.52□□□□□ -2.65
VAPAQ9P0L0 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.52□□□□□ -2.65
VAPAQ9P0L0 AC107027.2-201ENST00000512197 115 ntBASIC-1.52□□□□□ -2.65
VAPAQ9P0L0 RNA5SP461-201ENST00000516451 104 ntBASIC-1.52□□□□□ -2.65
VAPAQ9P0L0 AL160413.1-201ENST00000622780 310 ntBASIC-1.52□□□□□ -2.65
VAPAQ9P0L0 AC021753.1-201ENST00000635724 168 ntBASIC-1.52□□□□□ -2.65
VAPAQ9P0L0 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.53□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 209.7 ms