Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 RPS29P1-201ENST00000465274 159 ntBASIC1.33□□□□□ -2.2
BCAS3Q9H6U6 RNU6-977P-201ENST00000516411 103 ntBASIC1.33□□□□□ -2.2
BCAS3Q9H6U6 MIR4696-201ENST00000581431 70 ntBASIC1.33□□□□□ -2.2
BCAS3Q9H6U6 AC145423.2-201ENST00000610631 239 ntBASIC1.33□□□□□ -2.2
BCAS3Q9H6U6 RNA5SP327-201ENST00000362494 101 ntBASIC1.32□□□□□ -2.2
BCAS3Q9H6U6 SNORA25-201ENST00000384384 134 ntBASIC1.32□□□□□ -2.2
BCAS3Q9H6U6 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
BCAS3Q9H6U6 Y_RNA.596-201ENST00000410462 109 ntBASIC1.32□□□□□ -2.2
BCAS3Q9H6U6 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.32□□□□□ -2.2
BCAS3Q9H6U6 uc_338.16-201ENST00000621804 95 ntBASIC1.32□□□□□ -2.2
BCAS3Q9H6U6 RNU6-1229P-201ENST00000364295 107 ntBASIC1.31□□□□□ -2.2
BCAS3Q9H6U6 Y_RNA.239-201ENST00000364444 113 ntBASIC1.31□□□□□ -2.2
BCAS3Q9H6U6 SNORD101-201ENST00000384027 73 ntBASIC1.31□□□□□ -2.2
BCAS3Q9H6U6 MIR100-201ENST00000385259 80 ntBASIC1.31□□□□□ -2.2
BCAS3Q9H6U6 AC067940.1-201ENST00000458411 300 ntBASIC1.31□□□□□ -2.2
BCAS3Q9H6U6 U6.100-201ENST00000636230 99 ntBASIC1.31□□□□□ -2.2
BCAS3Q9H6U6 Y_RNA.205-201ENST00000364128 113 ntBASIC1.3□□□□□ -2.2
BCAS3Q9H6U6 MIR222-201ENST00000384992 110 ntBASIC1.3□□□□□ -2.2
BCAS3Q9H6U6 SNORD77.2-201ENST00000391045 68 ntBASIC1.3□□□□□ -2.2
BCAS3Q9H6U6 MIR548J-201ENST00000408833 112 ntBASIC1.3□□□□□ -2.2
BCAS3Q9H6U6 RNU6-380P-201ENST00000410207 107 ntBASIC1.3□□□□□ -2.2
BCAS3Q9H6U6 RNU6-1110P-201ENST00000516462 101 ntBASIC1.3□□□□□ -2.2
BCAS3Q9H6U6 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
BCAS3Q9H6U6 SNORD115-44-201ENST00000365391 82 ntBASIC1.29□□□□□ -2.2
BCAS3Q9H6U6 SNORD26-201ENST00000384147 75 ntBASIC1.29□□□□□ -2.2
BCAS3Q9H6U6 RNU6-1051P-201ENST00000365471 102 ntBASIC1.28□□□□□ -2.2
BCAS3Q9H6U6 MIR150-201ENST00000385048 84 ntBASIC1.28□□□□□ -2.2
BCAS3Q9H6U6 RNU6-935P-201ENST00000410371 100 ntBASIC1.28□□□□□ -2.2
BCAS3Q9H6U6 AL136317.1-201ENST00000612653 226 ntBASIC1.28□□□□□ -2.2
BCAS3Q9H6U6 U7.4-201ENST00000614961 63 ntBASIC1.28□□□□□ -2.2
BCAS3Q9H6U6 Y_RNA.32-201ENST00000362589 110 ntBASIC1.27□□□□□ -2.21
BCAS3Q9H6U6 RNU6-161P-201ENST00000363051 106 ntBASIC1.27□□□□□ -2.21
BCAS3Q9H6U6 RNA5SP403-201ENST00000363598 108 ntBASIC1.27□□□□□ -2.21
BCAS3Q9H6U6 RNY4P3-201ENST00000365254 95 ntBASIC1.27□□□□□ -2.21
BCAS3Q9H6U6 MIR520F-201ENST00000384824 87 ntBASIC1.27□□□□□ -2.21
BCAS3Q9H6U6 FABP5P4-201ENST00000437203 171 ntBASIC1.27□□□□□ -2.21
BCAS3Q9H6U6 U7.7-201ENST00000459276 60 ntBASIC1.27□□□□□ -2.21
BCAS3Q9H6U6 SNORA31.14-201ENST00000516728 116 ntBASIC1.27□□□□□ -2.21
BCAS3Q9H6U6 RNU6-135P-201ENST00000516769 101 ntBASIC1.27□□□□□ -2.21
BCAS3Q9H6U6 MIR1297-201ENST00000637311 77 ntBASIC1.27□□□□□ -2.21
BCAS3Q9H6U6 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
BCAS3Q9H6U6 RNU6-208P-201ENST00000362431 107 ntBASIC1.26□□□□□ -2.21
BCAS3Q9H6U6 SNORD90-201ENST00000391145 111 ntBASIC1.26□□□□□ -2.21
BCAS3Q9H6U6 AC074348.1-201ENST00000426503 132 ntBASIC1.26□□□□□ -2.21
BCAS3Q9H6U6 Y_RNA.207-201ENST00000364142 106 ntBASIC1.25□□□□□ -2.21
BCAS3Q9H6U6 Y_RNA.374-201ENST00000365606 101 ntBASIC1.25□□□□□ -2.21
BCAS3Q9H6U6 SNORA24B-201ENST00000384176 131 ntBASIC1.25□□□□□ -2.21
BCAS3Q9H6U6 MIR200A-201ENST00000384875 90 ntBASIC1.25□□□□□ -2.21
BCAS3Q9H6U6 U3.27-201ENST00000391237 200 ntBASIC1.25□□□□□ -2.21
BCAS3Q9H6U6 RNU6-955P-201ENST00000410497 104 ntBASIC1.25□□□□□ -2.21
BCAS3Q9H6U6 AC087343.1-201ENST00000477341 475 ntBASIC1.25□□□□□ -2.21
BCAS3Q9H6U6 AC002350.1-201ENST00000490759 375 ntBASIC1.25□□□□□ -2.21
BCAS3Q9H6U6 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.25□□□□□ -2.21
BCAS3Q9H6U6 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.25□□□□□ -2.21
BCAS3Q9H6U6 RNU5F-1-201ENST00000362507 117 ntBASIC1.24□□□□□ -2.21
BCAS3Q9H6U6 RNU1-124P-201ENST00000363861 145 ntBASIC1.24□□□□□ -2.21
BCAS3Q9H6U6 Y_RNA.532-201ENST00000384590 113 ntBASIC1.24□□□□□ -2.21
BCAS3Q9H6U6 RNU6-1108P-201ENST00000516308 104 ntBASIC1.24□□□□□ -2.21
BCAS3Q9H6U6 RNU6-303P-201ENST00000517091 106 ntBASIC1.24□□□□□ -2.21
BCAS3Q9H6U6 MIR4295-201ENST00000585286 85 ntBASIC1.24□□□□□ -2.21
BCAS3Q9H6U6 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
BCAS3Q9H6U6 YWHAEP2-201ENST00000580066 112 ntBASIC1.23□□□□□ -2.21
BCAS3Q9H6U6 YWHAEP3-201ENST00000582767 121 ntBASIC1.23□□□□□ -2.21
BCAS3Q9H6U6 SNORD114-21-201ENST00000606412 72 ntBASIC1.23□□□□□ -2.21
BCAS3Q9H6U6 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.22□□□□□ -2.21
BCAS3Q9H6U6 RNU2-59P-201ENST00000410482 191 ntBASIC1.22□□□□□ -2.21
BCAS3Q9H6U6 Y_RNA.606-201ENST00000410579 103 ntBASIC1.22□□□□□ -2.21
BCAS3Q9H6U6 snoU13.17-201ENST00000458802 104 ntBASIC1.22□□□□□ -2.21
BCAS3Q9H6U6 RNU6-807P-201ENST00000516805 107 ntBASIC1.22□□□□□ -2.21
BCAS3Q9H6U6 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.22□□□□□ -2.21
BCAS3Q9H6U6 Y_RNA.545-201ENST00000384652 105 ntBASIC1.21□□□□□ -2.22
BCAS3Q9H6U6 SNORD105-201ENST00000386910 85 ntBASIC1.21□□□□□ -2.22
BCAS3Q9H6U6 RNU6-523P-201ENST00000516304 54 ntBASIC1.21□□□□□ -2.22
BCAS3Q9H6U6 RNU7-161P-201ENST00000517289 62 ntBASIC1.21□□□□□ -2.22
BCAS3Q9H6U6 RN7SL793P-201ENST00000583259 296 ntBASIC1.21□□□□□ -2.22
BCAS3Q9H6U6 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
BCAS3Q9H6U6 MIR373-201ENST00000362273 69 ntBASIC1.2□□□□□ -2.22
BCAS3Q9H6U6 SNORD89-201ENST00000390981 114 ntBASIC1.2□□□□□ -2.22
BCAS3Q9H6U6 AC073261.1-201ENST00000429409 121 ntBASIC1.2□□□□□ -2.22
BCAS3Q9H6U6 RNU6-287P-201ENST00000516230 98 ntBASIC1.2□□□□□ -2.22
BCAS3Q9H6U6 MIR3920-201ENST00000581751 86 ntBASIC1.2□□□□□ -2.22
BCAS3Q9H6U6 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.2□□□□□ -2.22
BCAS3Q9H6U6 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
BCAS3Q9H6U6 SNORD115-24-201ENST00000363528 82 ntBASIC1.19□□□□□ -2.22
BCAS3Q9H6U6 RNU6-1126P-201ENST00000384002 107 ntBASIC1.19□□□□□ -2.22
BCAS3Q9H6U6 MIR216B-201ENST00000390186 82 ntBASIC1.19□□□□□ -2.22
BCAS3Q9H6U6 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
BCAS3Q9H6U6 SCARNA18B-201ENST00000458806 135 ntBASIC1.19□□□□□ -2.22
BCAS3Q9H6U6 SNORD124-201ENST00000459577 104 ntBASIC1.19□□□□□ -2.22
BCAS3Q9H6U6 AC097510.1-201ENST00000510945 133 ntBASIC1.19□□□□□ -2.22
BCAS3Q9H6U6 RNU7-13P-201ENST00000516413 62 ntBASIC1.19□□□□□ -2.22
BCAS3Q9H6U6 MIR4639-201ENST00000584938 69 ntBASIC1.19□□□□□ -2.22
BCAS3Q9H6U6 Y_RNA.12-201ENST00000362393 112 ntBASIC1.18□□□□□ -2.22
BCAS3Q9H6U6 MIR451A-201ENST00000385059 72 ntBASIC1.18□□□□□ -2.22
BCAS3Q9H6U6 MIR5000-201ENST00000577717 103 ntBASIC1.18□□□□□ -2.22
BCAS3Q9H6U6 AC025627.3-201ENST00000582078 182 ntBASIC1.18□□□□□ -2.22
BCAS3Q9H6U6 Y_RNA.788-201ENST00000622394 112 ntBASIC1.18□□□□□ -2.22
BCAS3Q9H6U6 RNU6-340P-201ENST00000364005 107 ntBASIC1.17□□□□□ -2.22
BCAS3Q9H6U6 RNA5SP117-201ENST00000365294 118 ntBASIC1.17□□□□□ -2.22
BCAS3Q9H6U6 MIR617-201ENST00000385030 97 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 238.3 ms