Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 AC062037.1-201ENST00000605302 128 ntBASIC0.75□□□□□ -2.29
CDT1Q9H211 MIR8087-201ENST00000612745 78 ntBASIC0.75□□□□□ -2.29
CDT1Q9H211 Y_RNA.73-201ENST00000362910 113 ntBASIC0.74□□□□□ -2.29
CDT1Q9H211 RNA5SP62-201ENST00000363457 110 ntBASIC0.74□□□□□ -2.29
CDT1Q9H211 Y_RNA.283-201ENST00000364798 112 ntBASIC0.74□□□□□ -2.29
CDT1Q9H211 RNA5SP117-201ENST00000365294 118 ntBASIC0.74□□□□□ -2.29
CDT1Q9H211 RNU6-132P-201ENST00000383863 107 ntBASIC0.74□□□□□ -2.29
CDT1Q9H211 Y_RNA.388-201ENST00000383919 113 ntBASIC0.74□□□□□ -2.29
CDT1Q9H211 Y_RNA.620-201ENST00000411009 88 ntBASIC0.74□□□□□ -2.29
CDT1Q9H211 RNA5SP222-201ENST00000411039 105 ntBASIC0.74□□□□□ -2.29
CDT1Q9H211 Y_RNA.648-201ENST00000459455 110 ntBASIC0.74□□□□□ -2.29
CDT1Q9H211 RNU7-153P-201ENST00000516455 62 ntBASIC0.74□□□□□ -2.29
CDT1Q9H211 AC006254.2-201ENST00000603259 279 ntBASIC0.74□□□□□ -2.29
CDT1Q9H211 MIR18A-201ENST00000362310 71 ntBASIC0.73□□□□□ -2.29
CDT1Q9H211 SNORD115-24-201ENST00000363528 82 ntBASIC0.73□□□□□ -2.29
CDT1Q9H211 RNU6-1134P-201ENST00000365156 101 ntBASIC0.73□□□□□ -2.29
CDT1Q9H211 RNU6-497P-201ENST00000365316 104 ntBASIC0.73□□□□□ -2.29
CDT1Q9H211 RNU6-716P-201ENST00000365621 103 ntBASIC0.73□□□□□ -2.29
CDT1Q9H211 AC097635.1-201ENST00000450678 155 ntBASIC0.73□□□□□ -2.29
CDT1Q9H211 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.73□□□□□ -2.29
CDT1Q9H211 RNA5SP121-201ENST00000516537 101 ntBASIC0.73□□□□□ -2.29
CDT1Q9H211 TRDV1-202ENST00000621643 102 ntBASIC0.73□□□□□ -2.29
CDT1Q9H211 U6.100-201ENST00000636230 99 ntBASIC0.73□□□□□ -2.29
CDT1Q9H211 MIR494-201ENST00000349529 81 ntBASIC0.72□□□□□ -2.29
CDT1Q9H211 Y_RNA.96-201ENST00000363092 109 ntBASIC0.72□□□□□ -2.29
CDT1Q9H211 RNA5SP403-201ENST00000363598 108 ntBASIC0.72□□□□□ -2.29
CDT1Q9H211 SNORD18A-201ENST00000363753 72 ntBASIC0.72□□□□□ -2.29
CDT1Q9H211 SNORD90-201ENST00000391145 111 ntBASIC0.72□□□□□ -2.29
CDT1Q9H211 MIR936-201ENST00000401264 98 ntBASIC0.72□□□□□ -2.29
CDT1Q9H211 RNU6-519P-201ENST00000410590 108 ntBASIC0.72□□□□□ -2.29
CDT1Q9H211 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.72□□□□□ -2.29
CDT1Q9H211 RNU7-10P-201ENST00000607194 63 ntBASIC0.72□□□□□ -2.29
CDT1Q9H211 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.72□□□□□ -2.29
CDT1Q9H211 MIR330-201ENST00000362196 94 ntBASIC0.71□□□□□ -2.3
CDT1Q9H211 MIRLET7F1-201ENST00000362202 87 ntBASIC0.71□□□□□ -2.3
CDT1Q9H211 SNORA36.1-201ENST00000363424 132 ntBASIC0.71□□□□□ -2.3
CDT1Q9H211 SNORD116-22-201ENST00000384430 92 ntBASIC0.71□□□□□ -2.3
CDT1Q9H211 SNORD28-201ENST00000384706 75 ntBASIC0.71□□□□□ -2.3
CDT1Q9H211 MIR146A-201ENST00000385201 99 ntBASIC0.71□□□□□ -2.3
CDT1Q9H211 RNA5SP292-201ENST00000390974 118 ntBASIC0.71□□□□□ -2.3
CDT1Q9H211 RNU6-592P-201ENST00000411333 103 ntBASIC0.71□□□□□ -2.3
CDT1Q9H211 RNU6-1265P-201ENST00000516342 103 ntBASIC0.71□□□□□ -2.3
CDT1Q9H211 MIR4536-1-201ENST00000583537 88 ntBASIC0.71□□□□□ -2.3
CDT1Q9H211 AC244669.1-204ENST00000621564 178 ntBASIC0.71□□□□□ -2.3
CDT1Q9H211 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.71□□□□□ -2.3
CDT1Q9H211 Y_RNA.174-201ENST00000363781 105 ntBASIC0.7□□□□□ -2.3
CDT1Q9H211 RNU6-675P-201ENST00000384236 104 ntBASIC0.7□□□□□ -2.3
CDT1Q9H211 MIR548AG2-201ENST00000581228 64 ntBASIC0.7□□□□□ -2.3
CDT1Q9H211 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
CDT1Q9H211 RNU6-633P-201ENST00000362612 103 ntBASIC0.69□□□□□ -2.3
CDT1Q9H211 RNU4-32P-201ENST00000363404 141 ntBASIC0.69□□□□□ -2.3
CDT1Q9H211 SNORA36.2-201ENST00000384004 127 ntBASIC0.69□□□□□ -2.3
CDT1Q9H211 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.69□□□□□ -2.3
CDT1Q9H211 RNY4P29-201ENST00000410801 97 ntBASIC0.69□□□□□ -2.3
CDT1Q9H211 MIR4696-201ENST00000581431 70 ntBASIC0.69□□□□□ -2.3
CDT1Q9H211 RNA5SP347-201ENST00000362445 119 ntBASIC0.68□□□□□ -2.3
CDT1Q9H211 RNU6-110P-201ENST00000384508 104 ntBASIC0.68□□□□□ -2.3
CDT1Q9H211 RNA5SP47-201ENST00000517230 109 ntBASIC0.68□□□□□ -2.3
CDT1Q9H211 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.68□□□□□ -2.3
CDT1Q9H211 MIR3064-201ENST00000581130 66 ntBASIC0.68□□□□□ -2.3
CDT1Q9H211 MIR3920-201ENST00000581751 86 ntBASIC0.68□□□□□ -2.3
CDT1Q9H211 MTRNR2L2-201ENST00000604882 87 ntBASIC0.68□□□□□ -2.3
CDT1Q9H211 MIR548BB-201ENST00000626714 66 ntBASIC0.68□□□□□ -2.3
CDT1Q9H211 RNU6-509P-201ENST00000363519 107 ntBASIC0.67□□□□□ -2.3
CDT1Q9H211 Y_RNA.258-201ENST00000364613 105 ntBASIC0.67□□□□□ -2.3
CDT1Q9H211 RNU6-573P-201ENST00000383938 106 ntBASIC0.67□□□□□ -2.3
CDT1Q9H211 Y_RNA.558-201ENST00000384685 113 ntBASIC0.67□□□□□ -2.3
CDT1Q9H211 MIR450A2-201ENST00000385022 100 ntBASIC0.67□□□□□ -2.3
CDT1Q9H211 RNU6-466P-201ENST00000391224 103 ntBASIC0.67□□□□□ -2.3
CDT1Q9H211 RNU7-104P-201ENST00000459398 79 ntBASIC0.67□□□□□ -2.3
CDT1Q9H211 RNU6-65P-201ENST00000516332 98 ntBASIC0.67□□□□□ -2.3
CDT1Q9H211 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
CDT1Q9H211 Y_RNA.207-201ENST00000364142 106 ntBASIC0.66□□□□□ -2.3
CDT1Q9H211 RNY1P1-201ENST00000364372 112 ntBASIC0.66□□□□□ -2.3
CDT1Q9H211 RNU6-287P-201ENST00000516230 98 ntBASIC0.66□□□□□ -2.3
CDT1Q9H211 SNORA18.5-201ENST00000516616 101 ntBASIC0.66□□□□□ -2.3
CDT1Q9H211 RNA5SP94-201ENST00000516917 108 ntBASIC0.66□□□□□ -2.3
CDT1Q9H211 IGLL4P-201ENST00000614590 133 ntBASIC0.66□□□□□ -2.3
CDT1Q9H211 RNU6-664P-201ENST00000362381 107 ntBASIC0.65□□□□□ -2.31
CDT1Q9H211 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
CDT1Q9H211 Y_RNA.611-201ENST00000410682 108 ntBASIC0.65□□□□□ -2.31
CDT1Q9H211 AC022137.1-201ENST00000483735 151 ntBASIC0.65□□□□□ -2.31
CDT1Q9H211 MIR4639-201ENST00000584938 69 ntBASIC0.65□□□□□ -2.31
CDT1Q9H211 RNA5SP499-201ENST00000363982 119 ntBASIC0.64□□□□□ -2.31
CDT1Q9H211 RNU6-726P-201ENST00000364680 107 ntBASIC0.64□□□□□ -2.31
CDT1Q9H211 RNA5SP173-201ENST00000364857 136 ntBASIC0.64□□□□□ -2.31
CDT1Q9H211 RNU4-45P-201ENST00000365469 141 ntBASIC0.64□□□□□ -2.31
CDT1Q9H211 RNU6-979P-201ENST00000383896 107 ntBASIC0.64□□□□□ -2.31
CDT1Q9H211 RN7SKP12-201ENST00000516275 143 ntBASIC0.64□□□□□ -2.31
CDT1Q9H211 MIR4711-201ENST00000578274 70 ntBASIC0.64□□□□□ -2.31
CDT1Q9H211 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.64□□□□□ -2.31
CDT1Q9H211 MIR3140-201ENST00000583685 90 ntBASIC0.64□□□□□ -2.31
CDT1Q9H211 MIR5087-201ENST00000635826 76 ntBASIC0.64□□□□□ -2.31
CDT1Q9H211 AC006160.2-201ENST00000637708 154 ntBASIC0.64□□□□□ -2.31
CDT1Q9H211 RNA5SP517-201ENST00000364724 117 ntBASIC0.63□□□□□ -2.31
CDT1Q9H211 SNORD101-201ENST00000384027 73 ntBASIC0.63□□□□□ -2.31
CDT1Q9H211 RNU6-787P-201ENST00000384032 107 ntBASIC0.63□□□□□ -2.31
CDT1Q9H211 RNU6-1152P-201ENST00000384576 107 ntBASIC0.63□□□□□ -2.31
CDT1Q9H211 MIR140-201ENST00000385282 100 ntBASIC0.63□□□□□ -2.31
CDT1Q9H211 SNORA26.2-201ENST00000390922 122 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 223.9 ms