Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 Y_RNA.681-201ENST00000516445 113 ntBASIC1.47□□□□□ -2.17
TRIM56Q9BRZ2 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
TRIM56Q9BRZ2 RNU6-681P-201ENST00000364012 104 ntBASIC1.46□□□□□ -2.18
TRIM56Q9BRZ2 SNORA25.8-201ENST00000364831 128 ntBASIC1.46□□□□□ -2.18
TRIM56Q9BRZ2 MIR4484-201ENST00000582855 83 ntBASIC1.46□□□□□ -2.18
TRIM56Q9BRZ2 Y_RNA.788-201ENST00000622394 112 ntBASIC1.46□□□□□ -2.18
TRIM56Q9BRZ2 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
TRIM56Q9BRZ2 RNA5SP117-201ENST00000365294 118 ntBASIC1.45□□□□□ -2.18
TRIM56Q9BRZ2 Y_RNA.532-201ENST00000384590 113 ntBASIC1.45□□□□□ -2.18
TRIM56Q9BRZ2 SNORA67.6-201ENST00000391093 99 ntBASIC1.45□□□□□ -2.18
TRIM56Q9BRZ2 U3.27-201ENST00000391237 200 ntBASIC1.45□□□□□ -2.18
TRIM56Q9BRZ2 AC074348.1-201ENST00000426503 132 ntBASIC1.45□□□□□ -2.18
TRIM56Q9BRZ2 snoU13.17-201ENST00000458802 104 ntBASIC1.45□□□□□ -2.18
TRIM56Q9BRZ2 RNA5SP403-201ENST00000363598 108 ntBASIC1.44□□□□□ -2.18
TRIM56Q9BRZ2 RNU6-392P-201ENST00000364926 101 ntBASIC1.44□□□□□ -2.18
TRIM56Q9BRZ2 Y_RNA.327-201ENST00000365201 102 ntBASIC1.44□□□□□ -2.18
TRIM56Q9BRZ2 SNORD89-201ENST00000390981 114 ntBASIC1.44□□□□□ -2.18
TRIM56Q9BRZ2 RNU2-59P-201ENST00000410482 191 ntBASIC1.44□□□□□ -2.18
TRIM56Q9BRZ2 RNU6-287P-201ENST00000516230 98 ntBASIC1.44□□□□□ -2.18
TRIM56Q9BRZ2 AC025627.3-201ENST00000582078 182 ntBASIC1.44□□□□□ -2.18
TRIM56Q9BRZ2 MIR3140-201ENST00000583685 90 ntBASIC1.44□□□□□ -2.18
TRIM56Q9BRZ2 MIR7974-201ENST00000615835 79 ntBASIC1.44□□□□□ -2.18
TRIM56Q9BRZ2 Y_RNA.224-201ENST00000364308 111 ntBASIC1.43□□□□□ -2.18
TRIM56Q9BRZ2 SNORD114-24-201ENST00000365029 72 ntBASIC1.43□□□□□ -2.18
TRIM56Q9BRZ2 MIR216B-201ENST00000390186 82 ntBASIC1.43□□□□□ -2.18
TRIM56Q9BRZ2 AC002350.1-201ENST00000490759 375 ntBASIC1.43□□□□□ -2.18
TRIM56Q9BRZ2 AC097510.1-201ENST00000510945 133 ntBASIC1.43□□□□□ -2.18
TRIM56Q9BRZ2 RNU6-469P-201ENST00000516253 101 ntBASIC1.43□□□□□ -2.18
TRIM56Q9BRZ2 SNORA31.24-201ENST00000517232 57 ntBASIC1.43□□□□□ -2.18
TRIM56Q9BRZ2 MIR3134-201ENST00000579433 74 ntBASIC1.43□□□□□ -2.18
TRIM56Q9BRZ2 ZNF209P-201ENST00000593450 2304 ntBASIC1.42□□□□□ -2.18
TRIM56Q9BRZ2 MIR489-201ENST00000384923 84 ntBASIC1.42□□□□□ -2.18
TRIM56Q9BRZ2 MIR618-201ENST00000385287 98 ntBASIC1.42□□□□□ -2.18
TRIM56Q9BRZ2 SNORD105-201ENST00000386910 85 ntBASIC1.42□□□□□ -2.18
TRIM56Q9BRZ2 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
TRIM56Q9BRZ2 RNU6-871P-201ENST00000516122 100 ntBASIC1.42□□□□□ -2.18
TRIM56Q9BRZ2 RNA5SP404-201ENST00000517118 132 ntBASIC1.42□□□□□ -2.18
TRIM56Q9BRZ2 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.42□□□□□ -2.18
TRIM56Q9BRZ2 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
TRIM56Q9BRZ2 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
TRIM56Q9BRZ2 RNU6-340P-201ENST00000364005 107 ntBASIC1.41□□□□□ -2.18
TRIM56Q9BRZ2 Y_RNA.371-201ENST00000365591 113 ntBASIC1.41□□□□□ -2.18
TRIM56Q9BRZ2 MIR942-201ENST00000401111 86 ntBASIC1.41□□□□□ -2.18
TRIM56Q9BRZ2 MIR2113-201ENST00000459007 91 ntBASIC1.41□□□□□ -2.18
TRIM56Q9BRZ2 RNU7-104P-201ENST00000459398 79 ntBASIC1.41□□□□□ -2.18
TRIM56Q9BRZ2 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.41□□□□□ -2.18
TRIM56Q9BRZ2 RNU6-70P-201ENST00000516438 60 ntBASIC1.41□□□□□ -2.18
TRIM56Q9BRZ2 AC068338.1-201ENST00000565567 176 ntBASIC1.41□□□□□ -2.18
TRIM56Q9BRZ2 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.19
TRIM56Q9BRZ2 Y_RNA.36-201ENST00000362602 112 ntBASIC1.4□□□□□ -2.19
TRIM56Q9BRZ2 SNORA24B-201ENST00000384176 131 ntBASIC1.4□□□□□ -2.19
TRIM56Q9BRZ2 Y_RNA.606-201ENST00000410579 103 ntBASIC1.4□□□□□ -2.19
TRIM56Q9BRZ2 AC004223.1-201ENST00000479840 271 ntBASIC1.4□□□□□ -2.19
TRIM56Q9BRZ2 RNU7-161P-201ENST00000517289 62 ntBASIC1.4□□□□□ -2.19
TRIM56Q9BRZ2 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
TRIM56Q9BRZ2 RNU6-1126P-201ENST00000384002 107 ntBASIC1.39□□□□□ -2.19
TRIM56Q9BRZ2 RNU6-1052P-201ENST00000411398 104 ntBASIC1.39□□□□□ -2.19
TRIM56Q9BRZ2 AC139453.2-201ENST00000487255 133 ntBASIC1.39□□□□□ -2.19
TRIM56Q9BRZ2 RNU6-719P-201ENST00000516671 104 ntBASIC1.39□□□□□ -2.19
TRIM56Q9BRZ2 RNU1-92P-201ENST00000517017 135 ntBASIC1.39□□□□□ -2.19
TRIM56Q9BRZ2 MIR4421-201ENST00000578133 69 ntBASIC1.39□□□□□ -2.19
TRIM56Q9BRZ2 U6.81-201ENST00000612550 106 ntBASIC1.39□□□□□ -2.19
TRIM56Q9BRZ2 AC067863.3-201ENST00000624172 122 ntBASIC1.39□□□□□ -2.19
TRIM56Q9BRZ2 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
TRIM56Q9BRZ2 MIR26B-201ENST00000362251 77 ntBASIC1.38□□□□□ -2.19
TRIM56Q9BRZ2 SNORA7.1-201ENST00000363750 139 ntBASIC1.38□□□□□ -2.19
TRIM56Q9BRZ2 SNORA8.1-201ENST00000384250 140 ntBASIC1.38□□□□□ -2.19
TRIM56Q9BRZ2 MIR1276-201ENST00000408707 83 ntBASIC1.38□□□□□ -2.19
TRIM56Q9BRZ2 MIR3920-201ENST00000581751 86 ntBASIC1.38□□□□□ -2.19
TRIM56Q9BRZ2 MIR4639-201ENST00000584938 69 ntBASIC1.38□□□□□ -2.19
TRIM56Q9BRZ2 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.38□□□□□ -2.19
TRIM56Q9BRZ2 RNU6-154P-201ENST00000384306 106 ntBASIC1.37□□□□□ -2.19
TRIM56Q9BRZ2 MIR617-201ENST00000385030 97 ntBASIC1.37□□□□□ -2.19
TRIM56Q9BRZ2 RNU6-1177P-201ENST00000391058 104 ntBASIC1.37□□□□□ -2.19
TRIM56Q9BRZ2 RNU7-74P-201ENST00000459104 62 ntBASIC1.37□□□□□ -2.19
TRIM56Q9BRZ2 snoU13.18-201ENST00000459483 104 ntBASIC1.37□□□□□ -2.19
TRIM56Q9BRZ2 RNU6-523P-201ENST00000516304 54 ntBASIC1.37□□□□□ -2.19
TRIM56Q9BRZ2 SNORD124-201ENST00000459577 104 ntBASIC1.36□□□□□ -2.19
TRIM56Q9BRZ2 RNU6-1015P-201ENST00000517121 99 ntBASIC1.36□□□□□ -2.19
TRIM56Q9BRZ2 MIR644A-201ENST00000385262 94 ntBASIC1.35□□□□□ -2.19
TRIM56Q9BRZ2 MIR758-201ENST00000390227 88 ntBASIC1.35□□□□□ -2.19
TRIM56Q9BRZ2 RNU6-587P-201ENST00000391282 106 ntBASIC1.35□□□□□ -2.19
TRIM56Q9BRZ2 AC114801.3-201ENST00000510231 177 ntBASIC1.35□□□□□ -2.19
TRIM56Q9BRZ2 MIR6504-201ENST00000613520 61 ntBASIC1.35□□□□□ -2.19
TRIM56Q9BRZ2 RNU6-824P-201ENST00000363724 104 ntBASIC1.34□□□□□ -2.19
TRIM56Q9BRZ2 MIR573-201ENST00000384964 99 ntBASIC1.34□□□□□ -2.19
TRIM56Q9BRZ2 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
TRIM56Q9BRZ2 RNU1-123P-201ENST00000458950 160 ntBASIC1.34□□□□□ -2.19
TRIM56Q9BRZ2 RNA5SP255-201ENST00000516370 107 ntBASIC1.34□□□□□ -2.19
TRIM56Q9BRZ2 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.34□□□□□ -2.19
TRIM56Q9BRZ2 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
TRIM56Q9BRZ2 SNORD28-201ENST00000384706 75 ntBASIC1.33□□□□□ -2.2
TRIM56Q9BRZ2 RNU6-274P-201ENST00000459566 107 ntBASIC1.33□□□□□ -2.2
TRIM56Q9BRZ2 MIR548AG2-201ENST00000581228 64 ntBASIC1.33□□□□□ -2.2
TRIM56Q9BRZ2 AC244669.1-204ENST00000621564 178 ntBASIC1.33□□□□□ -2.2
TRIM56Q9BRZ2 MIR548L-201ENST00000408303 86 ntBASIC1.32□□□□□ -2.2
TRIM56Q9BRZ2 RNU6-752P-201ENST00000516376 102 ntBASIC1.32□□□□□ -2.2
TRIM56Q9BRZ2 RNU6-687P-201ENST00000516443 89 ntBASIC1.32□□□□□ -2.2
TRIM56Q9BRZ2 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
TRIM56Q9BRZ2 MIR154-201ENST00000385243 84 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 204.2 ms