Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 Y_RNA.681-201ENST00000516445 113 ntBASIC1.47□□□□□ -2.17
TRIM56Q9BRZ2 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
TRIM56Q9BRZ2 RNU6-681P-201ENST00000364012 104 ntBASIC1.46□□□□□ -2.18
TRIM56Q9BRZ2 SNORA25.8-201ENST00000364831 128 ntBASIC1.46□□□□□ -2.18
TRIM56Q9BRZ2 MIR4484-201ENST00000582855 83 ntBASIC1.46□□□□□ -2.18
TRIM56Q9BRZ2 Y_RNA.788-201ENST00000622394 112 ntBASIC1.46□□□□□ -2.18
TRIM56Q9BRZ2 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
TRIM56Q9BRZ2 RNA5SP117-201ENST00000365294 118 ntBASIC1.45□□□□□ -2.18
TRIM56Q9BRZ2 Y_RNA.532-201ENST00000384590 113 ntBASIC1.45□□□□□ -2.18
TRIM56Q9BRZ2 SNORA67.6-201ENST00000391093 99 ntBASIC1.45□□□□□ -2.18
TRIM56Q9BRZ2 U3.27-201ENST00000391237 200 ntBASIC1.45□□□□□ -2.18
TRIM56Q9BRZ2 AC074348.1-201ENST00000426503 132 ntBASIC1.45□□□□□ -2.18
TRIM56Q9BRZ2 snoU13.17-201ENST00000458802 104 ntBASIC1.45□□□□□ -2.18
TRIM56Q9BRZ2 RNA5SP403-201ENST00000363598 108 ntBASIC1.44□□□□□ -2.18
TRIM56Q9BRZ2 RNU6-392P-201ENST00000364926 101 ntBASIC1.44□□□□□ -2.18
TRIM56Q9BRZ2 Y_RNA.327-201ENST00000365201 102 ntBASIC1.44□□□□□ -2.18
TRIM56Q9BRZ2 SNORD89-201ENST00000390981 114 ntBASIC1.44□□□□□ -2.18
TRIM56Q9BRZ2 RNU2-59P-201ENST00000410482 191 ntBASIC1.44□□□□□ -2.18
TRIM56Q9BRZ2 RNU6-287P-201ENST00000516230 98 ntBASIC1.44□□□□□ -2.18
TRIM56Q9BRZ2 AC025627.3-201ENST00000582078 182 ntBASIC1.44□□□□□ -2.18
TRIM56Q9BRZ2 MIR3140-201ENST00000583685 90 ntBASIC1.44□□□□□ -2.18
TRIM56Q9BRZ2 MIR7974-201ENST00000615835 79 ntBASIC1.44□□□□□ -2.18
TRIM56Q9BRZ2 Y_RNA.224-201ENST00000364308 111 ntBASIC1.43□□□□□ -2.18
TRIM56Q9BRZ2 SNORD114-24-201ENST00000365029 72 ntBASIC1.43□□□□□ -2.18
TRIM56Q9BRZ2 MIR216B-201ENST00000390186 82 ntBASIC1.43□□□□□ -2.18
TRIM56Q9BRZ2 AC002350.1-201ENST00000490759 375 ntBASIC1.43□□□□□ -2.18
TRIM56Q9BRZ2 AC097510.1-201ENST00000510945 133 ntBASIC1.43□□□□□ -2.18
TRIM56Q9BRZ2 RNU6-469P-201ENST00000516253 101 ntBASIC1.43□□□□□ -2.18
TRIM56Q9BRZ2 SNORA31.24-201ENST00000517232 57 ntBASIC1.43□□□□□ -2.18
TRIM56Q9BRZ2 MIR3134-201ENST00000579433 74 ntBASIC1.43□□□□□ -2.18
TRIM56Q9BRZ2 ZNF209P-201ENST00000593450 2304 ntBASIC1.42□□□□□ -2.18
TRIM56Q9BRZ2 MIR489-201ENST00000384923 84 ntBASIC1.42□□□□□ -2.18
TRIM56Q9BRZ2 MIR618-201ENST00000385287 98 ntBASIC1.42□□□□□ -2.18
TRIM56Q9BRZ2 SNORD105-201ENST00000386910 85 ntBASIC1.42□□□□□ -2.18
TRIM56Q9BRZ2 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
TRIM56Q9BRZ2 RNU6-871P-201ENST00000516122 100 ntBASIC1.42□□□□□ -2.18
TRIM56Q9BRZ2 RNA5SP404-201ENST00000517118 132 ntBASIC1.42□□□□□ -2.18
TRIM56Q9BRZ2 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.42□□□□□ -2.18
TRIM56Q9BRZ2 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
TRIM56Q9BRZ2 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
TRIM56Q9BRZ2 RNU6-340P-201ENST00000364005 107 ntBASIC1.41□□□□□ -2.18
TRIM56Q9BRZ2 Y_RNA.371-201ENST00000365591 113 ntBASIC1.41□□□□□ -2.18
TRIM56Q9BRZ2 MIR942-201ENST00000401111 86 ntBASIC1.41□□□□□ -2.18
TRIM56Q9BRZ2 MIR2113-201ENST00000459007 91 ntBASIC1.41□□□□□ -2.18
TRIM56Q9BRZ2 RNU7-104P-201ENST00000459398 79 ntBASIC1.41□□□□□ -2.18
TRIM56Q9BRZ2 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.41□□□□□ -2.18
TRIM56Q9BRZ2 RNU6-70P-201ENST00000516438 60 ntBASIC1.41□□□□□ -2.18
TRIM56Q9BRZ2 AC068338.1-201ENST00000565567 176 ntBASIC1.41□□□□□ -2.18
TRIM56Q9BRZ2 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.19
TRIM56Q9BRZ2 Y_RNA.36-201ENST00000362602 112 ntBASIC1.4□□□□□ -2.19
TRIM56Q9BRZ2 SNORA24B-201ENST00000384176 131 ntBASIC1.4□□□□□ -2.19
TRIM56Q9BRZ2 Y_RNA.606-201ENST00000410579 103 ntBASIC1.4□□□□□ -2.19
TRIM56Q9BRZ2 AC004223.1-201ENST00000479840 271 ntBASIC1.4□□□□□ -2.19
TRIM56Q9BRZ2 RNU7-161P-201ENST00000517289 62 ntBASIC1.4□□□□□ -2.19
TRIM56Q9BRZ2 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
TRIM56Q9BRZ2 RNU6-1126P-201ENST00000384002 107 ntBASIC1.39□□□□□ -2.19
TRIM56Q9BRZ2 RNU6-1052P-201ENST00000411398 104 ntBASIC1.39□□□□□ -2.19
TRIM56Q9BRZ2 AC139453.2-201ENST00000487255 133 ntBASIC1.39□□□□□ -2.19
TRIM56Q9BRZ2 RNU6-719P-201ENST00000516671 104 ntBASIC1.39□□□□□ -2.19
TRIM56Q9BRZ2 RNU1-92P-201ENST00000517017 135 ntBASIC1.39□□□□□ -2.19
TRIM56Q9BRZ2 MIR4421-201ENST00000578133 69 ntBASIC1.39□□□□□ -2.19
TRIM56Q9BRZ2 U6.81-201ENST00000612550 106 ntBASIC1.39□□□□□ -2.19
TRIM56Q9BRZ2 AC067863.3-201ENST00000624172 122 ntBASIC1.39□□□□□ -2.19
TRIM56Q9BRZ2 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
TRIM56Q9BRZ2 MIR26B-201ENST00000362251 77 ntBASIC1.38□□□□□ -2.19
TRIM56Q9BRZ2 SNORA7.1-201ENST00000363750 139 ntBASIC1.38□□□□□ -2.19
TRIM56Q9BRZ2 SNORA8.1-201ENST00000384250 140 ntBASIC1.38□□□□□ -2.19
TRIM56Q9BRZ2 MIR1276-201ENST00000408707 83 ntBASIC1.38□□□□□ -2.19
TRIM56Q9BRZ2 MIR3920-201ENST00000581751 86 ntBASIC1.38□□□□□ -2.19
TRIM56Q9BRZ2 MIR4639-201ENST00000584938 69 ntBASIC1.38□□□□□ -2.19
TRIM56Q9BRZ2 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.38□□□□□ -2.19
TRIM56Q9BRZ2 RNU6-154P-201ENST00000384306 106 ntBASIC1.37□□□□□ -2.19
TRIM56Q9BRZ2 MIR617-201ENST00000385030 97 ntBASIC1.37□□□□□ -2.19
TRIM56Q9BRZ2 RNU6-1177P-201ENST00000391058 104 ntBASIC1.37□□□□□ -2.19
TRIM56Q9BRZ2 RNU7-74P-201ENST00000459104 62 ntBASIC1.37□□□□□ -2.19
TRIM56Q9BRZ2 snoU13.18-201ENST00000459483 104 ntBASIC1.37□□□□□ -2.19
TRIM56Q9BRZ2 RNU6-523P-201ENST00000516304 54 ntBASIC1.37□□□□□ -2.19
TRIM56Q9BRZ2 SNORD124-201ENST00000459577 104 ntBASIC1.36□□□□□ -2.19
TRIM56Q9BRZ2 RNU6-1015P-201ENST00000517121 99 ntBASIC1.36□□□□□ -2.19
TRIM56Q9BRZ2 MIR644A-201ENST00000385262 94 ntBASIC1.35□□□□□ -2.19
TRIM56Q9BRZ2 MIR758-201ENST00000390227 88 ntBASIC1.35□□□□□ -2.19
TRIM56Q9BRZ2 RNU6-587P-201ENST00000391282 106 ntBASIC1.35□□□□□ -2.19
TRIM56Q9BRZ2 AC114801.3-201ENST00000510231 177 ntBASIC1.35□□□□□ -2.19
TRIM56Q9BRZ2 MIR6504-201ENST00000613520 61 ntBASIC1.35□□□□□ -2.19
TRIM56Q9BRZ2 RNU6-824P-201ENST00000363724 104 ntBASIC1.34□□□□□ -2.19
TRIM56Q9BRZ2 MIR573-201ENST00000384964 99 ntBASIC1.34□□□□□ -2.19
TRIM56Q9BRZ2 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
TRIM56Q9BRZ2 RNU1-123P-201ENST00000458950 160 ntBASIC1.34□□□□□ -2.19
TRIM56Q9BRZ2 RNA5SP255-201ENST00000516370 107 ntBASIC1.34□□□□□ -2.19
TRIM56Q9BRZ2 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.34□□□□□ -2.19
TRIM56Q9BRZ2 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
TRIM56Q9BRZ2 SNORD28-201ENST00000384706 75 ntBASIC1.33□□□□□ -2.2
TRIM56Q9BRZ2 RNU6-274P-201ENST00000459566 107 ntBASIC1.33□□□□□ -2.2
TRIM56Q9BRZ2 MIR548AG2-201ENST00000581228 64 ntBASIC1.33□□□□□ -2.2
TRIM56Q9BRZ2 AC244669.1-204ENST00000621564 178 ntBASIC1.33□□□□□ -2.2
TRIM56Q9BRZ2 MIR548L-201ENST00000408303 86 ntBASIC1.32□□□□□ -2.2
TRIM56Q9BRZ2 RNU6-752P-201ENST00000516376 102 ntBASIC1.32□□□□□ -2.2
TRIM56Q9BRZ2 RNU6-687P-201ENST00000516443 89 ntBASIC1.32□□□□□ -2.2
TRIM56Q9BRZ2 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
TRIM56Q9BRZ2 MIR154-201ENST00000385243 84 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 189.5 ms