Protein–RNA interactions for Protein: Q9BR11

ZSWIM1, Zinc finger SWIM domain-containing protein 1, humanhuman

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM1Q9BR11 MIR3064-201ENST00000581130 66 ntBASIC0.91□□□□□ -2.26
ZSWIM1Q9BR11 MIR5588-201ENST00000581890 63 ntBASIC0.91□□□□□ -2.26
ZSWIM1Q9BR11 MIR548BB-201ENST00000626714 66 ntBASIC0.91□□□□□ -2.26
ZSWIM1Q9BR11 U6.100-201ENST00000636230 99 ntBASIC0.91□□□□□ -2.26
ZSWIM1Q9BR11 SNORD115-24-201ENST00000363528 82 ntBASIC0.9□□□□□ -2.27
ZSWIM1Q9BR11 Y_RNA.221-201ENST00000364248 96 ntBASIC0.9□□□□□ -2.27
ZSWIM1Q9BR11 MIR644A-201ENST00000385262 94 ntBASIC0.9□□□□□ -2.27
ZSWIM1Q9BR11 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.9□□□□□ -2.27
ZSWIM1Q9BR11 RNU6-469P-201ENST00000516253 101 ntBASIC0.9□□□□□ -2.27
ZSWIM1Q9BR11 AC104996.3-201ENST00000590718 94 ntBASIC0.9□□□□□ -2.27
ZSWIM1Q9BR11 AC006160.2-201ENST00000637708 154 ntBASIC0.9□□□□□ -2.27
ZSWIM1Q9BR11 SNORD18A-201ENST00000363753 72 ntBASIC0.89□□□□□ -2.27
ZSWIM1Q9BR11 SNORD114-2-201ENST00000363953 78 ntBASIC0.89□□□□□ -2.27
ZSWIM1Q9BR11 RNU6-132P-201ENST00000383863 107 ntBASIC0.89□□□□□ -2.27
ZSWIM1Q9BR11 SNORD28-201ENST00000384706 75 ntBASIC0.89□□□□□ -2.27
ZSWIM1Q9BR11 MIR548U-201ENST00000390728 81 ntBASIC0.89□□□□□ -2.27
ZSWIM1Q9BR11 Y_RNA.596-201ENST00000410462 109 ntBASIC0.89□□□□□ -2.27
ZSWIM1Q9BR11 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.89□□□□□ -2.27
ZSWIM1Q9BR11 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.89□□□□□ -2.27
ZSWIM1Q9BR11 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
ZSWIM1Q9BR11 MIR18A-201ENST00000362310 71 ntBASIC0.88□□□□□ -2.27
ZSWIM1Q9BR11 RNU4-32P-201ENST00000363404 141 ntBASIC0.88□□□□□ -2.27
ZSWIM1Q9BR11 SNORD115-44-201ENST00000365391 82 ntBASIC0.88□□□□□ -2.27
ZSWIM1Q9BR11 RNU7-171P-201ENST00000459581 62 ntBASIC0.88□□□□□ -2.27
ZSWIM1Q9BR11 AC011195.1-201ENST00000578177 177 ntBASIC0.88□□□□□ -2.27
ZSWIM1Q9BR11 MIR3678-201ENST00000578455 94 ntBASIC0.88□□□□□ -2.27
ZSWIM1Q9BR11 MIR4696-201ENST00000581431 70 ntBASIC0.88□□□□□ -2.27
ZSWIM1Q9BR11 RN7SL793P-201ENST00000583259 296 ntBASIC0.88□□□□□ -2.27
ZSWIM1Q9BR11 RNU6-664P-201ENST00000362381 107 ntBASIC0.87□□□□□ -2.27
ZSWIM1Q9BR11 SNORD101-201ENST00000384027 73 ntBASIC0.87□□□□□ -2.27
ZSWIM1Q9BR11 Y_RNA.426-201ENST00000384068 113 ntBASIC0.87□□□□□ -2.27
ZSWIM1Q9BR11 MIR216A-201ENST00000385063 110 ntBASIC0.87□□□□□ -2.27
ZSWIM1Q9BR11 RNA5SP292-201ENST00000390974 118 ntBASIC0.87□□□□□ -2.27
ZSWIM1Q9BR11 Y_RNA.611-201ENST00000410682 108 ntBASIC0.87□□□□□ -2.27
ZSWIM1Q9BR11 RNU6-351P-201ENST00000516097 100 ntBASIC0.87□□□□□ -2.27
ZSWIM1Q9BR11 RNA5SP47-201ENST00000517230 109 ntBASIC0.87□□□□□ -2.27
ZSWIM1Q9BR11 MIR6857-201ENST00000613267 93 ntBASIC0.87□□□□□ -2.27
ZSWIM1Q9BR11 MIRLET7F1-201ENST00000362202 87 ntBASIC0.86□□□□□ -2.27
ZSWIM1Q9BR11 Y_RNA.374-201ENST00000365606 101 ntBASIC0.86□□□□□ -2.27
ZSWIM1Q9BR11 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.86□□□□□ -2.27
ZSWIM1Q9BR11 RNU6-592P-201ENST00000411333 103 ntBASIC0.86□□□□□ -2.27
ZSWIM1Q9BR11 AC093729.1-201ENST00000513074 128 ntBASIC0.86□□□□□ -2.27
ZSWIM1Q9BR11 MIR5000-201ENST00000577717 103 ntBASIC0.86□□□□□ -2.27
ZSWIM1Q9BR11 AC244669.1-204ENST00000621564 178 ntBASIC0.86□□□□□ -2.27
ZSWIM1Q9BR11 SNORD115-37-201ENST00000363768 82 ntBASIC0.85□□□□□ -2.27
ZSWIM1Q9BR11 RNA5SP173-201ENST00000364857 136 ntBASIC0.85□□□□□ -2.27
ZSWIM1Q9BR11 RNU6-1276P-201ENST00000365372 104 ntBASIC0.85□□□□□ -2.27
ZSWIM1Q9BR11 RNU6-242P-201ENST00000384359 107 ntBASIC0.85□□□□□ -2.27
ZSWIM1Q9BR11 Y_RNA.491-201ENST00000384417 107 ntBASIC0.85□□□□□ -2.27
ZSWIM1Q9BR11 Y_RNA.607-201ENST00000410597 98 ntBASIC0.85□□□□□ -2.27
ZSWIM1Q9BR11 RNU7-13P-201ENST00000516413 62 ntBASIC0.85□□□□□ -2.27
ZSWIM1Q9BR11 SCARNA16.5-201ENST00000517114 183 ntBASIC0.85□□□□□ -2.27
ZSWIM1Q9BR11 AC140658.3-201ENST00000567603 271 ntBASIC0.85□□□□□ -2.27
ZSWIM1Q9BR11 MIR3920-201ENST00000581751 86 ntBASIC0.85□□□□□ -2.27
ZSWIM1Q9BR11 MIR6828-201ENST00000636181 60 ntBASIC0.85□□□□□ -2.27
ZSWIM1Q9BR11 RNU6-1229P-201ENST00000364295 107 ntBASIC0.84□□□□□ -2.27
ZSWIM1Q9BR11 Y_RNA.239-201ENST00000364444 113 ntBASIC0.84□□□□□ -2.27
ZSWIM1Q9BR11 MIR608-201ENST00000384820 100 ntBASIC0.84□□□□□ -2.27
ZSWIM1Q9BR11 SNORD41.1-201ENST00000391000 69 ntBASIC0.84□□□□□ -2.27
ZSWIM1Q9BR11 RNU6-935P-201ENST00000410371 100 ntBASIC0.84□□□□□ -2.27
ZSWIM1Q9BR11 RPL39P28-201ENST00000465655 155 ntBASIC0.84□□□□□ -2.27
ZSWIM1Q9BR11 RNU7-153P-201ENST00000516455 62 ntBASIC0.84□□□□□ -2.27
ZSWIM1Q9BR11 SNORA18.5-201ENST00000516616 101 ntBASIC0.84□□□□□ -2.27
ZSWIM1Q9BR11 MIR4796-201ENST00000580742 81 ntBASIC0.84□□□□□ -2.27
ZSWIM1Q9BR11 AC211469.2-201ENST00000605461 205 ntBASIC0.84□□□□□ -2.27
ZSWIM1Q9BR11 Y_RNA.207-201ENST00000364142 106 ntBASIC0.83□□□□□ -2.28
ZSWIM1Q9BR11 RNU6-1126P-201ENST00000384002 107 ntBASIC0.83□□□□□ -2.28
ZSWIM1Q9BR11 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
ZSWIM1Q9BR11 RNU7-104P-201ENST00000459398 79 ntBASIC0.83□□□□□ -2.28
ZSWIM1Q9BR11 MIR4666B-201ENST00000578142 81 ntBASIC0.83□□□□□ -2.28
ZSWIM1Q9BR11 AC067863.3-201ENST00000624172 122 ntBASIC0.83□□□□□ -2.28
ZSWIM1Q9BR11 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
ZSWIM1Q9BR11 Y_RNA.219-201ENST00000364232 113 ntBASIC0.82□□□□□ -2.28
ZSWIM1Q9BR11 RNU6-287P-201ENST00000516230 98 ntBASIC0.82□□□□□ -2.28
ZSWIM1Q9BR11 SNORA25.13-201ENST00000516395 103 ntBASIC0.82□□□□□ -2.28
ZSWIM1Q9BR11 RNU6-624P-201ENST00000363411 107 ntBASIC0.81□□□□□ -2.28
ZSWIM1Q9BR11 RNU6-726P-201ENST00000364680 107 ntBASIC0.81□□□□□ -2.28
ZSWIM1Q9BR11 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.81□□□□□ -2.28
ZSWIM1Q9BR11 MIR548AG2-201ENST00000581228 64 ntBASIC0.81□□□□□ -2.28
ZSWIM1Q9BR11 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.81□□□□□ -2.28
ZSWIM1Q9BR11 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.81□□□□□ -2.28
ZSWIM1Q9BR11 RNU6-573P-201ENST00000383938 106 ntBASIC0.8□□□□□ -2.28
ZSWIM1Q9BR11 RNU6-787P-201ENST00000384032 107 ntBASIC0.8□□□□□ -2.28
ZSWIM1Q9BR11 MIR617-201ENST00000385030 97 ntBASIC0.8□□□□□ -2.28
ZSWIM1Q9BR11 RNA5SP94-201ENST00000516917 108 ntBASIC0.8□□□□□ -2.28
ZSWIM1Q9BR11 MIR3202-2-201ENST00000635980 79 ntBASIC0.8□□□□□ -2.28
ZSWIM1Q9BR11 SNORA36.1-201ENST00000363424 132 ntBASIC0.79□□□□□ -2.28
ZSWIM1Q9BR11 MIR193B-201ENST00000384907 83 ntBASIC0.79□□□□□ -2.28
ZSWIM1Q9BR11 MIR146A-201ENST00000385201 99 ntBASIC0.79□□□□□ -2.28
ZSWIM1Q9BR11 RNA5SP222-201ENST00000411039 105 ntBASIC0.79□□□□□ -2.28
ZSWIM1Q9BR11 MIR2113-201ENST00000459007 91 ntBASIC0.79□□□□□ -2.28
ZSWIM1Q9BR11 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.79□□□□□ -2.28
ZSWIM1Q9BR11 RNU6-110P-201ENST00000384508 104 ntBASIC0.78□□□□□ -2.28
ZSWIM1Q9BR11 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.78□□□□□ -2.28
ZSWIM1Q9BR11 ACA64.5-201ENST00000516207 127 ntBASIC0.78□□□□□ -2.28
ZSWIM1Q9BR11 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.78□□□□□ -2.28
ZSWIM1Q9BR11 SNORA63.2-201ENST00000362603 126 ntBASIC0.77□□□□□ -2.29
ZSWIM1Q9BR11 RNU6-1051P-201ENST00000365471 102 ntBASIC0.77□□□□□ -2.29
ZSWIM1Q9BR11 MIR140-201ENST00000385282 100 ntBASIC0.77□□□□□ -2.29
ZSWIM1Q9BR11 U3.27-201ENST00000391237 200 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 204.8 ms