Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 RNU7-104P-201ENST00000459398 79 ntBASIC0.63□□□□□ -2.31
PKP4Q99569 RNU7-13P-201ENST00000516413 62 ntBASIC0.63□□□□□ -2.31
PKP4Q99569 RNA5SP47-201ENST00000517230 109 ntBASIC0.63□□□□□ -2.31
PKP4Q99569 MTRNR2L2-201ENST00000604882 87 ntBASIC0.63□□□□□ -2.31
PKP4Q99569 U6.100-201ENST00000636230 99 ntBASIC0.63□□□□□ -2.31
PKP4Q99569 MIR4679-1-201ENST00000637619 75 ntBASIC0.63□□□□□ -2.31
PKP4Q99569 RNY1P1-201ENST00000364372 112 ntBASIC0.62□□□□□ -2.31
PKP4Q99569 SNORD73B-201ENST00000364394 72 ntBASIC0.62□□□□□ -2.31
PKP4Q99569 SNORD115-44-201ENST00000365391 82 ntBASIC0.62□□□□□ -2.31
PKP4Q99569 RNU6-811P-201ENST00000384069 107 ntBASIC0.62□□□□□ -2.31
PKP4Q99569 MIR548U-201ENST00000390728 81 ntBASIC0.62□□□□□ -2.31
PKP4Q99569 MIR1236-201ENST00000408340 102 ntBASIC0.62□□□□□ -2.31
PKP4Q99569 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.62□□□□□ -2.31
PKP4Q99569 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.62□□□□□ -2.31
PKP4Q99569 RNU6-267P-201ENST00000516714 103 ntBASIC0.62□□□□□ -2.31
PKP4Q99569 SCARNA16.5-201ENST00000517114 183 ntBASIC0.62□□□□□ -2.31
PKP4Q99569 IGLL4P-201ENST00000614590 133 ntBASIC0.62□□□□□ -2.31
PKP4Q99569 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.62□□□□□ -2.31
PKP4Q99569 AC067863.3-201ENST00000624172 122 ntBASIC0.62□□□□□ -2.31
PKP4Q99569 RNU6-664P-201ENST00000362381 107 ntBASIC0.61□□□□□ -2.31
PKP4Q99569 RNU4-32P-201ENST00000363404 141 ntBASIC0.61□□□□□ -2.31
PKP4Q99569 RNU6-509P-201ENST00000363519 107 ntBASIC0.61□□□□□ -2.31
PKP4Q99569 SNORD101-201ENST00000384027 73 ntBASIC0.61□□□□□ -2.31
PKP4Q99569 RNU6-820P-201ENST00000384273 107 ntBASIC0.61□□□□□ -2.31
PKP4Q99569 MIR519C-201ENST00000385053 87 ntBASIC0.61□□□□□ -2.31
PKP4Q99569 RNA5SP121-201ENST00000516537 101 ntBASIC0.61□□□□□ -2.31
PKP4Q99569 RNU6-762P-201ENST00000517107 102 ntBASIC0.61□□□□□ -2.31
PKP4Q99569 AC018659.1-201ENST00000551083 169 ntBASIC0.61□□□□□ -2.31
PKP4Q99569 MIR4714-201ENST00000580728 77 ntBASIC0.61□□□□□ -2.31
PKP4Q99569 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
PKP4Q99569 Y_RNA.239-201ENST00000364444 113 ntBASIC0.6□□□□□ -2.31
PKP4Q99569 RNU6-132P-201ENST00000383863 107 ntBASIC0.6□□□□□ -2.31
PKP4Q99569 SNORA36.2-201ENST00000384004 127 ntBASIC0.6□□□□□ -2.31
PKP4Q99569 MIR1302-4-201ENST00000408701 150 ntBASIC0.6□□□□□ -2.31
PKP4Q99569 RNA5SP94-201ENST00000516917 108 ntBASIC0.6□□□□□ -2.31
PKP4Q99569 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.6□□□□□ -2.31
PKP4Q99569 MIR3064-201ENST00000581130 66 ntBASIC0.6□□□□□ -2.31
PKP4Q99569 MIR4696-201ENST00000581431 70 ntBASIC0.6□□□□□ -2.31
PKP4Q99569 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.6□□□□□ -2.31
PKP4Q99569 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
PKP4Q99569 MIR494-201ENST00000349529 81 ntBASIC0.59□□□□□ -2.31
PKP4Q99569 MIRLET7F1-201ENST00000362202 87 ntBASIC0.59□□□□□ -2.31
PKP4Q99569 SNORD115-27-201ENST00000364430 82 ntBASIC0.59□□□□□ -2.31
PKP4Q99569 RNU6-497P-201ENST00000365316 104 ntBASIC0.59□□□□□ -2.31
PKP4Q99569 MIR3920-201ENST00000581751 86 ntBASIC0.59□□□□□ -2.31
PKP4Q99569 AC104996.3-201ENST00000590718 94 ntBASIC0.59□□□□□ -2.31
PKP4Q99569 MIR6828-201ENST00000636181 60 ntBASIC0.59□□□□□ -2.31
PKP4Q99569 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.32
PKP4Q99569 SNORD115-37-201ENST00000363768 82 ntBASIC0.58□□□□□ -2.32
PKP4Q99569 Y_RNA.207-201ENST00000364142 106 ntBASIC0.58□□□□□ -2.32
PKP4Q99569 MIR140-201ENST00000385282 100 ntBASIC0.58□□□□□ -2.32
PKP4Q99569 SNORA26.2-201ENST00000390922 122 ntBASIC0.58□□□□□ -2.32
PKP4Q99569 MIR548L-201ENST00000408303 86 ntBASIC0.58□□□□□ -2.32
PKP4Q99569 RN7SKP12-201ENST00000516275 143 ntBASIC0.58□□□□□ -2.32
PKP4Q99569 RNU4-54P-201ENST00000516428 129 ntBASIC0.58□□□□□ -2.32
PKP4Q99569 AC062037.1-201ENST00000605302 128 ntBASIC0.58□□□□□ -2.32
PKP4Q99569 MIR548BB-201ENST00000626714 66 ntBASIC0.58□□□□□ -2.32
PKP4Q99569 SNORA36.1-201ENST00000363424 132 ntBASIC0.57□□□□□ -2.32
PKP4Q99569 RNU6-726P-201ENST00000364680 107 ntBASIC0.57□□□□□ -2.32
PKP4Q99569 RNU6-1126P-201ENST00000384002 107 ntBASIC0.57□□□□□ -2.32
PKP4Q99569 Y_RNA.491-201ENST00000384417 107 ntBASIC0.57□□□□□ -2.32
PKP4Q99569 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
PKP4Q99569 RNA5SP292-201ENST00000390974 118 ntBASIC0.57□□□□□ -2.32
PKP4Q99569 SNORD41.1-201ENST00000391000 69 ntBASIC0.57□□□□□ -2.32
PKP4Q99569 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
PKP4Q99569 RNU6-935P-201ENST00000410371 100 ntBASIC0.57□□□□□ -2.32
PKP4Q99569 Y_RNA.611-201ENST00000410682 108 ntBASIC0.57□□□□□ -2.32
PKP4Q99569 RNU6-287P-201ENST00000516230 98 ntBASIC0.57□□□□□ -2.32
PKP4Q99569 SNORA18.5-201ENST00000516616 101 ntBASIC0.57□□□□□ -2.32
PKP4Q99569 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.57□□□□□ -2.32
PKP4Q99569 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
PKP4Q99569 PVT1_3.1-201ENST00000620853 95 ntBASIC0.57□□□□□ -2.32
PKP4Q99569 MIR6513-201ENST00000621188 64 ntBASIC0.57□□□□□ -2.32
PKP4Q99569 RNA5SP347-201ENST00000362445 119 ntBASIC0.56□□□□□ -2.32
PKP4Q99569 Y_RNA.73-201ENST00000362910 113 ntBASIC0.56□□□□□ -2.32
PKP4Q99569 RNU6-716P-201ENST00000365621 103 ntBASIC0.56□□□□□ -2.32
PKP4Q99569 RNY1P8-201ENST00000383970 114 ntBASIC0.56□□□□□ -2.32
PKP4Q99569 RNY4P29-201ENST00000410801 97 ntBASIC0.56□□□□□ -2.32
PKP4Q99569 MIR2113-201ENST00000459007 91 ntBASIC0.56□□□□□ -2.32
PKP4Q99569 RNU7-74P-201ENST00000459104 62 ntBASIC0.56□□□□□ -2.32
PKP4Q99569 AC022137.1-201ENST00000483735 151 ntBASIC0.56□□□□□ -2.32
PKP4Q99569 AC093729.1-201ENST00000513074 128 ntBASIC0.56□□□□□ -2.32
PKP4Q99569 RNA5SP227-201ENST00000516184 113 ntBASIC0.56□□□□□ -2.32
PKP4Q99569 RNA5SP268-201ENST00000516828 124 ntBASIC0.56□□□□□ -2.32
PKP4Q99569 RNU6-1057P-201ENST00000517162 102 ntBASIC0.56□□□□□ -2.32
PKP4Q99569 MIR4796-201ENST00000580742 81 ntBASIC0.56□□□□□ -2.32
PKP4Q99569 MIR617-201ENST00000385030 97 ntBASIC0.55□□□□□ -2.32
PKP4Q99569 MIR92A1-201ENST00000385233 78 ntBASIC0.55□□□□□ -2.32
PKP4Q99569 RNU7-153P-201ENST00000516455 62 ntBASIC0.55□□□□□ -2.32
PKP4Q99569 MIR548AG2-201ENST00000581228 64 ntBASIC0.55□□□□□ -2.32
PKP4Q99569 MIR5588-201ENST00000581890 63 ntBASIC0.55□□□□□ -2.32
PKP4Q99569 RNU6-979P-201ENST00000383896 107 ntBASIC0.54□□□□□ -2.32
PKP4Q99569 Y_RNA.426-201ENST00000384068 113 ntBASIC0.54□□□□□ -2.32
PKP4Q99569 RNU6-242P-201ENST00000384359 107 ntBASIC0.54□□□□□ -2.32
PKP4Q99569 RNA5SP480-201ENST00000516840 109 ntBASIC0.54□□□□□ -2.32
PKP4Q99569 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.54□□□□□ -2.32
PKP4Q99569 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.54□□□□□ -2.32
PKP4Q99569 AC092634.7-201ENST00000621022 103 ntBASIC0.54□□□□□ -2.32
PKP4Q99569 AC006160.2-201ENST00000637708 154 ntBASIC0.54□□□□□ -2.32
PKP4Q99569 Y_RNA.36-201ENST00000362602 112 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms