Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
CNKSR3Q6P9H4 RNU6-1052P-201ENST00000411398 104 ntBASIC1.46□□□□□ -2.18
CNKSR3Q6P9H4 RNU7-21P-201ENST00000459430 62 ntBASIC1.46□□□□□ -2.18
CNKSR3Q6P9H4 RNU6-719P-201ENST00000516671 104 ntBASIC1.46□□□□□ -2.18
CNKSR3Q6P9H4 AC008608.1-201ENST00000603910 127 ntBASIC1.46□□□□□ -2.18
CNKSR3Q6P9H4 MIR6734-201ENST00000621166 68 ntBASIC1.46□□□□□ -2.18
CNKSR3Q6P9H4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CNKSR3Q6P9H4 RNY4P3-201ENST00000365254 95 ntBASIC1.45□□□□□ -2.18
CNKSR3Q6P9H4 SNORA40.6-201ENST00000391153 128 ntBASIC1.45□□□□□ -2.18
CNKSR3Q6P9H4 MIR1265-201ENST00000408444 86 ntBASIC1.45□□□□□ -2.18
CNKSR3Q6P9H4 Y_RNA.606-201ENST00000410579 103 ntBASIC1.45□□□□□ -2.18
CNKSR3Q6P9H4 RPS29P23-201ENST00000458635 123 ntBASIC1.45□□□□□ -2.18
CNKSR3Q6P9H4 RNU7-102P-201ENST00000458948 62 ntBASIC1.45□□□□□ -2.18
CNKSR3Q6P9H4 AC027335.2-201ENST00000624030 375 ntBASIC1.45□□□□□ -2.18
CNKSR3Q6P9H4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.44□□□□□ -2.18
CNKSR3Q6P9H4 RNU6-824P-201ENST00000363724 104 ntBASIC1.44□□□□□ -2.18
CNKSR3Q6P9H4 MIR320A-201ENST00000385302 82 ntBASIC1.44□□□□□ -2.18
CNKSR3Q6P9H4 RNU6-935P-201ENST00000410371 100 ntBASIC1.44□□□□□ -2.18
CNKSR3Q6P9H4 AC244505.6-201ENST00000452829 130 ntBASIC1.44□□□□□ -2.18
CNKSR3Q6P9H4 MIR4804-201ENST00000581683 73 ntBASIC1.44□□□□□ -2.18
CNKSR3Q6P9H4 SNORD26-201ENST00000384147 75 ntBASIC1.43□□□□□ -2.18
CNKSR3Q6P9H4 RNU6-364P-201ENST00000384387 107 ntBASIC1.43□□□□□ -2.18
CNKSR3Q6P9H4 MIR451A-201ENST00000385059 72 ntBASIC1.43□□□□□ -2.18
CNKSR3Q6P9H4 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
CNKSR3Q6P9H4 MIR938-201ENST00000401216 83 ntBASIC1.43□□□□□ -2.18
CNKSR3Q6P9H4 AL591704.2-201ENST00000421658 181 ntBASIC1.43□□□□□ -2.18
CNKSR3Q6P9H4 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.43□□□□□ -2.18
CNKSR3Q6P9H4 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.43□□□□□ -2.18
CNKSR3Q6P9H4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
CNKSR3Q6P9H4 RNU6-649P-201ENST00000384463 107 ntBASIC1.42□□□□□ -2.18
CNKSR3Q6P9H4 MIR154-201ENST00000385243 84 ntBASIC1.42□□□□□ -2.18
CNKSR3Q6P9H4 RNU6-910P-201ENST00000390844 107 ntBASIC1.42□□□□□ -2.18
CNKSR3Q6P9H4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.42□□□□□ -2.18
CNKSR3Q6P9H4 RNU7-56P-201ENST00000458744 62 ntBASIC1.42□□□□□ -2.18
CNKSR3Q6P9H4 AC097510.1-201ENST00000510945 133 ntBASIC1.42□□□□□ -2.18
CNKSR3Q6P9H4 RNU6-287P-201ENST00000516230 98 ntBASIC1.42□□□□□ -2.18
CNKSR3Q6P9H4 U6.81-201ENST00000612550 106 ntBASIC1.42□□□□□ -2.18
CNKSR3Q6P9H4 RNU1-93P-201ENST00000364704 169 ntBASIC1.41□□□□□ -2.18
CNKSR3Q6P9H4 Y_RNA.340-201ENST00000365330 92 ntBASIC1.41□□□□□ -2.18
CNKSR3Q6P9H4 Y_RNA.540-201ENST00000384638 111 ntBASIC1.41□□□□□ -2.18
CNKSR3Q6P9H4 SNORD30.1-201ENST00000391309 70 ntBASIC1.41□□□□□ -2.18
CNKSR3Q6P9H4 RNU2-59P-201ENST00000410482 191 ntBASIC1.41□□□□□ -2.18
CNKSR3Q6P9H4 SNORD79.1-201ENST00000516069 84 ntBASIC1.41□□□□□ -2.18
CNKSR3Q6P9H4 RNA5SP327-201ENST00000362494 101 ntBASIC1.4□□□□□ -2.19
CNKSR3Q6P9H4 RNA5SP363-201ENST00000365072 115 ntBASIC1.4□□□□□ -2.19
CNKSR3Q6P9H4 SNORA80D-201ENST00000384488 135 ntBASIC1.4□□□□□ -2.19
CNKSR3Q6P9H4 AC125388.1-201ENST00000459631 156 ntBASIC1.4□□□□□ -2.19
CNKSR3Q6P9H4 SNORA70.22-201ENST00000517160 124 ntBASIC1.4□□□□□ -2.19
CNKSR3Q6P9H4 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
CNKSR3Q6P9H4 MIR26B-201ENST00000362251 77 ntBASIC1.39□□□□□ -2.19
CNKSR3Q6P9H4 Y_RNA.32-201ENST00000362589 110 ntBASIC1.39□□□□□ -2.19
CNKSR3Q6P9H4 Y_RNA.258-201ENST00000364613 105 ntBASIC1.39□□□□□ -2.19
CNKSR3Q6P9H4 RNU7-90P-201ENST00000459216 62 ntBASIC1.39□□□□□ -2.19
CNKSR3Q6P9H4 RNU6-977P-201ENST00000516411 103 ntBASIC1.39□□□□□ -2.19
CNKSR3Q6P9H4 SNORA31.14-201ENST00000516728 116 ntBASIC1.39□□□□□ -2.19
CNKSR3Q6P9H4 MIR3675-201ENST00000583661 73 ntBASIC1.39□□□□□ -2.19
CNKSR3Q6P9H4 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.39□□□□□ -2.19
CNKSR3Q6P9H4 uc_338.16-201ENST00000621804 95 ntBASIC1.39□□□□□ -2.19
CNKSR3Q6P9H4 U6.111-201ENST00000636093 83 ntBASIC1.39□□□□□ -2.19
CNKSR3Q6P9H4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.38□□□□□ -2.19
CNKSR3Q6P9H4 RNU6-681P-201ENST00000364012 104 ntBASIC1.38□□□□□ -2.19
CNKSR3Q6P9H4 SNORA25.8-201ENST00000364831 128 ntBASIC1.38□□□□□ -2.19
CNKSR3Q6P9H4 MIR222-201ENST00000384992 110 ntBASIC1.38□□□□□ -2.19
CNKSR3Q6P9H4 RNU6-663P-201ENST00000391105 106 ntBASIC1.38□□□□□ -2.19
CNKSR3Q6P9H4 RNU6-994P-201ENST00000410507 111 ntBASIC1.38□□□□□ -2.19
CNKSR3Q6P9H4 MIR548AG2-201ENST00000581228 64 ntBASIC1.38□□□□□ -2.19
CNKSR3Q6P9H4 SNORA25-201ENST00000384384 134 ntBASIC1.37□□□□□ -2.19
CNKSR3Q6P9H4 RNU6-800P-201ENST00000384473 103 ntBASIC1.37□□□□□ -2.19
CNKSR3Q6P9H4 MIR7-2-201ENST00000384970 110 ntBASIC1.37□□□□□ -2.19
CNKSR3Q6P9H4 RNU6-1177P-201ENST00000391058 104 ntBASIC1.37□□□□□ -2.19
CNKSR3Q6P9H4 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.37□□□□□ -2.19
CNKSR3Q6P9H4 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.37□□□□□ -2.19
CNKSR3Q6P9H4 AC022709.1-201ENST00000615967 87 ntBASIC1.37□□□□□ -2.19
CNKSR3Q6P9H4 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CNKSR3Q6P9H4 RNA5SP403-201ENST00000363598 108 ntBASIC1.36□□□□□ -2.19
CNKSR3Q6P9H4 SNORD45A-201ENST00000384512 84 ntBASIC1.36□□□□□ -2.19
CNKSR3Q6P9H4 MIR100-201ENST00000385259 80 ntBASIC1.36□□□□□ -2.19
CNKSR3Q6P9H4 RNU1-119P-201ENST00000391122 165 ntBASIC1.36□□□□□ -2.19
CNKSR3Q6P9H4 RNU6-955P-201ENST00000410497 104 ntBASIC1.36□□□□□ -2.19
CNKSR3Q6P9H4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CNKSR3Q6P9H4 SNORD114-27-201ENST00000363766 70 ntBASIC1.35□□□□□ -2.19
CNKSR3Q6P9H4 SNORD115-22-201ENST00000364456 82 ntBASIC1.35□□□□□ -2.19
CNKSR3Q6P9H4 RNU6-382P-201ENST00000365181 106 ntBASIC1.35□□□□□ -2.19
CNKSR3Q6P9H4 MIR520F-201ENST00000384824 87 ntBASIC1.35□□□□□ -2.19
CNKSR3Q6P9H4 MIR520E-201ENST00000384867 87 ntBASIC1.35□□□□□ -2.19
CNKSR3Q6P9H4 RNU7-161P-201ENST00000517289 62 ntBASIC1.35□□□□□ -2.19
CNKSR3Q6P9H4 MIR1-1-201ENST00000362147 71 ntBASIC1.34□□□□□ -2.19
CNKSR3Q6P9H4 SNORD45.1-201ENST00000363181 77 ntBASIC1.34□□□□□ -2.19
CNKSR3Q6P9H4 SNORD115-24-201ENST00000363528 82 ntBASIC1.34□□□□□ -2.19
CNKSR3Q6P9H4 Y_RNA.205-201ENST00000364128 113 ntBASIC1.34□□□□□ -2.19
CNKSR3Q6P9H4 SNORD115-44-201ENST00000365391 82 ntBASIC1.34□□□□□ -2.19
CNKSR3Q6P9H4 MIR150-201ENST00000385048 84 ntBASIC1.34□□□□□ -2.19
CNKSR3Q6P9H4 U3.27-201ENST00000391237 200 ntBASIC1.34□□□□□ -2.19
CNKSR3Q6P9H4 MIR3920-201ENST00000581751 86 ntBASIC1.34□□□□□ -2.19
CNKSR3Q6P9H4 MIR4773-1-201ENST00000637203 78 ntBASIC1.34□□□□□ -2.19
CNKSR3Q6P9H4 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CNKSR3Q6P9H4 RNU6-1126P-201ENST00000384002 107 ntBASIC1.33□□□□□ -2.2
CNKSR3Q6P9H4 MIR758-201ENST00000390227 88 ntBASIC1.33□□□□□ -2.2
CNKSR3Q6P9H4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
CNKSR3Q6P9H4 MIR1827-201ENST00000408549 66 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 252.1 ms