Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 SNORD45.1-201ENST00000363181 77 ntBASIC2.14□□□□□ -2.07
PRPF38BQ5VTL8 SNORA25.4-201ENST00000363666 124 ntBASIC2.14□□□□□ -2.07
PRPF38BQ5VTL8 MIR451A-201ENST00000385059 72 ntBASIC2.14□□□□□ -2.07
PRPF38BQ5VTL8 RNU4-37P-201ENST00000410214 84 ntBASIC2.14□□□□□ -2.07
PRPF38BQ5VTL8 AC079804.2-201ENST00000490376 200 ntBASIC2.14□□□□□ -2.07
PRPF38BQ5VTL8 RNU6-1265P-201ENST00000516342 103 ntBASIC2.14□□□□□ -2.07
PRPF38BQ5VTL8 RNU6-977P-201ENST00000516411 103 ntBASIC2.14□□□□□ -2.07
PRPF38BQ5VTL8 RNU6-1223P-201ENST00000517124 104 ntBASIC2.14□□□□□ -2.07
PRPF38BQ5VTL8 AL645939.4-201ENST00000604495 135 ntBASIC2.14□□□□□ -2.07
PRPF38BQ5VTL8 MIR8081-201ENST00000611533 95 ntBASIC2.14□□□□□ -2.07
PRPF38BQ5VTL8 DLEU2_3.2-201ENST00000612883 73 ntBASIC2.14□□□□□ -2.07
PRPF38BQ5VTL8 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
PRPF38BQ5VTL8 RNU7-90P-201ENST00000459216 62 ntBASIC2.13□□□□□ -2.07
PRPF38BQ5VTL8 RNU7-21P-201ENST00000459430 62 ntBASIC2.13□□□□□ -2.07
PRPF38BQ5VTL8 RNA5SP476-201ENST00000516613 103 ntBASIC2.13□□□□□ -2.07
PRPF38BQ5VTL8 RNU6-881P-201ENST00000516813 102 ntBASIC2.13□□□□□ -2.07
PRPF38BQ5VTL8 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PRPF38BQ5VTL8 SNORD116-24-201ENST00000384549 92 ntBASIC2.12□□□□□ -2.07
PRPF38BQ5VTL8 MIR100-201ENST00000385259 80 ntBASIC2.12□□□□□ -2.07
PRPF38BQ5VTL8 HMGN2P38-201ENST00000423806 265 ntBASIC2.12□□□□□ -2.07
PRPF38BQ5VTL8 RNU6-902P-201ENST00000517212 91 ntBASIC2.12□□□□□ -2.07
PRPF38BQ5VTL8 MIR4255-201ENST00000579351 72 ntBASIC2.12□□□□□ -2.07
PRPF38BQ5VTL8 MIR8053-201ENST00000613344 75 ntBASIC2.12□□□□□ -2.07
PRPF38BQ5VTL8 RNU7-102P-201ENST00000458948 62 ntBASIC2.11□□□□□ -2.07
PRPF38BQ5VTL8 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.11□□□□□ -2.07
PRPF38BQ5VTL8 RNU6-499P-201ENST00000365615 107 ntBASIC2.1□□□□□ -2.07
PRPF38BQ5VTL8 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
PRPF38BQ5VTL8 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
PRPF38BQ5VTL8 RNA5SP245-201ENST00000364239 121 ntBASIC2.09□□□□□ -2.07
PRPF38BQ5VTL8 MIR9-3-201ENST00000385084 90 ntBASIC2.09□□□□□ -2.07
PRPF38BQ5VTL8 RNU1-119P-201ENST00000391122 165 ntBASIC2.09□□□□□ -2.07
PRPF38BQ5VTL8 AL157834.3-201ENST00000615543 103 ntBASIC2.09□□□□□ -2.07
PRPF38BQ5VTL8 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.08
PRPF38BQ5VTL8 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
PRPF38BQ5VTL8 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
PRPF38BQ5VTL8 MIR1-1-201ENST00000362147 71 ntBASIC2.08□□□□□ -2.08
PRPF38BQ5VTL8 SNORD113.1-201ENST00000363280 73 ntBASIC2.08□□□□□ -2.08
PRPF38BQ5VTL8 Y_RNA.258-201ENST00000364613 105 ntBASIC2.08□□□□□ -2.08
PRPF38BQ5VTL8 RNU6-604P-201ENST00000390917 100 ntBASIC2.08□□□□□ -2.08
PRPF38BQ5VTL8 AC067940.1-201ENST00000458411 300 ntBASIC2.08□□□□□ -2.08
PRPF38BQ5VTL8 HAR1A.1-201ENST00000459583 118 ntBASIC2.08□□□□□ -2.08
PRPF38BQ5VTL8 AC008608.1-201ENST00000603910 127 ntBASIC2.08□□□□□ -2.08
PRPF38BQ5VTL8 MIR502-201ENST00000606349 86 ntBASIC2.08□□□□□ -2.08
PRPF38BQ5VTL8 RNU6-1216P-201ENST00000362590 107 ntBASIC2.07□□□□□ -2.08
PRPF38BQ5VTL8 RNU6-1177P-201ENST00000391058 104 ntBASIC2.07□□□□□ -2.08
PRPF38BQ5VTL8 RNU6ATAC20P-201ENST00000408436 127 ntBASIC2.07□□□□□ -2.08
PRPF38BQ5VTL8 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.07□□□□□ -2.08
PRPF38BQ5VTL8 RNU6-1057P-201ENST00000517162 102 ntBASIC2.07□□□□□ -2.08
PRPF38BQ5VTL8 MIR4804-201ENST00000581683 73 ntBASIC2.07□□□□□ -2.08
PRPF38BQ5VTL8 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
PRPF38BQ5VTL8 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
PRPF38BQ5VTL8 SNORA7.1-201ENST00000363750 139 ntBASIC2.06□□□□□ -2.08
PRPF38BQ5VTL8 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2.06□□□□□ -2.08
PRPF38BQ5VTL8 AC104435.1-201ENST00000483483 166 ntBASIC2.06□□□□□ -2.08
PRPF38BQ5VTL8 SNORD79.1-201ENST00000516069 84 ntBASIC2.06□□□□□ -2.08
PRPF38BQ5VTL8 SNORA70.22-201ENST00000517160 124 ntBASIC2.06□□□□□ -2.08
PRPF38BQ5VTL8 MIR4511-201ENST00000582784 87 ntBASIC2.06□□□□□ -2.08
PRPF38BQ5VTL8 MIR4773-1-201ENST00000637203 78 ntBASIC2.06□□□□□ -2.08
PRPF38BQ5VTL8 RNU6-382P-201ENST00000365181 106 ntBASIC2.05□□□□□ -2.08
PRPF38BQ5VTL8 RNU4-52P-201ENST00000384209 138 ntBASIC2.05□□□□□ -2.08
PRPF38BQ5VTL8 MIR520F-201ENST00000384824 87 ntBASIC2.05□□□□□ -2.08
PRPF38BQ5VTL8 RNU6ATAC33P-201ENST00000408647 126 ntBASIC2.05□□□□□ -2.08
PRPF38BQ5VTL8 MIR151B-201ENST00000584249 96 ntBASIC2.05□□□□□ -2.08
PRPF38BQ5VTL8 MIR222-201ENST00000384992 110 ntBASIC2.04□□□□□ -2.08
PRPF38BQ5VTL8 RNU6-287P-201ENST00000516230 98 ntBASIC2.04□□□□□ -2.08
PRPF38BQ5VTL8 RN7SL793P-201ENST00000583259 296 ntBASIC2.04□□□□□ -2.08
PRPF38BQ5VTL8 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.04□□□□□ -2.08
PRPF38BQ5VTL8 RNU7-56P-201ENST00000458744 62 ntBASIC2.03□□□□□ -2.08
PRPF38BQ5VTL8 AC103706.3-201ENST00000636297 85 ntBASIC2.03□□□□□ -2.08
PRPF38BQ5VTL8 U3.27-201ENST00000391237 200 ntBASIC2.02□□□□□ -2.09
PRPF38BQ5VTL8 RNU6-274P-201ENST00000459566 107 ntBASIC2.02□□□□□ -2.09
PRPF38BQ5VTL8 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.02□□□□□ -2.09
PRPF38BQ5VTL8 AL109933.3-201ENST00000619095 188 ntBASIC2.02□□□□□ -2.09
PRPF38BQ5VTL8 MIR96-201ENST00000362288 78 ntBASIC2.01□□□□□ -2.09
PRPF38BQ5VTL8 RNU6-369P-201ENST00000362515 102 ntBASIC2.01□□□□□ -2.09
PRPF38BQ5VTL8 AC110620.1-201ENST00000416042 228 ntBASIC2.01□□□□□ -2.09
PRPF38BQ5VTL8 AC244505.6-201ENST00000452829 130 ntBASIC2.01□□□□□ -2.09
PRPF38BQ5VTL8 RNU6-752P-201ENST00000516376 102 ntBASIC2.01□□□□□ -2.09
PRPF38BQ5VTL8 AC244098.3-201ENST00000424803 96 ntBASIC2□□□□□ -2.09
PRPF38BQ5VTL8 MIR6788-201ENST00000618842 66 ntBASIC2□□□□□ -2.09
PRPF38BQ5VTL8 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
PRPF38BQ5VTL8 RNA5SP457-201ENST00000363657 124 ntBASIC1.99□□□□□ -2.09
PRPF38BQ5VTL8 RNU1-93P-201ENST00000364704 169 ntBASIC1.99□□□□□ -2.09
PRPF38BQ5VTL8 RNU6-669P-201ENST00000365575 107 ntBASIC1.98□□□□□ -2.09
PRPF38BQ5VTL8 SNORA40.6-201ENST00000391153 128 ntBASIC1.98□□□□□ -2.09
PRPF38BQ5VTL8 RPS29P1-201ENST00000465274 159 ntBASIC1.98□□□□□ -2.09
PRPF38BQ5VTL8 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.98□□□□□ -2.09
PRPF38BQ5VTL8 MIR4448-201ENST00000584360 86 ntBASIC1.98□□□□□ -2.09
PRPF38BQ5VTL8 MIR520E-201ENST00000384867 87 ntBASIC1.97□□□□□ -2.09
PRPF38BQ5VTL8 RNU6-982P-201ENST00000516216 102 ntBASIC1.97□□□□□ -2.09
PRPF38BQ5VTL8 RNU7-13P-201ENST00000516413 62 ntBASIC1.97□□□□□ -2.09
PRPF38BQ5VTL8 SNORA31.14-201ENST00000516728 116 ntBASIC1.97□□□□□ -2.09
PRPF38BQ5VTL8 SNORD53B-201ENST00000577887 78 ntBASIC1.97□□□□□ -2.09
PRPF38BQ5VTL8 MIR4421-201ENST00000578133 69 ntBASIC1.97□□□□□ -2.09
PRPF38BQ5VTL8 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.97□□□□□ -2.09
PRPF38BQ5VTL8 Y_RNA.32-201ENST00000362589 110 ntBASIC1.96□□□□□ -2.1
PRPF38BQ5VTL8 SNORD115-24-201ENST00000363528 82 ntBASIC1.96□□□□□ -2.1
PRPF38BQ5VTL8 Y_RNA.174-201ENST00000363781 105 ntBASIC1.96□□□□□ -2.1
PRPF38BQ5VTL8 RNU6-1187P-201ENST00000364771 110 ntBASIC1.96□□□□□ -2.1
PRPF38BQ5VTL8 SNORD115-44-201ENST00000365391 82 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 277.3 ms