Protein–RNA interactions for Protein: Q53GI3

ZNF394, Zinc finger protein 394, humanhuman

Predictions only

Length 561 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF394Q53GI3 MIR6788-201ENST00000618842 66 ntBASIC0.9□□□□□ -2.27
ZNF394Q53GI3 SNORA36.1-201ENST00000363424 132 ntBASIC0.89□□□□□ -2.27
ZNF394Q53GI3 SNORA8.2-201ENST00000384372 139 ntBASIC0.89□□□□□ -2.27
ZNF394Q53GI3 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.89□□□□□ -2.27
ZNF394Q53GI3 MIR1236-201ENST00000408340 102 ntBASIC0.89□□□□□ -2.27
ZNF394Q53GI3 Y_RNA.620-201ENST00000411009 88 ntBASIC0.89□□□□□ -2.27
ZNF394Q53GI3 MIR4696-201ENST00000581431 70 ntBASIC0.89□□□□□ -2.27
ZNF394Q53GI3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
ZNF394Q53GI3 RNU6-633P-201ENST00000362612 103 ntBASIC0.88□□□□□ -2.27
ZNF394Q53GI3 SNORD114-2-201ENST00000363953 78 ntBASIC0.88□□□□□ -2.27
ZNF394Q53GI3 RNU6-1126P-201ENST00000384002 107 ntBASIC0.88□□□□□ -2.27
ZNF394Q53GI3 SNORD71-201ENST00000411292 86 ntBASIC0.88□□□□□ -2.27
ZNF394Q53GI3 AC104996.3-201ENST00000590718 94 ntBASIC0.88□□□□□ -2.27
ZNF394Q53GI3 RNY1P8-201ENST00000383970 114 ntBASIC0.87□□□□□ -2.27
ZNF394Q53GI3 RNU6-675P-201ENST00000384236 104 ntBASIC0.87□□□□□ -2.27
ZNF394Q53GI3 RNY1P4-201ENST00000384595 115 ntBASIC0.87□□□□□ -2.27
ZNF394Q53GI3 MIR617-201ENST00000385030 97 ntBASIC0.87□□□□□ -2.27
ZNF394Q53GI3 MIR216B-201ENST00000390186 82 ntBASIC0.87□□□□□ -2.27
ZNF394Q53GI3 RNU6-935P-201ENST00000410371 100 ntBASIC0.87□□□□□ -2.27
ZNF394Q53GI3 RNU6-1057P-201ENST00000517162 102 ntBASIC0.87□□□□□ -2.27
ZNF394Q53GI3 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.87□□□□□ -2.27
ZNF394Q53GI3 RNA5SP517-201ENST00000364724 117 ntBASIC0.86□□□□□ -2.27
ZNF394Q53GI3 SNORA40.8-201ENST00000411034 126 ntBASIC0.86□□□□□ -2.27
ZNF394Q53GI3 RNU6-351P-201ENST00000516097 100 ntBASIC0.86□□□□□ -2.27
ZNF394Q53GI3 RNU6-287P-201ENST00000516230 98 ntBASIC0.86□□□□□ -2.27
ZNF394Q53GI3 AC018659.1-201ENST00000551083 169 ntBASIC0.86□□□□□ -2.27
ZNF394Q53GI3 MIR3064-201ENST00000581130 66 ntBASIC0.86□□□□□ -2.27
ZNF394Q53GI3 MIR6515-201ENST00000619843 57 ntBASIC0.86□□□□□ -2.27
ZNF394Q53GI3 Y_RNA.17-201ENST00000362433 111 ntBASIC0.85□□□□□ -2.27
ZNF394Q53GI3 Y_RNA.207-201ENST00000364142 106 ntBASIC0.85□□□□□ -2.27
ZNF394Q53GI3 RNU6-219P-201ENST00000364728 107 ntBASIC0.85□□□□□ -2.27
ZNF394Q53GI3 RNU6-716P-201ENST00000365621 103 ntBASIC0.85□□□□□ -2.27
ZNF394Q53GI3 MIR519C-201ENST00000385053 87 ntBASIC0.85□□□□□ -2.27
ZNF394Q53GI3 MIR548J-201ENST00000408833 112 ntBASIC0.85□□□□□ -2.27
ZNF394Q53GI3 RNU6-402P-201ENST00000410678 103 ntBASIC0.85□□□□□ -2.27
ZNF394Q53GI3 RNU4-32P-201ENST00000363404 141 ntBASIC0.84□□□□□ -2.27
ZNF394Q53GI3 Y_RNA.491-201ENST00000384417 107 ntBASIC0.84□□□□□ -2.27
ZNF394Q53GI3 MIR2113-201ENST00000459007 91 ntBASIC0.84□□□□□ -2.27
ZNF394Q53GI3 RN7SKP12-201ENST00000516275 143 ntBASIC0.84□□□□□ -2.27
ZNF394Q53GI3 RNU6-509P-201ENST00000363519 107 ntBASIC0.83□□□□□ -2.28
ZNF394Q53GI3 MIR7107-201ENST00000611489 80 ntBASIC0.83□□□□□ -2.28
ZNF394Q53GI3 AC022709.1-201ENST00000615967 87 ntBASIC0.83□□□□□ -2.28
ZNF394Q53GI3 AL162376.1-201ENST00000624117 175 ntBASIC0.83□□□□□ -2.28
ZNF394Q53GI3 MIRLET7F1-201ENST00000362202 87 ntBASIC0.82□□□□□ -2.28
ZNF394Q53GI3 SNORD118-201ENST00000363593 134 ntBASIC0.82□□□□□ -2.28
ZNF394Q53GI3 RNU6-132P-201ENST00000383863 107 ntBASIC0.82□□□□□ -2.28
ZNF394Q53GI3 AC073869.9-201ENST00000641610 120 ntBASIC0.82□□□□□ -2.28
ZNF394Q53GI3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
ZNF394Q53GI3 SNORD115-37-201ENST00000363768 82 ntBASIC0.81□□□□□ -2.28
ZNF394Q53GI3 MIR450A2-201ENST00000385022 100 ntBASIC0.81□□□□□ -2.28
ZNF394Q53GI3 U3.27-201ENST00000391237 200 ntBASIC0.81□□□□□ -2.28
ZNF394Q53GI3 Y_RNA.593-201ENST00000410292 98 ntBASIC0.81□□□□□ -2.28
ZNF394Q53GI3 IGLL4P-201ENST00000614590 133 ntBASIC0.81□□□□□ -2.28
ZNF394Q53GI3 MIR6866-201ENST00000638146 69 ntBASIC0.81□□□□□ -2.28
ZNF394Q53GI3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.81□□□□□ -2.28
ZNF394Q53GI3 MIR518A1-201ENST00000385068 85 ntBASIC0.8□□□□□ -2.28
ZNF394Q53GI3 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
ZNF394Q53GI3 RNY4P3-201ENST00000365254 95 ntBASIC0.79□□□□□ -2.28
ZNF394Q53GI3 RNU6-497P-201ENST00000365316 104 ntBASIC0.79□□□□□ -2.28
ZNF394Q53GI3 RNU6-863P-201ENST00000515989 104 ntBASIC0.79□□□□□ -2.28
ZNF394Q53GI3 RNA5SP121-201ENST00000516537 101 ntBASIC0.79□□□□□ -2.28
ZNF394Q53GI3 MIR5000-201ENST00000577717 103 ntBASIC0.79□□□□□ -2.28
ZNF394Q53GI3 MIR548AG2-201ENST00000581228 64 ntBASIC0.79□□□□□ -2.28
ZNF394Q53GI3 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.79□□□□□ -2.28
ZNF394Q53GI3 RNY1P1-201ENST00000364372 112 ntBASIC0.78□□□□□ -2.28
ZNF394Q53GI3 RNU6-945P-201ENST00000383947 107 ntBASIC0.78□□□□□ -2.28
ZNF394Q53GI3 MIR598-201ENST00000384868 97 ntBASIC0.78□□□□□ -2.28
ZNF394Q53GI3 MIR519E-201ENST00000385075 84 ntBASIC0.78□□□□□ -2.28
ZNF394Q53GI3 SNORA18.5-201ENST00000516616 101 ntBASIC0.78□□□□□ -2.28
ZNF394Q53GI3 RNA5SP292-201ENST00000390974 118 ntBASIC0.77□□□□□ -2.29
ZNF394Q53GI3 CYP3A137P-201ENST00000562436 69 ntBASIC0.77□□□□□ -2.29
ZNF394Q53GI3 MIR6835-201ENST00000621552 64 ntBASIC0.77□□□□□ -2.29
ZNF394Q53GI3 RNU6-820P-201ENST00000384273 107 ntBASIC0.76□□□□□ -2.29
ZNF394Q53GI3 MIR451A-201ENST00000385059 72 ntBASIC0.76□□□□□ -2.29
ZNF394Q53GI3 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
ZNF394Q53GI3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.76□□□□□ -2.29
ZNF394Q53GI3 RNU2-59P-201ENST00000410482 191 ntBASIC0.76□□□□□ -2.29
ZNF394Q53GI3 RNU6-848P-201ENST00000515948 107 ntBASIC0.76□□□□□ -2.29
ZNF394Q53GI3 RNU6-617P-201ENST00000516147 107 ntBASIC0.76□□□□□ -2.29
ZNF394Q53GI3 RNU6-473P-201ENST00000516164 107 ntBASIC0.76□□□□□ -2.29
ZNF394Q53GI3 RNU6-1049P-201ENST00000516414 107 ntBASIC0.76□□□□□ -2.29
ZNF394Q53GI3 MIR4796-201ENST00000580742 81 ntBASIC0.76□□□□□ -2.29
ZNF394Q53GI3 SNORA25.18-201ENST00000607153 114 ntBASIC0.76□□□□□ -2.29
ZNF394Q53GI3 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.76□□□□□ -2.29
ZNF394Q53GI3 SNORD115-27-201ENST00000364430 82 ntBASIC0.75□□□□□ -2.29
ZNF394Q53GI3 RNU6-269P-201ENST00000391077 97 ntBASIC0.75□□□□□ -2.29
ZNF394Q53GI3 AC098934.3-201ENST00000430450 190 ntBASIC0.75□□□□□ -2.29
ZNF394Q53GI3 AC093729.1-201ENST00000513074 128 ntBASIC0.75□□□□□ -2.29
ZNF394Q53GI3 RNU4-54P-201ENST00000516428 129 ntBASIC0.75□□□□□ -2.29
ZNF394Q53GI3 RNU6-267P-201ENST00000516714 103 ntBASIC0.75□□□□□ -2.29
ZNF394Q53GI3 MIR508-201ENST00000384857 115 ntBASIC0.74□□□□□ -2.29
ZNF394Q53GI3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
ZNF394Q53GI3 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.74□□□□□ -2.29
ZNF394Q53GI3 MIR548BB-201ENST00000626714 66 ntBASIC0.74□□□□□ -2.29
ZNF394Q53GI3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
ZNF394Q53GI3 SNORA63.2-201ENST00000362603 126 ntBASIC0.73□□□□□ -2.29
ZNF394Q53GI3 MIR1302-4-201ENST00000408701 150 ntBASIC0.73□□□□□ -2.29
ZNF394Q53GI3 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.73□□□□□ -2.29
ZNF394Q53GI3 MIR5706-201ENST00000579841 80 ntBASIC0.73□□□□□ -2.29
ZNF394Q53GI3 AC093423.1-201ENST00000440817 142 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 171.9 ms