Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 RNU6-955P-201ENST00000410497 104 ntBASIC1.4□□□□□ -2.19
RTP1P59025 AC002429.1-201ENST00000437672 148 ntBASIC1.4□□□□□ -2.19
RTP1P59025 MTRNR2L2-201ENST00000604882 87 ntBASIC1.4□□□□□ -2.19
RTP1P59025 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
RTP1P59025 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
RTP1P59025 Y_RNA.239-201ENST00000364444 113 ntBASIC1.39□□□□□ -2.19
RTP1P59025 SNORD26-201ENST00000384147 75 ntBASIC1.39□□□□□ -2.19
RTP1P59025 MIR222-201ENST00000384992 110 ntBASIC1.39□□□□□ -2.19
RTP1P59025 MIR1827-201ENST00000408549 66 ntBASIC1.39□□□□□ -2.19
RTP1P59025 AC244505.6-201ENST00000452829 130 ntBASIC1.39□□□□□ -2.19
RTP1P59025 Y_RNA.660-201ENST00000516002 120 ntBASIC1.39□□□□□ -2.19
RTP1P59025 RNU6-1265P-201ENST00000516342 103 ntBASIC1.39□□□□□ -2.19
RTP1P59025 RNA5SP327-201ENST00000362494 101 ntBASIC1.38□□□□□ -2.19
RTP1P59025 SNORA25-201ENST00000384384 134 ntBASIC1.38□□□□□ -2.19
RTP1P59025 MIR520H-201ENST00000385126 88 ntBASIC1.38□□□□□ -2.19
RTP1P59025 SNORD77.2-201ENST00000391045 68 ntBASIC1.38□□□□□ -2.19
RTP1P59025 U7.4-201ENST00000614961 63 ntBASIC1.38□□□□□ -2.19
RTP1P59025 MIR150-201ENST00000385048 84 ntBASIC1.37□□□□□ -2.19
RTP1P59025 Y_RNA.596-201ENST00000410462 109 ntBASIC1.37□□□□□ -2.19
RTP1P59025 AC067940.1-201ENST00000458411 300 ntBASIC1.37□□□□□ -2.19
RTP1P59025 snoU13.17-201ENST00000458802 104 ntBASIC1.37□□□□□ -2.19
RTP1P59025 RNA5SP436-201ENST00000516020 115 ntBASIC1.37□□□□□ -2.19
RTP1P59025 SNORA31.14-201ENST00000516728 116 ntBASIC1.37□□□□□ -2.19
RTP1P59025 Y_RNA.788-201ENST00000622394 112 ntBASIC1.37□□□□□ -2.19
RTP1P59025 Y_RNA.32-201ENST00000362589 110 ntBASIC1.36□□□□□ -2.19
RTP1P59025 RNU6-1051P-201ENST00000365471 102 ntBASIC1.36□□□□□ -2.19
RTP1P59025 uc_338.16-201ENST00000621804 95 ntBASIC1.36□□□□□ -2.19
RTP1P59025 RNU6-208P-201ENST00000362431 107 ntBASIC1.35□□□□□ -2.19
RTP1P59025 Y_RNA.264-201ENST00000364665 102 ntBASIC1.35□□□□□ -2.19
RTP1P59025 Y_RNA.532-201ENST00000384590 113 ntBASIC1.35□□□□□ -2.19
RTP1P59025 SCARNA18B-201ENST00000458806 135 ntBASIC1.35□□□□□ -2.19
RTP1P59025 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.35□□□□□ -2.19
RTP1P59025 RNU6-380P-201ENST00000410207 107 ntBASIC1.34□□□□□ -2.19
RTP1P59025 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.34□□□□□ -2.19
RTP1P59025 MIR3140-201ENST00000583685 90 ntBASIC1.34□□□□□ -2.19
RTP1P59025 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.34□□□□□ -2.19
RTP1P59025 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
RTP1P59025 MIR4295-201ENST00000585286 85 ntBASIC1.33□□□□□ -2.2
RTP1P59025 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
RTP1P59025 Y_RNA.174-201ENST00000363781 105 ntBASIC1.32□□□□□ -2.2
RTP1P59025 Y_RNA.207-201ENST00000364142 106 ntBASIC1.32□□□□□ -2.2
RTP1P59025 RNU6-935P-201ENST00000410371 100 ntBASIC1.32□□□□□ -2.2
RTP1P59025 AC087343.1-201ENST00000477341 475 ntBASIC1.32□□□□□ -2.2
RTP1P59025 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.32□□□□□ -2.2
RTP1P59025 MIR26B-201ENST00000362251 77 ntBASIC1.31□□□□□ -2.2
RTP1P59025 Y_RNA.12-201ENST00000362393 112 ntBASIC1.31□□□□□ -2.2
RTP1P59025 Y_RNA.374-201ENST00000365606 101 ntBASIC1.31□□□□□ -2.2
RTP1P59025 Y_RNA.565-201ENST00000384719 101 ntBASIC1.31□□□□□ -2.2
RTP1P59025 SNORD89-201ENST00000390981 114 ntBASIC1.31□□□□□ -2.2
RTP1P59025 MIR4484-201ENST00000582855 83 ntBASIC1.31□□□□□ -2.2
RTP1P59025 RNU5F-1-201ENST00000362507 117 ntBASIC1.3□□□□□ -2.2
RTP1P59025 SNORD115-24-201ENST00000363528 82 ntBASIC1.3□□□□□ -2.2
RTP1P59025 RNA5SP403-201ENST00000363598 108 ntBASIC1.3□□□□□ -2.2
RTP1P59025 RNY4P3-201ENST00000365254 95 ntBASIC1.3□□□□□ -2.2
RTP1P59025 RNU6-287P-201ENST00000516230 98 ntBASIC1.3□□□□□ -2.2
RTP1P59025 MIR19B1-201ENST00000384829 87 ntBASIC1.29□□□□□ -2.2
RTP1P59025 MIR451A-201ENST00000385059 72 ntBASIC1.29□□□□□ -2.2
RTP1P59025 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.29□□□□□ -2.2
RTP1P59025 AC073261.1-201ENST00000429409 121 ntBASIC1.29□□□□□ -2.2
RTP1P59025 AC002350.1-201ENST00000490759 375 ntBASIC1.29□□□□□ -2.2
RTP1P59025 RNU6-1110P-201ENST00000516462 101 ntBASIC1.29□□□□□ -2.2
RTP1P59025 RNU6-303P-201ENST00000517091 106 ntBASIC1.29□□□□□ -2.2
RTP1P59025 MIR3134-201ENST00000579433 74 ntBASIC1.29□□□□□ -2.2
RTP1P59025 YWHAEP2-201ENST00000580066 112 ntBASIC1.29□□□□□ -2.2
RTP1P59025 YWHAEP3-201ENST00000582767 121 ntBASIC1.29□□□□□ -2.2
RTP1P59025 Y_RNA.545-201ENST00000384652 105 ntBASIC1.28□□□□□ -2.2
RTP1P59025 RNU6-1052P-201ENST00000411398 104 ntBASIC1.28□□□□□ -2.2
RTP1P59025 AC074348.1-201ENST00000426503 132 ntBASIC1.28□□□□□ -2.2
RTP1P59025 RNU6-523P-201ENST00000516304 54 ntBASIC1.28□□□□□ -2.2
RTP1P59025 RNU6-719P-201ENST00000516671 104 ntBASIC1.28□□□□□ -2.2
RTP1P59025 RNU7-161P-201ENST00000517289 62 ntBASIC1.28□□□□□ -2.2
RTP1P59025 MIR1297-201ENST00000637311 77 ntBASIC1.28□□□□□ -2.2
RTP1P59025 SNORD115-44-201ENST00000365391 82 ntBASIC1.27□□□□□ -2.21
RTP1P59025 SNORA24B-201ENST00000384176 131 ntBASIC1.27□□□□□ -2.21
RTP1P59025 MIR618-201ENST00000385287 98 ntBASIC1.27□□□□□ -2.21
RTP1P59025 U7.7-201ENST00000459276 60 ntBASIC1.27□□□□□ -2.21
RTP1P59025 RNU7-13P-201ENST00000516413 62 ntBASIC1.27□□□□□ -2.21
RTP1P59025 RNU6-807P-201ENST00000516805 107 ntBASIC1.27□□□□□ -2.21
RTP1P59025 AL136317.1-201ENST00000612653 226 ntBASIC1.27□□□□□ -2.21
RTP1P59025 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.27□□□□□ -2.21
RTP1P59025 MIR644A-201ENST00000385262 94 ntBASIC1.26□□□□□ -2.21
RTP1P59025 SNORD105-201ENST00000386910 85 ntBASIC1.26□□□□□ -2.21
RTP1P59025 FABP5P4-201ENST00000437203 171 ntBASIC1.26□□□□□ -2.21
RTP1P59025 MIR5000-201ENST00000577717 103 ntBASIC1.26□□□□□ -2.21
RTP1P59025 RN7SL793P-201ENST00000583259 296 ntBASIC1.26□□□□□ -2.21
RTP1P59025 SNORA25.8-201ENST00000364831 128 ntBASIC1.25□□□□□ -2.21
RTP1P59025 RNA5SP117-201ENST00000365294 118 ntBASIC1.25□□□□□ -2.21
RTP1P59025 Y_RNA.371-201ENST00000365591 113 ntBASIC1.25□□□□□ -2.21
RTP1P59025 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
RTP1P59025 SNORD124-201ENST00000459577 104 ntBASIC1.25□□□□□ -2.21
RTP1P59025 MIR548AG2-201ENST00000581228 64 ntBASIC1.25□□□□□ -2.21
RTP1P59025 MIR3920-201ENST00000581751 86 ntBASIC1.25□□□□□ -2.21
RTP1P59025 RNU6-340P-201ENST00000364005 107 ntBASIC1.24□□□□□ -2.21
RTP1P59025 RNU6-939P-201ENST00000384634 107 ntBASIC1.24□□□□□ -2.21
RTP1P59025 MIR2113-201ENST00000459007 91 ntBASIC1.24□□□□□ -2.21
RTP1P59025 RNU6-1057P-201ENST00000517162 102 ntBASIC1.24□□□□□ -2.21
RTP1P59025 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
RTP1P59025 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
RTP1P59025 RNU6-1126P-201ENST00000384002 107 ntBASIC1.23□□□□□ -2.21
RTP1P59025 MIR942-201ENST00000401111 86 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 143.3 ms