Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 SCARNA23-201ENST00000516060 130 ntBASIC0.19□□□□□ -2.38
CLDN20P56880 Y_RNA.709-201ENST00000516952 92 ntBASIC0.19□□□□□ -2.38
CLDN20P56880 MTRNR2L2-201ENST00000604882 87 ntBASIC0.19□□□□□ -2.38
CLDN20P56880 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.19□□□□□ -2.38
CLDN20P56880 uc_338.28-201ENST00000612082 187 ntBASIC0.19□□□□□ -2.38
CLDN20P56880 MIR924-201ENST00000638017 53 ntBASIC0.19□□□□□ -2.38
CLDN20P56880 Y_RNA.283-201ENST00000364798 112 ntBASIC0.18□□□□□ -2.38
CLDN20P56880 RNU6-1113P-201ENST00000384348 107 ntBASIC0.18□□□□□ -2.38
CLDN20P56880 RNU6-106P-201ENST00000384405 107 ntBASIC0.18□□□□□ -2.38
CLDN20P56880 SNORA19.1-201ENST00000410656 129 ntBASIC0.18□□□□□ -2.38
CLDN20P56880 snoU13.11-201ENST00000459219 104 ntBASIC0.18□□□□□ -2.38
CLDN20P56880 RNU7-129P-201ENST00000516128 62 ntBASIC0.18□□□□□ -2.38
CLDN20P56880 RNU6-287P-201ENST00000516230 98 ntBASIC0.18□□□□□ -2.38
CLDN20P56880 MIR548AG2-201ENST00000581228 64 ntBASIC0.18□□□□□ -2.38
CLDN20P56880 MIR4514-201ENST00000581410 57 ntBASIC0.18□□□□□ -2.38
CLDN20P56880 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.17□□□□□ -2.38
CLDN20P56880 Y_RNA.205-201ENST00000364128 113 ntBASIC0.17□□□□□ -2.38
CLDN20P56880 Y_RNA.467-201ENST00000384297 102 ntBASIC0.17□□□□□ -2.38
CLDN20P56880 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.17□□□□□ -2.38
CLDN20P56880 RNU6-644P-201ENST00000391155 98 ntBASIC0.17□□□□□ -2.38
CLDN20P56880 RNU6-554P-201ENST00000410466 106 ntBASIC0.17□□□□□ -2.38
CLDN20P56880 RNA5SP484-201ENST00000458857 111 ntBASIC0.17□□□□□ -2.38
CLDN20P56880 MIR2113-201ENST00000459007 91 ntBASIC0.17□□□□□ -2.38
CLDN20P56880 RNU6-795P-201ENST00000516323 103 ntBASIC0.17□□□□□ -2.38
CLDN20P56880 SNORA62.5-201ENST00000516634 120 ntBASIC0.17□□□□□ -2.38
CLDN20P56880 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.17□□□□□ -2.38
CLDN20P56880 AL513043.2-201ENST00000573941 143 ntBASIC0.17□□□□□ -2.38
CLDN20P56880 MIR4777-201ENST00000583710 86 ntBASIC0.17□□□□□ -2.38
CLDN20P56880 AC103810.7-201ENST00000607821 91 ntBASIC0.17□□□□□ -2.38
CLDN20P56880 AC012531.4-201ENST00000616509 177 ntBASIC0.17□□□□□ -2.38
CLDN20P56880 Y_RNA.96-201ENST00000363092 109 ntBASIC0.16□□□□□ -2.38
CLDN20P56880 MIR7-2-201ENST00000384970 110 ntBASIC0.16□□□□□ -2.38
CLDN20P56880 MIR519E-201ENST00000385075 84 ntBASIC0.16□□□□□ -2.38
CLDN20P56880 SNORD110-201ENST00000408189 75 ntBASIC0.16□□□□□ -2.38
CLDN20P56880 AC006210.1-201ENST00000424882 111 ntBASIC0.16□□□□□ -2.38
CLDN20P56880 NAMPTP3-201ENST00000569273 224 ntBASIC0.16□□□□□ -2.38
CLDN20P56880 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.16□□□□□ -2.38
CLDN20P56880 Y_RNA.207-201ENST00000364142 106 ntBASIC0.15□□□□□ -2.39
CLDN20P56880 SNORD101-201ENST00000384027 73 ntBASIC0.15□□□□□ -2.39
CLDN20P56880 SNORA51.5-201ENST00000384126 131 ntBASIC0.15□□□□□ -2.39
CLDN20P56880 RNU6-127P-201ENST00000390897 107 ntBASIC0.15□□□□□ -2.39
CLDN20P56880 RNU6-1232P-201ENST00000516299 86 ntBASIC0.15□□□□□ -2.39
CLDN20P56880 RNU6-537P-201ENST00000517277 103 ntBASIC0.15□□□□□ -2.39
CLDN20P56880 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.15□□□□□ -2.39
CLDN20P56880 SNORA42.1-201ENST00000363515 137 ntBASIC0.14□□□□□ -2.39
CLDN20P56880 RNU1-141P-201ENST00000364623 158 ntBASIC0.14□□□□□ -2.39
CLDN20P56880 RNU6-1325P-201ENST00000364905 105 ntBASIC0.14□□□□□ -2.39
CLDN20P56880 RNU6-756P-201ENST00000383997 107 ntBASIC0.14□□□□□ -2.39
CLDN20P56880 MIR590-201ENST00000385008 97 ntBASIC0.14□□□□□ -2.39
CLDN20P56880 MIR501-201ENST00000390204 84 ntBASIC0.14□□□□□ -2.39
CLDN20P56880 AC093423.1-201ENST00000440817 142 ntBASIC0.14□□□□□ -2.39
CLDN20P56880 Y_RNA.705-201ENST00000516862 110 ntBASIC0.14□□□□□ -2.39
CLDN20P56880 MIR4696-201ENST00000581431 70 ntBASIC0.14□□□□□ -2.39
CLDN20P56880 MIR548Z-201ENST00000584743 97 ntBASIC0.14□□□□□ -2.39
CLDN20P56880 MIR6779-201ENST00000617283 64 ntBASIC0.14□□□□□ -2.39
CLDN20P56880 MIR499B-201ENST00000636498 73 ntBASIC0.14□□□□□ -2.39
CLDN20P56880 MIR330-201ENST00000362196 94 ntBASIC0.13□□□□□ -2.39
CLDN20P56880 MIR548AI-201ENST00000579940 88 ntBASIC0.13□□□□□ -2.39
CLDN20P56880 MIR8087-201ENST00000612745 78 ntBASIC0.13□□□□□ -2.39
CLDN20P56880 Y_RNA.818-201ENST00000618813 71 ntBASIC0.13□□□□□ -2.39
CLDN20P56880 RNU6-664P-201ENST00000362381 107 ntBASIC0.12□□□□□ -2.39
CLDN20P56880 RNU6-766P-201ENST00000362478 107 ntBASIC0.12□□□□□ -2.39
CLDN20P56880 RNU6-1290P-201ENST00000362957 109 ntBASIC0.12□□□□□ -2.39
CLDN20P56880 RNU6-972P-201ENST00000391208 107 ntBASIC0.12□□□□□ -2.39
CLDN20P56880 RNU6-75P-201ENST00000515944 104 ntBASIC0.12□□□□□ -2.39
CLDN20P56880 RNU6-65P-201ENST00000516332 98 ntBASIC0.12□□□□□ -2.39
CLDN20P56880 MIR548AD-201ENST00000584780 82 ntBASIC0.12□□□□□ -2.39
CLDN20P56880 AC023932.2-201ENST00000603176 175 ntBASIC0.12□□□□□ -2.39
CLDN20P56880 MIR6718-201ENST00000616153 80 ntBASIC0.12□□□□□ -2.39
CLDN20P56880 AC069503.3-201ENST00000618674 145 ntBASIC0.12□□□□□ -2.39
CLDN20P56880 U2.22-201ENST00000636441 106 ntBASIC0.12□□□□□ -2.39
CLDN20P56880 Y_RNA.258-201ENST00000364613 105 ntBASIC0.11□□□□□ -2.39
CLDN20P56880 MIR216B-201ENST00000390186 82 ntBASIC0.11□□□□□ -2.39
CLDN20P56880 RNY4P18-201ENST00000391107 89 ntBASIC0.11□□□□□ -2.39
CLDN20P56880 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
CLDN20P56880 RNU6-887P-201ENST00000410660 100 ntBASIC0.11□□□□□ -2.39
CLDN20P56880 RNU6-1057P-201ENST00000517162 102 ntBASIC0.11□□□□□ -2.39
CLDN20P56880 MIR4536-1-201ENST00000583537 88 ntBASIC0.11□□□□□ -2.39
CLDN20P56880 Y_RNA.93-201ENST00000363066 109 ntBASIC0.1□□□□□ -2.39
CLDN20P56880 Y_RNA.107-201ENST00000363190 121 ntBASIC0.1□□□□□ -2.39
CLDN20P56880 Y_RNA.125-201ENST00000363371 111 ntBASIC0.1□□□□□ -2.39
CLDN20P56880 Y_RNA.239-201ENST00000364444 113 ntBASIC0.1□□□□□ -2.39
CLDN20P56880 RNU6-652P-201ENST00000365488 107 ntBASIC0.1□□□□□ -2.39
CLDN20P56880 MIR610-201ENST00000385139 96 ntBASIC0.1□□□□□ -2.39
CLDN20P56880 RNA5SP299-201ENST00000391203 116 ntBASIC0.1□□□□□ -2.39
CLDN20P56880 RNU6-935P-201ENST00000410371 100 ntBASIC0.1□□□□□ -2.39
CLDN20P56880 RNU7-85P-201ENST00000458851 63 ntBASIC0.1□□□□□ -2.39
CLDN20P56880 RNU6-782P-201ENST00000516852 104 ntBASIC0.1□□□□□ -2.39
CLDN20P56880 MIR4677-201ENST00000584153 80 ntBASIC0.1□□□□□ -2.39
CLDN20P56880 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.1□□□□□ -2.39
CLDN20P56880 RNA5SP214-201ENST00000363378 118 ntBASIC0.09□□□□□ -2.4
CLDN20P56880 HMGN2P22-201ENST00000427588 175 ntBASIC0.09□□□□□ -2.4
CLDN20P56880 AL031737.1-201ENST00000450125 223 ntBASIC0.09□□□□□ -2.4
CLDN20P56880 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.09□□□□□ -2.4
CLDN20P56880 MIR4460-201ENST00000577862 86 ntBASIC0.09□□□□□ -2.4
CLDN20P56880 AC104408.1-201ENST00000605241 170 ntBASIC0.09□□□□□ -2.4
CLDN20P56880 Y_RNA.291-201ENST00000364886 113 ntBASIC0.08□□□□□ -2.4
CLDN20P56880 Y_RNA.544-201ENST00000384650 113 ntBASIC0.08□□□□□ -2.4
CLDN20P56880 MIR643-201ENST00000385267 97 ntBASIC0.08□□□□□ -2.4
CLDN20P56880 MT-TY-201ENST00000387409 66 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 185.2 ms