Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.39□□□□□ -2.47
LIM2P55344 U8.6-201ENST00000364939 135 ntBASIC-0.39□□□□□ -2.47
LIM2P55344 RNU6-811P-201ENST00000384069 107 ntBASIC-0.39□□□□□ -2.47
LIM2P55344 RNU6-480P-201ENST00000384332 107 ntBASIC-0.39□□□□□ -2.47
LIM2P55344 RNU6-466P-201ENST00000391224 103 ntBASIC-0.39□□□□□ -2.47
LIM2P55344 RNU6-426P-201ENST00000516464 97 ntBASIC-0.39□□□□□ -2.47
LIM2P55344 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.39□□□□□ -2.47
LIM2P55344 RNA5SP395-201ENST00000516567 118 ntBASIC-0.39□□□□□ -2.47
LIM2P55344 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.39□□□□□ -2.47
LIM2P55344 MIR5589-201ENST00000579442 60 ntBASIC-0.39□□□□□ -2.47
LIM2P55344 MIR548AE1-201ENST00000583292 70 ntBASIC-0.39□□□□□ -2.47
LIM2P55344 AC096720.1-201ENST00000604441 183 ntBASIC-0.39□□□□□ -2.47
LIM2P55344 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.4□□□□□ -2.47
LIM2P55344 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.4□□□□□ -2.47
LIM2P55344 AC244250.2-201ENST00000418731 148 ntBASIC-0.4□□□□□ -2.47
LIM2P55344 MTND4LP9-201ENST00000427694 174 ntBASIC-0.4□□□□□ -2.47
LIM2P55344 MIR4679-2-201ENST00000578358 77 ntBASIC-0.4□□□□□ -2.47
LIM2P55344 RNU6-664P-201ENST00000362381 107 ntBASIC-0.41□□□□□ -2.48
LIM2P55344 RNA5SP205-201ENST00000364653 136 ntBASIC-0.41□□□□□ -2.48
LIM2P55344 SNORD101-201ENST00000384027 73 ntBASIC-0.41□□□□□ -2.48
LIM2P55344 RNU6-154P-201ENST00000384306 106 ntBASIC-0.41□□□□□ -2.48
LIM2P55344 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.41□□□□□ -2.48
LIM2P55344 SNORA40-201ENST00000388090 126 ntBASIC-0.41□□□□□ -2.48
LIM2P55344 AL078595.1-201ENST00000404458 226 ntBASIC-0.41□□□□□ -2.48
LIM2P55344 RNA5SP272-201ENST00000516095 111 ntBASIC-0.41□□□□□ -2.48
LIM2P55344 RNU7-200P-201ENST00000516105 62 ntBASIC-0.41□□□□□ -2.48
LIM2P55344 RNU6-175P-201ENST00000516896 107 ntBASIC-0.41□□□□□ -2.48
LIM2P55344 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.41□□□□□ -2.48
LIM2P55344 MIR4696-201ENST00000581431 70 ntBASIC-0.41□□□□□ -2.48
LIM2P55344 SNORD114-28-201ENST00000363610 72 ntBASIC-0.42□□□□□ -2.48
LIM2P55344 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.42□□□□□ -2.48
LIM2P55344 MIR20A-201ENST00000362279 71 ntBASIC-0.43□□□□□ -2.48
LIM2P55344 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.43□□□□□ -2.48
LIM2P55344 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.43□□□□□ -2.48
LIM2P55344 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.43□□□□□ -2.48
LIM2P55344 SNORD14C-201ENST00000365382 88 ntBASIC-0.43□□□□□ -2.48
LIM2P55344 MIR539-201ENST00000365690 78 ntBASIC-0.43□□□□□ -2.48
LIM2P55344 RNU6-320P-201ENST00000516511 106 ntBASIC-0.43□□□□□ -2.48
LIM2P55344 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.43□□□□□ -2.48
LIM2P55344 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.43□□□□□ -2.48
LIM2P55344 AP001180.6-201ENST00000584918 159 ntBASIC-0.43□□□□□ -2.48
LIM2P55344 RNU6-35P-201ENST00000384530 107 ntBASIC-0.44□□□□□ -2.48
LIM2P55344 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.44□□□□□ -2.48
LIM2P55344 snoU13.11-201ENST00000459219 104 ntBASIC-0.44□□□□□ -2.48
LIM2P55344 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.44□□□□□ -2.48
LIM2P55344 MIR4694-201ENST00000578534 80 ntBASIC-0.44□□□□□ -2.48
LIM2P55344 MIR548O2-201ENST00000616090 70 ntBASIC-0.44□□□□□ -2.48
LIM2P55344 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.45□□□□□ -2.48
LIM2P55344 MIR577-201ENST00000385196 96 ntBASIC-0.45□□□□□ -2.48
LIM2P55344 RNU6-935P-201ENST00000410371 100 ntBASIC-0.45□□□□□ -2.48
LIM2P55344 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.45□□□□□ -2.48
LIM2P55344 AC244090.1-201ENST00000441884 93 ntBASIC-0.45□□□□□ -2.48
LIM2P55344 RNU6-772P-201ENST00000516042 105 ntBASIC-0.45□□□□□ -2.48
LIM2P55344 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.45□□□□□ -2.48
LIM2P55344 RNU6-794P-201ENST00000517261 64 ntBASIC-0.45□□□□□ -2.48
LIM2P55344 MIR4636-201ENST00000582271 80 ntBASIC-0.45□□□□□ -2.48
LIM2P55344 MIR8064-201ENST00000612863 90 ntBASIC-0.45□□□□□ -2.48
LIM2P55344 MIR4788-201ENST00000639104 80 ntBASIC-0.45□□□□□ -2.48
LIM2P55344 AL157777.2-201ENST00000258070 137 ntBASIC-0.46□□□□□ -2.48
LIM2P55344 RNY1P5-201ENST00000383890 115 ntBASIC-0.46□□□□□ -2.48
LIM2P55344 RNU6-257P-201ENST00000410238 98 ntBASIC-0.46□□□□□ -2.48
LIM2P55344 Z95118.1-201ENST00000421372 247 ntBASIC-0.46□□□□□ -2.48
LIM2P55344 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.46□□□□□ -2.48
LIM2P55344 MIR4802-201ENST00000581881 80 ntBASIC-0.46□□□□□ -2.48
LIM2P55344 AL590491.3-201ENST00000610731 82 ntBASIC-0.46□□□□□ -2.48
LIM2P55344 RNU6-832P-201ENST00000363319 107 ntBASIC-0.47□□□□□ -2.48
LIM2P55344 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.47□□□□□ -2.48
LIM2P55344 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.47□□□□□ -2.48
LIM2P55344 MIR652-201ENST00000385278 98 ntBASIC-0.47□□□□□ -2.48
LIM2P55344 U3.27-201ENST00000391237 200 ntBASIC-0.47□□□□□ -2.48
LIM2P55344 MIR4439-201ENST00000583746 80 ntBASIC-0.47□□□□□ -2.48
LIM2P55344 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.47□□□□□ -2.48
LIM2P55344 RNY3P2-201ENST00000362918 102 ntBASIC-0.48□□□□□ -2.49
LIM2P55344 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.49□□□□□ -2.49
LIM2P55344 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.49□□□□□ -2.49
LIM2P55344 MIR1265-201ENST00000408444 86 ntBASIC-0.49□□□□□ -2.49
LIM2P55344 SNORD126-201ENST00000459475 77 ntBASIC-0.49□□□□□ -2.49
LIM2P55344 RNU6-75P-201ENST00000515944 104 ntBASIC-0.49□□□□□ -2.49
LIM2P55344 AC068339.1-201ENST00000526965 141 ntBASIC-0.49□□□□□ -2.49
LIM2P55344 MIR4493-201ENST00000584016 73 ntBASIC-0.49□□□□□ -2.49
LIM2P55344 AL035470.1-201ENST00000622571 220 ntBASIC-0.49□□□□□ -2.49
LIM2P55344 RNA5SP275-201ENST00000363936 118 ntBASIC-0.5□□□□□ -2.49
LIM2P55344 SNORD50.2-201ENST00000365465 70 ntBASIC-0.5□□□□□ -2.49
LIM2P55344 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.5□□□□□ -2.49
LIM2P55344 SNORD2-201ENST00000459163 69 ntBASIC-0.5□□□□□ -2.49
LIM2P55344 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.5□□□□□ -2.49
LIM2P55344 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.5□□□□□ -2.49
LIM2P55344 RNU6-86P-201ENST00000606534 107 ntBASIC-0.5□□□□□ -2.49
LIM2P55344 AC025521.1-201ENST00000621624 286 ntBASIC-0.5□□□□□ -2.49
LIM2P55344 MIR101-1-201ENST00000362265 75 ntBASIC-0.51□□□□□ -2.49
LIM2P55344 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.51□□□□□ -2.49
LIM2P55344 RNU6-455P-201ENST00000384681 107 ntBASIC-0.51□□□□□ -2.49
LIM2P55344 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.51□□□□□ -2.49
LIM2P55344 RNA5SP451-201ENST00000410588 110 ntBASIC-0.51□□□□□ -2.49
LIM2P55344 AC096531.1-201ENST00000419107 107 ntBASIC-0.51□□□□□ -2.49
LIM2P55344 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.51□□□□□ -2.49
LIM2P55344 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.51□□□□□ -2.49
LIM2P55344 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.51□□□□□ -2.49
LIM2P55344 RNU6-758P-201ENST00000516292 89 ntBASIC-0.51□□□□□ -2.49
LIM2P55344 MIR3914-2-201ENST00000637339 95 ntBASIC-0.51□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 217.3 ms