Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 MIR2113-201ENST00000459007 91 ntBASIC1.61□□□□□ -2.15
EPHA4P54764 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.61□□□□□ -2.15
EPHA4P54764 AC002350.1-201ENST00000490759 375 ntBASIC1.61□□□□□ -2.15
EPHA4P54764 RNU6-523P-201ENST00000516304 54 ntBASIC1.61□□□□□ -2.15
EPHA4P54764 AC067863.3-201ENST00000624172 122 ntBASIC1.61□□□□□ -2.15
EPHA4P54764 RNU6-154P-201ENST00000384306 106 ntBASIC1.6□□□□□ -2.15
EPHA4P54764 MIR200A-201ENST00000384875 90 ntBASIC1.6□□□□□ -2.15
EPHA4P54764 SNORA17.3-201ENST00000391159 129 ntBASIC1.6□□□□□ -2.15
EPHA4P54764 RNU7-74P-201ENST00000459104 62 ntBASIC1.6□□□□□ -2.15
EPHA4P54764 RNU6-274P-201ENST00000459566 107 ntBASIC1.6□□□□□ -2.15
EPHA4P54764 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.6□□□□□ -2.15
EPHA4P54764 U6.81-201ENST00000612550 106 ntBASIC1.6□□□□□ -2.15
EPHA4P54764 RNU6-1126P-201ENST00000384002 107 ntBASIC1.59□□□□□ -2.15
EPHA4P54764 RNU7-161P-201ENST00000517289 62 ntBASIC1.59□□□□□ -2.15
EPHA4P54764 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
EPHA4P54764 RNU6-590P-201ENST00000365039 107 ntBASIC1.58□□□□□ -2.16
EPHA4P54764 RNU6-634P-201ENST00000459134 106 ntBASIC1.58□□□□□ -2.16
EPHA4P54764 SNORD53B-201ENST00000577887 78 ntBASIC1.58□□□□□ -2.16
EPHA4P54764 MIR3675-201ENST00000583661 73 ntBASIC1.58□□□□□ -2.16
EPHA4P54764 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
EPHA4P54764 MIR19B1-201ENST00000384829 87 ntBASIC1.57□□□□□ -2.16
EPHA4P54764 MIR617-201ENST00000385030 97 ntBASIC1.57□□□□□ -2.16
EPHA4P54764 MIR548L-201ENST00000408303 86 ntBASIC1.57□□□□□ -2.16
EPHA4P54764 RNU6-687P-201ENST00000516443 89 ntBASIC1.57□□□□□ -2.16
EPHA4P54764 RNU6-539P-201ENST00000516665 103 ntBASIC1.57□□□□□ -2.16
EPHA4P54764 MIR4639-201ENST00000584938 69 ntBASIC1.57□□□□□ -2.16
EPHA4P54764 MIR378A-201ENST00000362177 66 ntBASIC1.56□□□□□ -2.16
EPHA4P54764 MIR3920-201ENST00000581751 86 ntBASIC1.56□□□□□ -2.16
EPHA4P54764 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.56□□□□□ -2.16
EPHA4P54764 MIR4773-1-201ENST00000637203 78 ntBASIC1.56□□□□□ -2.16
EPHA4P54764 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
EPHA4P54764 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.55□□□□□ -2.16
EPHA4P54764 RNU6-824P-201ENST00000363724 104 ntBASIC1.55□□□□□ -2.16
EPHA4P54764 RNA5SP363-201ENST00000365072 115 ntBASIC1.55□□□□□ -2.16
EPHA4P54764 RNU6-1241P-201ENST00000384536 107 ntBASIC1.55□□□□□ -2.16
EPHA4P54764 RNU6-752P-201ENST00000516376 102 ntBASIC1.55□□□□□ -2.16
EPHA4P54764 MIR4498-201ENST00000577599 66 ntBASIC1.55□□□□□ -2.16
EPHA4P54764 AC025627.3-201ENST00000582078 182 ntBASIC1.55□□□□□ -2.16
EPHA4P54764 AL078603.1-201ENST00000603824 313 ntBASIC1.55□□□□□ -2.16
EPHA4P54764 MIR664A-201ENST00000626086 82 ntBASIC1.55□□□□□ -2.16
EPHA4P54764 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
EPHA4P54764 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
EPHA4P54764 SNORA25.8-201ENST00000364831 128 ntBASIC1.54□□□□□ -2.16
EPHA4P54764 MIR517C-201ENST00000385103 95 ntBASIC1.54□□□□□ -2.16
EPHA4P54764 MIR644A-201ENST00000385262 94 ntBASIC1.54□□□□□ -2.16
EPHA4P54764 MIR4303-201ENST00000581299 66 ntBASIC1.54□□□□□ -2.16
EPHA4P54764 BX248123.2-201ENST00000606318 124 ntBASIC1.54□□□□□ -2.16
EPHA4P54764 snoU13.31-201ENST00000607291 104 ntBASIC1.54□□□□□ -2.16
EPHA4P54764 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.54□□□□□ -2.16
EPHA4P54764 SNORA7.1-201ENST00000363750 139 ntBASIC1.53□□□□□ -2.16
EPHA4P54764 Y_RNA.338-201ENST00000365320 114 ntBASIC1.53□□□□□ -2.16
EPHA4P54764 RNU6-997P-201ENST00000384725 107 ntBASIC1.53□□□□□ -2.16
EPHA4P54764 RNU4-62P-201ENST00000410125 130 ntBASIC1.53□□□□□ -2.16
EPHA4P54764 RNU1-123P-201ENST00000458950 160 ntBASIC1.53□□□□□ -2.16
EPHA4P54764 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
EPHA4P54764 RNU6-330P-201ENST00000363015 107 ntBASIC1.52□□□□□ -2.17
EPHA4P54764 RNU6-649P-201ENST00000384463 107 ntBASIC1.52□□□□□ -2.17
EPHA4P54764 SNORA67.6-201ENST00000391093 99 ntBASIC1.52□□□□□ -2.17
EPHA4P54764 AP1B1P2-201ENST00000416196 106 ntBASIC1.51□□□□□ -2.17
EPHA4P54764 MIR8053-201ENST00000613344 75 ntBASIC1.51□□□□□ -2.17
EPHA4P54764 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.51□□□□□ -2.17
EPHA4P54764 AC244669.1-204ENST00000621564 178 ntBASIC1.51□□□□□ -2.17
EPHA4P54764 SNORD26-201ENST00000384147 75 ntBASIC1.5□□□□□ -2.17
EPHA4P54764 SNORD28-201ENST00000384706 75 ntBASIC1.5□□□□□ -2.17
EPHA4P54764 MIR573-201ENST00000384964 99 ntBASIC1.5□□□□□ -2.17
EPHA4P54764 SNORD30.1-201ENST00000391309 70 ntBASIC1.5□□□□□ -2.17
EPHA4P54764 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.5□□□□□ -2.17
EPHA4P54764 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.5□□□□□ -2.17
EPHA4P54764 MIR548AG2-201ENST00000581228 64 ntBASIC1.5□□□□□ -2.17
EPHA4P54764 SNORD114-24-201ENST00000365029 72 ntBASIC1.49□□□□□ -2.17
EPHA4P54764 RNU6-382P-201ENST00000365181 106 ntBASIC1.49□□□□□ -2.17
EPHA4P54764 RNU6-895P-201ENST00000384125 103 ntBASIC1.49□□□□□ -2.17
EPHA4P54764 RPS29P23-201ENST00000458635 123 ntBASIC1.49□□□□□ -2.17
EPHA4P54764 SNORA31.24-201ENST00000517232 57 ntBASIC1.49□□□□□ -2.17
EPHA4P54764 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.49□□□□□ -2.17
EPHA4P54764 RNU1-42P-201ENST00000364033 160 ntBASIC1.48□□□□□ -2.17
EPHA4P54764 MIR519E-201ENST00000385075 84 ntBASIC1.48□□□□□ -2.17
EPHA4P54764 SNORD75.2-201ENST00000408784 58 ntBASIC1.48□□□□□ -2.17
EPHA4P54764 AC244098.3-201ENST00000424803 96 ntBASIC1.48□□□□□ -2.17
EPHA4P54764 AL691482.2-201ENST00000457453 84 ntBASIC1.48□□□□□ -2.17
EPHA4P54764 SNORD124-201ENST00000459577 104 ntBASIC1.48□□□□□ -2.17
EPHA4P54764 RNU6-1053P-201ENST00000515930 101 ntBASIC1.48□□□□□ -2.17
EPHA4P54764 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.48□□□□□ -2.17
EPHA4P54764 RNU7-95P-201ENST00000459222 64 ntBASIC1.47□□□□□ -2.17
EPHA4P54764 Y_RNA.676-201ENST00000516393 96 ntBASIC1.47□□□□□ -2.17
EPHA4P54764 MIR3612-201ENST00000579753 87 ntBASIC1.47□□□□□ -2.17
EPHA4P54764 SNORD45.1-201ENST00000363181 77 ntBASIC1.46□□□□□ -2.18
EPHA4P54764 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.46□□□□□ -2.18
EPHA4P54764 SNORD18A-201ENST00000363753 72 ntBASIC1.45□□□□□ -2.18
EPHA4P54764 SNORD41.1-201ENST00000391000 69 ntBASIC1.45□□□□□ -2.18
EPHA4P54764 RNU6-663P-201ENST00000391105 106 ntBASIC1.45□□□□□ -2.18
EPHA4P54764 MIR1323-201ENST00000408090 73 ntBASIC1.45□□□□□ -2.18
EPHA4P54764 RNU7-24P-201ENST00000458867 62 ntBASIC1.45□□□□□ -2.18
EPHA4P54764 RNU1-92P-201ENST00000517017 135 ntBASIC1.45□□□□□ -2.18
EPHA4P54764 MIR548O2-201ENST00000616090 70 ntBASIC1.45□□□□□ -2.18
EPHA4P54764 MIR618-201ENST00000385287 98 ntBASIC1.44□□□□□ -2.18
EPHA4P54764 AC125388.1-201ENST00000459631 156 ntBASIC1.44□□□□□ -2.18
EPHA4P54764 MIR3678-201ENST00000578455 94 ntBASIC1.44□□□□□ -2.18
EPHA4P54764 RNU1-124P-201ENST00000363861 145 ntBASIC1.43□□□□□ -2.18
EPHA4P54764 Y_RNA.258-201ENST00000364613 105 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 224 ms