Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 SNORA36.2-201ENST00000384004 127 ntBASIC0.68□□□□□ -2.3
COPB1P53618 RNU6-466P-201ENST00000391224 103 ntBASIC0.68□□□□□ -2.3
COPB1P53618 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.68□□□□□ -2.3
COPB1P53618 RNA5SP170-201ENST00000517150 101 ntBASIC0.68□□□□□ -2.3
COPB1P53618 AC026421.1-201ENST00000519101 163 ntBASIC0.68□□□□□ -2.3
COPB1P53618 MIR5582-201ENST00000579697 68 ntBASIC0.68□□□□□ -2.3
COPB1P53618 RNU6-844P-201ENST00000517175 102 ntBASIC0.67□□□□□ -2.3
COPB1P53618 MIR3920-201ENST00000581751 86 ntBASIC0.67□□□□□ -2.3
COPB1P53618 U6.100-201ENST00000636230 99 ntBASIC0.67□□□□□ -2.3
COPB1P53618 AC010487.4-201ENST00000637027 61 ntBASIC0.67□□□□□ -2.3
COPB1P53618 RNU6-726P-201ENST00000364680 107 ntBASIC0.66□□□□□ -2.3
COPB1P53618 Y_RNA.369-201ENST00000365568 117 ntBASIC0.66□□□□□ -2.3
COPB1P53618 SNORD41.1-201ENST00000391000 69 ntBASIC0.66□□□□□ -2.3
COPB1P53618 RNU6-519P-201ENST00000410590 108 ntBASIC0.66□□□□□ -2.3
COPB1P53618 Y_RNA.609-201ENST00000410669 89 ntBASIC0.66□□□□□ -2.3
COPB1P53618 RNU7-104P-201ENST00000459398 79 ntBASIC0.66□□□□□ -2.3
COPB1P53618 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.66□□□□□ -2.3
COPB1P53618 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.66□□□□□ -2.3
COPB1P53618 AC067863.3-201ENST00000624172 122 ntBASIC0.66□□□□□ -2.3
COPB1P53618 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.65□□□□□ -2.3
COPB1P53618 RNA5SP517-201ENST00000364724 117 ntBASIC0.65□□□□□ -2.31
COPB1P53618 MIR92A1-201ENST00000385233 78 ntBASIC0.65□□□□□ -2.31
COPB1P53618 MIR936-201ENST00000401264 98 ntBASIC0.65□□□□□ -2.31
COPB1P53618 RNA5SP268-201ENST00000516828 124 ntBASIC0.65□□□□□ -2.31
COPB1P53618 MIR4536-1-201ENST00000583537 88 ntBASIC0.65□□□□□ -2.31
COPB1P53618 MIR5087-201ENST00000635826 76 ntBASIC0.65□□□□□ -2.31
COPB1P53618 Y_RNA.596-201ENST00000410462 109 ntBASIC0.64□□□□□ -2.31
COPB1P53618 RNU6-65P-201ENST00000516332 98 ntBASIC0.64□□□□□ -2.31
COPB1P53618 RNU7-13P-201ENST00000516413 62 ntBASIC0.64□□□□□ -2.31
COPB1P53618 SNORD115-44-201ENST00000365391 82 ntBASIC0.63□□□□□ -2.31
COPB1P53618 SNORA8.2-201ENST00000384372 139 ntBASIC0.63□□□□□ -2.31
COPB1P53618 MIR548AG2-201ENST00000581228 64 ntBASIC0.63□□□□□ -2.31
COPB1P53618 MIR4696-201ENST00000581431 70 ntBASIC0.63□□□□□ -2.31
COPB1P53618 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.63□□□□□ -2.31
COPB1P53618 RNU6-664P-201ENST00000362381 107 ntBASIC0.62□□□□□ -2.31
COPB1P53618 RNU6-132P-201ENST00000383863 107 ntBASIC0.62□□□□□ -2.31
COPB1P53618 MIR7107-201ENST00000611489 80 ntBASIC0.62□□□□□ -2.31
COPB1P53618 AC092634.7-201ENST00000621022 103 ntBASIC0.62□□□□□ -2.31
COPB1P53618 MIR924-201ENST00000638017 53 ntBASIC0.62□□□□□ -2.31
COPB1P53618 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
COPB1P53618 Y_RNA.207-201ENST00000364142 106 ntBASIC0.61□□□□□ -2.31
COPB1P53618 RNU6-219P-201ENST00000364728 107 ntBASIC0.61□□□□□ -2.31
COPB1P53618 RNU6-716P-201ENST00000365621 103 ntBASIC0.61□□□□□ -2.31
COPB1P53618 RNU6-1126P-201ENST00000384002 107 ntBASIC0.61□□□□□ -2.31
COPB1P53618 SNORD116-22-201ENST00000384430 92 ntBASIC0.61□□□□□ -2.31
COPB1P53618 Y_RNA.620-201ENST00000411009 88 ntBASIC0.61□□□□□ -2.31
COPB1P53618 RNA5SP227-201ENST00000516184 113 ntBASIC0.61□□□□□ -2.31
COPB1P53618 RNU6-287P-201ENST00000516230 98 ntBASIC0.61□□□□□ -2.31
COPB1P53618 MIR4668-201ENST00000582284 70 ntBASIC0.61□□□□□ -2.31
COPB1P53618 uc_338.17-201ENST00000619633 179 ntBASIC0.61□□□□□ -2.31
COPB1P53618 AC243829.3-201ENST00000622177 108 ntBASIC0.61□□□□□ -2.31
COPB1P53618 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
COPB1P53618 Y_RNA.43-201ENST00000362670 111 ntBASIC0.6□□□□□ -2.31
COPB1P53618 RNU6-1255P-201ENST00000363434 112 ntBASIC0.6□□□□□ -2.31
COPB1P53618 SNORD118-201ENST00000363593 134 ntBASIC0.6□□□□□ -2.31
COPB1P53618 RNU6-497P-201ENST00000365316 104 ntBASIC0.6□□□□□ -2.31
COPB1P53618 SNORD101-201ENST00000384027 73 ntBASIC0.6□□□□□ -2.31
COPB1P53618 MIR3064-201ENST00000581130 66 ntBASIC0.6□□□□□ -2.31
COPB1P53618 AL162376.1-201ENST00000624117 175 ntBASIC0.6□□□□□ -2.31
COPB1P53618 MIRLET7F1-201ENST00000362202 87 ntBASIC0.59□□□□□ -2.31
COPB1P53618 RNU6-294P-201ENST00000364999 102 ntBASIC0.59□□□□□ -2.31
COPB1P53618 RNU6-402P-201ENST00000410678 103 ntBASIC0.59□□□□□ -2.31
COPB1P53618 SNORA40.8-201ENST00000411034 126 ntBASIC0.59□□□□□ -2.31
COPB1P53618 AL157398.1-201ENST00000452981 186 ntBASIC0.59□□□□□ -2.31
COPB1P53618 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.59□□□□□ -2.31
COPB1P53618 RNU6-633P-201ENST00000362612 103 ntBASIC0.58□□□□□ -2.32
COPB1P53618 RNA5SP457-201ENST00000363657 124 ntBASIC0.58□□□□□ -2.32
COPB1P53618 RNU6-675P-201ENST00000384236 104 ntBASIC0.58□□□□□ -2.32
COPB1P53618 MIR617-201ENST00000385030 97 ntBASIC0.58□□□□□ -2.32
COPB1P53618 MIR2113-201ENST00000459007 91 ntBASIC0.58□□□□□ -2.32
COPB1P53618 MIR4711-201ENST00000578274 70 ntBASIC0.58□□□□□ -2.32
COPB1P53618 Y_RNA.17-201ENST00000362433 111 ntBASIC0.57□□□□□ -2.32
COPB1P53618 SNORD115-27-201ENST00000364430 82 ntBASIC0.57□□□□□ -2.32
COPB1P53618 RNU6-945P-201ENST00000383947 107 ntBASIC0.57□□□□□ -2.32
COPB1P53618 RNU6-811P-201ENST00000384069 107 ntBASIC0.57□□□□□ -2.32
COPB1P53618 MIR518A1-201ENST00000385068 85 ntBASIC0.57□□□□□ -2.32
COPB1P53618 MIR519E-201ENST00000385075 84 ntBASIC0.57□□□□□ -2.32
COPB1P53618 RNA5SP292-201ENST00000390974 118 ntBASIC0.57□□□□□ -2.32
COPB1P53618 RNU6-269P-201ENST00000391077 97 ntBASIC0.57□□□□□ -2.32
COPB1P53618 Y_RNA.593-201ENST00000410292 98 ntBASIC0.57□□□□□ -2.32
COPB1P53618 RN7SKP12-201ENST00000516275 143 ntBASIC0.57□□□□□ -2.32
COPB1P53618 RNU6-267P-201ENST00000516714 103 ntBASIC0.57□□□□□ -2.32
COPB1P53618 AC018659.1-201ENST00000551083 169 ntBASIC0.57□□□□□ -2.32
COPB1P53618 AC104996.3-201ENST00000590718 94 ntBASIC0.57□□□□□ -2.32
COPB1P53618 SNORA25.18-201ENST00000607153 114 ntBASIC0.57□□□□□ -2.32
COPB1P53618 MIR548U-201ENST00000390728 81 ntBASIC0.56□□□□□ -2.32
COPB1P53618 MIR548L-201ENST00000408303 86 ntBASIC0.56□□□□□ -2.32
COPB1P53618 AC098934.3-201ENST00000430450 190 ntBASIC0.56□□□□□ -2.32
COPB1P53618 RNU4-54P-201ENST00000516428 129 ntBASIC0.56□□□□□ -2.32
COPB1P53618 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.56□□□□□ -2.32
COPB1P53618 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
COPB1P53618 Y_RNA.115-201ENST00000363272 98 ntBASIC0.55□□□□□ -2.32
COPB1P53618 RNU4-32P-201ENST00000363404 141 ntBASIC0.55□□□□□ -2.32
COPB1P53618 RNA5SP499-201ENST00000363982 119 ntBASIC0.55□□□□□ -2.32
COPB1P53618 Y_RNA.239-201ENST00000364444 113 ntBASIC0.55□□□□□ -2.32
COPB1P53618 RNU6-1134P-201ENST00000365156 101 ntBASIC0.55□□□□□ -2.32
COPB1P53618 Y_RNA.374-201ENST00000365606 101 ntBASIC0.55□□□□□ -2.32
COPB1P53618 RNU6-935P-201ENST00000410371 100 ntBASIC0.55□□□□□ -2.32
COPB1P53618 AC093423.1-201ENST00000440817 142 ntBASIC0.55□□□□□ -2.32
COPB1P53618 RNU6-509P-201ENST00000363519 107 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 294.8 ms