Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 RNU7-90P-201ENST00000459216 62 ntBASIC1.43□□□□□ -2.18
CDR1P51861 MIR4804-201ENST00000581683 73 ntBASIC1.43□□□□□ -2.18
CDR1P51861 MIR3140-201ENST00000583685 90 ntBASIC1.43□□□□□ -2.18
CDR1P51861 AL353770.2-201ENST00000620024 78 ntBASIC1.43□□□□□ -2.18
CDR1P51861 MIR664A-201ENST00000626086 82 ntBASIC1.43□□□□□ -2.18
CDR1P51861 RNU6-340P-201ENST00000364005 107 ntBASIC1.42□□□□□ -2.18
CDR1P51861 RNU6-587P-201ENST00000391282 106 ntBASIC1.42□□□□□ -2.18
CDR1P51861 MIR942-201ENST00000401111 86 ntBASIC1.42□□□□□ -2.18
CDR1P51861 RNU6-994P-201ENST00000410507 111 ntBASIC1.42□□□□□ -2.18
CDR1P51861 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.42□□□□□ -2.18
CDR1P51861 SNORD79.1-201ENST00000516069 84 ntBASIC1.42□□□□□ -2.18
CDR1P51861 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.42□□□□□ -2.18
CDR1P51861 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CDR1P51861 SNORD114-27-201ENST00000363766 70 ntBASIC1.41□□□□□ -2.18
CDR1P51861 SNORD114-22-201ENST00000365423 72 ntBASIC1.41□□□□□ -2.18
CDR1P51861 SNORA24B-201ENST00000384176 131 ntBASIC1.41□□□□□ -2.18
CDR1P51861 RNU6-154P-201ENST00000384306 106 ntBASIC1.41□□□□□ -2.18
CDR1P51861 Y_RNA.540-201ENST00000384638 111 ntBASIC1.41□□□□□ -2.18
CDR1P51861 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
CDR1P51861 RNU7-56P-201ENST00000458744 62 ntBASIC1.41□□□□□ -2.18
CDR1P51861 RNU6-977P-201ENST00000516411 103 ntBASIC1.41□□□□□ -2.18
CDR1P51861 RMST_2.1-201ENST00000617263 136 ntBASIC1.41□□□□□ -2.18
CDR1P51861 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
CDR1P51861 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CDR1P51861 Y_RNA.371-201ENST00000365591 113 ntBASIC1.4□□□□□ -2.19
CDR1P51861 MIR7-2-201ENST00000384970 110 ntBASIC1.4□□□□□ -2.19
CDR1P51861 MIR451A-201ENST00000385059 72 ntBASIC1.4□□□□□ -2.19
CDR1P51861 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.4□□□□□ -2.19
CDR1P51861 RNU2-59P-201ENST00000410482 191 ntBASIC1.4□□□□□ -2.19
CDR1P51861 Y_RNA.606-201ENST00000410579 103 ntBASIC1.4□□□□□ -2.19
CDR1P51861 RNA5SP220-201ENST00000516298 104 ntBASIC1.4□□□□□ -2.19
CDR1P51861 AL078603.1-201ENST00000603824 313 ntBASIC1.4□□□□□ -2.19
CDR1P51861 SNORA8.1-201ENST00000384250 140 ntBASIC1.39□□□□□ -2.19
CDR1P51861 RNU1-119P-201ENST00000391122 165 ntBASIC1.39□□□□□ -2.19
CDR1P51861 AC097510.1-201ENST00000510945 133 ntBASIC1.39□□□□□ -2.19
CDR1P51861 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.39□□□□□ -2.19
CDR1P51861 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CDR1P51861 RNU6-330P-201ENST00000363015 107 ntBASIC1.38□□□□□ -2.19
CDR1P51861 RNU6-681P-201ENST00000364012 104 ntBASIC1.38□□□□□ -2.19
CDR1P51861 RNU6-1241P-201ENST00000384536 107 ntBASIC1.38□□□□□ -2.19
CDR1P51861 MIR100-201ENST00000385259 80 ntBASIC1.38□□□□□ -2.19
CDR1P51861 U6.81-201ENST00000612550 106 ntBASIC1.38□□□□□ -2.19
CDR1P51861 MIR1-1-201ENST00000362147 71 ntBASIC1.37□□□□□ -2.19
CDR1P51861 SNORD115-44-201ENST00000365391 82 ntBASIC1.37□□□□□ -2.19
CDR1P51861 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.37□□□□□ -2.19
CDR1P51861 RNU6-1052P-201ENST00000411398 104 ntBASIC1.37□□□□□ -2.19
CDR1P51861 RNU6-719P-201ENST00000516671 104 ntBASIC1.37□□□□□ -2.19
CDR1P51861 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.37□□□□□ -2.19
CDR1P51861 MIR6734-201ENST00000621166 68 ntBASIC1.37□□□□□ -2.19
CDR1P51861 uc_338.16-201ENST00000621804 95 ntBASIC1.37□□□□□ -2.19
CDR1P51861 Y_RNA.32-201ENST00000362589 110 ntBASIC1.36□□□□□ -2.19
CDR1P51861 RNU6-824P-201ENST00000363724 104 ntBASIC1.36□□□□□ -2.19
CDR1P51861 Y_RNA.174-201ENST00000363781 105 ntBASIC1.36□□□□□ -2.19
CDR1P51861 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
CDR1P51861 SNORD12-201ENST00000391002 90 ntBASIC1.36□□□□□ -2.19
CDR1P51861 U3.27-201ENST00000391237 200 ntBASIC1.36□□□□□ -2.19
CDR1P51861 RNU6-287P-201ENST00000516230 98 ntBASIC1.36□□□□□ -2.19
CDR1P51861 SNORA31.14-201ENST00000516728 116 ntBASIC1.36□□□□□ -2.19
CDR1P51861 SNORA70.22-201ENST00000517160 124 ntBASIC1.36□□□□□ -2.19
CDR1P51861 RNU6-1057P-201ENST00000517162 102 ntBASIC1.36□□□□□ -2.19
CDR1P51861 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.36□□□□□ -2.19
CDR1P51861 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
CDR1P51861 MIR520F-201ENST00000384824 87 ntBASIC1.35□□□□□ -2.19
CDR1P51861 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
CDR1P51861 MIR1827-201ENST00000408549 66 ntBASIC1.35□□□□□ -2.19
CDR1P51861 AC068338.1-201ENST00000565567 176 ntBASIC1.35□□□□□ -2.19
CDR1P51861 MIR6078-201ENST00000611069 100 ntBASIC1.35□□□□□ -2.19
CDR1P51861 MIR96-201ENST00000362288 78 ntBASIC1.34□□□□□ -2.19
CDR1P51861 RNU6-649P-201ENST00000384463 107 ntBASIC1.34□□□□□ -2.19
CDR1P51861 RNU6-540P-201ENST00000384622 101 ntBASIC1.34□□□□□ -2.19
CDR1P51861 RNU6-939P-201ENST00000384634 107 ntBASIC1.34□□□□□ -2.19
CDR1P51861 MIR154-201ENST00000385243 84 ntBASIC1.34□□□□□ -2.19
CDR1P51861 SNORA40.6-201ENST00000391153 128 ntBASIC1.34□□□□□ -2.19
CDR1P51861 AC067940.1-201ENST00000458411 300 ntBASIC1.34□□□□□ -2.19
CDR1P51861 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.34□□□□□ -2.19
CDR1P51861 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
CDR1P51861 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.33□□□□□ -2.2
CDR1P51861 RNA5SP403-201ENST00000363598 108 ntBASIC1.33□□□□□ -2.2
CDR1P51861 MIR2113-201ENST00000459007 91 ntBASIC1.33□□□□□ -2.2
CDR1P51861 RNU7-13P-201ENST00000516413 62 ntBASIC1.33□□□□□ -2.2
CDR1P51861 MIR3675-201ENST00000583661 73 ntBASIC1.33□□□□□ -2.2
CDR1P51861 SNORD115-24-201ENST00000363528 82 ntBASIC1.32□□□□□ -2.2
CDR1P51861 SNORD115-31-201ENST00000365318 82 ntBASIC1.32□□□□□ -2.2
CDR1P51861 RNU6-1177P-201ENST00000391058 104 ntBASIC1.32□□□□□ -2.2
CDR1P51861 RNA5SP480-201ENST00000516840 109 ntBASIC1.32□□□□□ -2.2
CDR1P51861 RNU6-1126P-201ENST00000384002 107 ntBASIC1.31□□□□□ -2.2
CDR1P51861 SNORD30.1-201ENST00000391309 70 ntBASIC1.31□□□□□ -2.2
CDR1P51861 AC002429.1-201ENST00000437672 148 ntBASIC1.31□□□□□ -2.2
CDR1P51861 RNU7-161P-201ENST00000517289 62 ntBASIC1.31□□□□□ -2.2
CDR1P51861 MIR3660-201ENST00000584845 100 ntBASIC1.31□□□□□ -2.2
CDR1P51861 Y_RNA.386-201ENST00000383913 105 ntBASIC1.3□□□□□ -2.2
CDR1P51861 AC125388.1-201ENST00000459631 156 ntBASIC1.3□□□□□ -2.2
CDR1P51861 MIR548AG2-201ENST00000581228 64 ntBASIC1.3□□□□□ -2.2
CDR1P51861 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.3□□□□□ -2.2
CDR1P51861 Y_RNA.258-201ENST00000364613 105 ntBASIC1.29□□□□□ -2.2
CDR1P51861 MIR222-201ENST00000384992 110 ntBASIC1.29□□□□□ -2.2
CDR1P51861 MIR1285-1-201ENST00000408593 84 ntBASIC1.29□□□□□ -2.2
CDR1P51861 MIR3920-201ENST00000581751 86 ntBASIC1.29□□□□□ -2.2
CDR1P51861 AC022709.1-201ENST00000615967 87 ntBASIC1.29□□□□□ -2.2
CDR1P51861 U6.111-201ENST00000636093 83 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 168.5 ms